RNA–Protein interactions for RNA: ENST00000236273.8

SYF2-201, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYF2, Length 1,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-201ENST00000236273 LINC00242Q5T6M2 205 aa14.33□□□□□ -0.12
SYF2-201ENST00000236273 AP5S1Q9NUS5 200 aa14.33□□□□□ -0.12
SYF2-201ENST00000236273 COX6A2Q02221 97 aa14.32□□□□□ -0.12
SYF2-201ENST00000236273 TIMM17AQ99595 171 aa14.32□□□□□ -0.12
SYF2-201ENST00000236273 G0S2P27469 103 aa14.31□□□□□ -0.12
SYF2-201ENST00000236273 UBE2D1P51668 147 aa14.31□□□□□ -0.12
SYF2-201ENST00000236273 TEX43Q6ZNM6 134 aa14.31□□□□□ -0.12
SYF2-201ENST00000236273 PANO1I0J062 215 aa14.3□□□□□ -0.12
SYF2-201ENST00000236273 SMR3BP02814 79 aaPredicted RBP14.3□□□□□ -0.12
SYF2-201ENST00000236273 FA2HQ7L5A8 372 aa14.3□□□□□ -0.12
SYF2-201ENST00000236273 A0A096LNJ9 63 aa14.29□□□□□ -0.12
SYF2-201ENST00000236273 ERASQ7Z444 233 aa14.29□□□□□ -0.12
SYF2-201ENST00000236273 CHAC1Q9BUX1 264 aa14.29□□□□□ -0.12
SYF2-201ENST00000236273 VCX2Q9H322 139 aa14.29□□□□□ -0.12
SYF2-201ENST00000236273 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.28□□□□□ -0.12
SYF2-201ENST00000236273 SCXQ7RTU7 201 aa14.28□□□□□ -0.12
SYF2-201ENST00000236273 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.28□□□□□ -0.12
SYF2-201ENST00000236273 LINC00614P0C842 121 aa14.27□□□□□ -0.12
SYF2-201ENST00000236273 MALP21145 153 aa14.27□□□□□ -0.12
SYF2-201ENST00000236273 FAM19A3Q7Z5A8 133 aa14.27□□□□□ -0.12
SYF2-201ENST00000236273 SCGB3A1Q96QR1 104 aa14.27□□□□□ -0.12
SYF2-201ENST00000236273 Q6ZN92 141 aa14.26□□□□□ -0.13
SYF2-201ENST00000236273 CIRBP-AS1Q8TBR5 109 aa14.26□□□□□ -0.13
SYF2-201ENST00000236273 IGLV4-69A0A075B6H9 119 aa14.25□□□□□ -0.13
SYF2-201ENST00000236273 IGHV3-64A0A075B6Q5 118 aa14.25□□□□□ -0.13
SYF2-201ENST00000236273 COLCA2A8K830 154 aa14.25□□□□□ -0.13
SYF2-201ENST00000236273 CIRBPQ14011 172 aaKnown RBP14.25□□□□□ -0.13
SYF2-201ENST00000236273 VPS13BQ7Z7G8 4022 aa14.25□□□□□ -0.13
SYF2-201ENST00000236273 A0A087WZ39 114 aa14.24□□□□□ -0.13
SYF2-201ENST00000236273 ZNF561-AS1K7EIQ3 104 aa14.24□□□□□ -0.13
SYF2-201ENST00000236273 C2orf88Q9BSF0 95 aa14.24□□□□□ -0.13
SYF2-201ENST00000236273 LINC01549A6NIU2 74 aa14.23□□□□□ -0.13
SYF2-201ENST00000236273 APOMO95445 188 aa14.22□□□□□ -0.13
SYF2-201ENST00000236273 TRGC2P03986 189 aa14.22□□□□□ -0.13
SYF2-201ENST00000236273 PAPPA-AS1Q5QFB9 102 aa14.22□□□□□ -0.13
SYF2-201ENST00000236273 SYCNQ0VAF6 134 aa14.21□□□□□ -0.13
SYF2-201ENST00000236273 PMCHL1Q16048 86 aa14.21□□□□□ -0.13
SYF2-201ENST00000236273 OR10D4PQ8NGN7 298 aa14.21□□□□□ -0.13
SYF2-201ENST00000236273 CHTF8P0CG12 524 aa14.2□□□□□ -0.14
SYF2-201ENST00000236273 KIAA0087Q14695 138 aa14.2□□□□□ -0.14
SYF2-201ENST00000236273 Q6ZRU5 148 aa14.2□□□□□ -0.14
SYF2-201ENST00000236273 C2orf48Q96LS8 159 aa14.2□□□□□ -0.14
SYF2-201ENST00000236273 EPM2AB3EWF7 344 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 SCO1O75880 301 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 SPAG11BQ08648 103 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 PDZD11Q5EBL8 140 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 Q5VSD8 79 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 ORAOV1Q8WV07 137 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 CARD19Q96LW7 228 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 CST9LQ9H4G1 147 aa14.19□□□□□ -0.14
