RNA–Protein interactions for RNA: ENST00000222753.5

HOXA13-201, Transcript of homeobox A13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA13, Length 5,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-201ENST00000222753 AMELXQ99217 191 aa13.56□□□□□ -0.24
HOXA13-201ENST00000222753 USP9XQ93008 2570 aaPredicted RBP13.56□□□□□ -0.24
HOXA13-201ENST00000222753 WFDC11Q8NEX6 87 aa13.55□□□□□ -0.24
HOXA13-201ENST00000222753 LINC00694P0DN24 101 aa13.55□□□□□ -0.24
HOXA13-201ENST00000222753 LINC00959A0A1B0GUT2 108 aa13.55□□□□□ -0.24
HOXA13-201ENST00000222753 COX17Q14061 63 aa13.55□□□□□ -0.24
HOXA13-201ENST00000222753 Q6ZQY7 126 aa13.55□□□□□ -0.24
HOXA13-201ENST00000222753 BRI3O95415 125 aa13.54□□□□□ -0.24
HOXA13-201ENST00000222753 SMIM1B2RUZ4 78 aa13.54□□□□□ -0.24
HOXA13-201ENST00000222753 CDIP1Q9H305 208 aa13.54□□□□□ -0.24
HOXA13-201ENST00000222753 USP9YO00507 2555 aaPredicted RBP13.53□□□□□ -0.24
HOXA13-201ENST00000222753 CCKP06307 115 aa13.53□□□□□ -0.24
HOXA13-201ENST00000222753 MPLKIPQ8TAP9 179 aa13.53□□□□□ -0.24
HOXA13-201ENST00000222753 UBE2AP49459 152 aa13.53□□□□□ -0.24
HOXA13-201ENST00000222753 CHKB-CPT1BH3BT56 60 aa13.53□□□□□ -0.24
HOXA13-201ENST00000222753 ANKRD11Q6UB99 2663 aaPredicted RBP13.53□□□□□ -0.24
HOXA13-201ENST00000222753 Q8IZM0 81 aa13.52□□□□□ -0.24
HOXA13-201ENST00000222753 ZNF702PQ9H963 129 aa13.52□□□□□ -0.24
HOXA13-201ENST00000222753 FAM19A3Q7Z5A8 133 aa13.52□□□□□ -0.25
HOXA13-201ENST00000222753 CHCHD7Q9BUK0 85 aa13.51□□□□□ -0.25
HOXA13-201ENST00000222753 XAGE1AQ9HD64 81 aa13.51□□□□□ -0.25
HOXA13-201ENST00000222753 ADAMTSL4-AS1Q5T5F5 129 aa13.51□□□□□ -0.25
HOXA13-201ENST00000222753 Q6ZSV7 163 aa13.5□□□□□ -0.25
HOXA13-201ENST00000222753 C4orf48Q5BLP8 95 aa13.5□□□□□ -0.25
HOXA13-201ENST00000222753 CSDC2Q9Y534 153 aaKnown RBP13.49□□□□□ -0.25
HOXA13-201ENST00000222753 EXPH5Q8NEV8 1989 aa13.48□□□□□ -0.25
HOXA13-201ENST00000222753 V9GYY9 64 aa13.48□□□□□ -0.25
HOXA13-201ENST00000222753 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.48□□□□□ -0.25
HOXA13-201ENST00000222753 ZNF843Q8N446 348 aa13.48□□□□□ -0.25
HOXA13-201ENST00000222753 TRAV7A0A075B6U4 112 aa13.48□□□□□ -0.25
HOXA13-201ENST00000222753 SMIM26A0A096LP01 95 aa13.48□□□□□ -0.25
HOXA13-201ENST00000222753 SNURFQ9Y675 71 aa13.48□□□□□ -0.25
HOXA13-201ENST00000222753 H0Y9J4 135 aa13.46□□□□□ -0.25
HOXA13-201ENST00000222753 MIFP14174 115 aa13.46□□□□□ -0.25
HOXA13-201ENST00000222753 NTM-AS1Q6ZSK4 140 aa13.46□□□□□ -0.25
HOXA13-201ENST00000222753 M0R378 163 aa13.46□□□□□ -0.26
HOXA13-201ENST00000222753 BBC3Q96PG8 261 aaPredicted RBP13.45□□□□□ -0.26
HOXA13-201ENST00000222753 LOC100131303A0A0U1RQF7 123 aa13.45□□□□□ -0.26
HOXA13-201ENST00000222753 PRM2P04554 102 aa13.45□□□□□ -0.26
HOXA13-201ENST00000222753 C5orf42Q9H799 3197 aa13.44□□□□□ -0.26
HOXA13-201ENST00000222753 TRBV7-7A0A0K0K1E9 115 aa13.44□□□□□ -0.26
HOXA13-201ENST00000222753 ZNF580Q9UK33 172 aa13.44□□□□□ -0.26
HOXA13-201ENST00000222753 DOPEY1Q5JWR5 2465 aa13.43□□□□□ -0.26
HOXA13-201ENST00000222753 A0A087WZ39 114 aa13.43□□□□□ -0.26
HOXA13-201ENST00000222753 SYCNQ0VAF6 134 aa13.43□□□□□ -0.26
HOXA13-201ENST00000222753 CDSNQ15517 529 aa13.43□□□□□ -0.26
HOXA13-201ENST00000222753 SERP1Q9Y6X1 66 aa13.43□□□□□ -0.26
HOXA13-201ENST00000222753 B9D2Q9BPU9 175 aa13.42□□□□□ -0.26
HOXA13-201ENST00000222753 KIF25-AS1Q9Y6Z4 181 aa13.42□□□□□ -0.26
HOXA13-201ENST00000222753 PRO0461Q9UI25 63 aa13.42□□□□□ -0.26
HOXA13-201ENST00000222753 C1orf158Q8N1D5 194 aa13.42□□□□□ -0.26
HOXA13-201ENST00000222753 COX6A2Q02221 97 aa13.41□□□□□ -0.26
HOXA13-201ENST00000222753 Q8N814 137 aa13.41□□□□□ -0.26
HOXA13-201ENST00000222753 HIGD2AQ9BW72 106 aa13.41□□□□□ -0.26
HOXA13-201ENST00000222753 A0A0C4DFX4 3053 aa13.41□□□□□ -0.26
HOXA13-201ENST00000222753 ZNF73O43830 326 aaPredicted RBP13.41□□□□□ -0.26
HOXA13-201ENST00000222753 DHRS4-AS1Q9P1J3 65 aa13.41□□□□□ -0.26
HOXA13-201ENST00000222753 AGRNO00468 2067 aa13.41□□□□□ -0.26
HOXA13-201ENST00000222753 LELP1Q5T871 98 aa13.4□□□□□ -0.26
HOXA13-201ENST00000222753 PRRC2AP48634 2157 aaKnown RBP13.4□□□□□ -0.26
HOXA13-201ENST00000222753 ABCA12Q86UK0 2595 aa13.4□□□□□ -0.26
HOXA13-201ENST00000222753 A0A0U1RQV1 116 aa13.4□□□□□ -0.26
HOXA13-201ENST00000222753 C3orf84H3BNL1 204 aa13.4□□