SYF2-201ENST00000236273 A0A0J9YXV3 536 aa14.18□□□□□ -0.14
SYF2-201ENST00000236273 RAB5BP61020 215 aa14.18□□□□□ -0.14
SYF2-201ENST00000236273 LINC01561Q8N1V8 128 aa14.18□□□□□ -0.14
SYF2-201ENST00000236273 HBDP02042 147 aa14.17□□□□□ -0.14
SYF2-201ENST00000236273 SPACA4Q8TDM5 124 aa14.17□□□□□ -0.14
SYF2-201ENST00000236273 SRRM2Q9UQ35 2752 aaKnown RBP14.17□□□□□ -0.14
SYF2-201ENST00000236273 CAMK2N2Q96S95 79 aa14.16□□□□□ -0.14
SYF2-201ENST00000236273 CDKN2A-AS1Q9UH64 79 aa14.16□□□□□ -0.14
SYF2-201ENST00000236273 A0A096LNI7 61 aa14.15□□□□□ -0.15
SYF2-201ENST00000236273 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.15□□□□□ -0.15
SYF2-201ENST00000236273 HERVK_113P63121 156 aa14.15□□□□□ -0.15
SYF2-201ENST00000236273 PMVKQ15126 192 aa14.15□□□□□ -0.15
SYF2-201ENST00000236273 C10orf25Q5T742 122 aa14.15□□□□□ -0.15
SYF2-201ENST00000236273 CHCHD1Q96BP2 118 aaKnown RBP14.15□□□□□ -0.15
SYF2-201ENST00000236273 SEC11AP67812 179 aa14.14□□□□□ -0.15
SYF2-201ENST00000236273 LINC00528Q8N1L1 170 aa14.14□□□□□ -0.15
SYF2-201ENST00000236273 A0A087WYN8 130 aa14.13□□□□□ -0.15
SYF2-201ENST00000236273 TINCRA0A1B0GVN0 87 aa14.13□□□□□ -0.15
SYF2-201ENST00000236273 LINC00310P59036 64 aa14.13□□□□□ -0.15
SYF2-201ENST00000236273 IGLV5-45A0A087WSX0 123 aa14.12□□□□□ -0.15
SYF2-201ENST00000236273 F8WDY8 70 aa14.12□□□□□ -0.15
SYF2-201ENST00000236273 FAM229AH3BQW9 127 aa14.12□□□□□ -0.15
SYF2-201ENST00000236273 RNF151Q2KHN1 245 aa14.12□□□□□ -0.15
SYF2-201ENST00000236273 UNQ6190/PRO20217Q6UXQ8 127 aa14.12□□□□□ -0.15
SYF2-201ENST00000236273 MRPL35Q9NZE8 188 aaKnown RBP14.12□□□□□ -0.15
SYF2-201ENST00000236273 IGKV2-24A0A0C4DH68 120 aa14.11□□□□□ -0.15
SYF2-201ENST00000236273 KRTAP10-4P60372 401 aaPredicted RBP14.11□□□□□ -0.15
SYF2-201ENST00000236273 GEMIN7Q9H840 131 aaKnown RBP14.11□□□□□ -0.15
SYF2-201ENST00000236273 PLAC8Q9NZF1 115 aa14.1□□□□□ -0.15
SYF2-201ENST00000236273 MAJINQ3KP22 176 aa14.09□□□□□ -0.15
SYF2-201ENST00000236273 C2orf82Q6UX34 121 aa14.09□□□□□ -0.15
SYF2-201ENST00000236273 BAGE3Q86Y29 109 aa14.09□□□□□ -0.15
SYF2-201ENST00000236273 C6orf48Q9UBA6 75 aa14.09□□□□□ -0.15
SYF2-201ENST00000236273 NDUFA1O15239 70 aa14.08□□□□□ -0.16
SYF2-201ENST00000236273 ATP5LO75964 103 aa14.08□□□□□ -0.16
SYF2-201ENST00000236273 LOC107984640A0A0U1RRK4 108 aa14.07□□□□□ -0.16
SYF2-201ENST00000236273 NUPR1O60356 82 aa14.07□□□□□ -0.16
SYF2-201ENST00000236273 IGLC3P0DOY3 106 aa14.07□□□□□ -0.16
SYF2-201ENST00000236273 PTTG1IPP53801 180 aa14.07□□□□□ -0.16
SYF2-201ENST00000236273 FAM19A2Q8N3H0 131 aa14.07□□□□□ -0.16
SYF2-201ENST00000236273 LINC00469Q8N7U9 141 aa14.07□□□□□ -0.16
SYF2-201ENST00000236273 DPH3Q96FX2 82 aa14.07□□□□□ -0.16
SYF2-201ENST00000236273 SMIM1B2RUZ4 78 aa14.06□□□□□ -0.16
SYF2-201ENST00000236273 SERF1AO75920 110 aa14.05□□□□□ -0.16
SYF2-201ENST00000236273 NDUFA6P56556 154 aa14.05□□□□□ -0.16
SYF2-201ENST00000236273 Q8IZM0 81 aa14.05□□□□□ -0.16
SYF2-201ENST00000236273 GAGE2BQ13066 116 aa14.04□□□□□ -0.16
SYF2-201ENST00000236273 STPG4Q8N801 248 aa14.04□□□□□ -0.16
SYF2-201ENST00000236273 PKIGQ9Y2B9 76 aa14.04□□□□□ -0.16
SYF2-201ENST00000236273 HSBP1O75506 76 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms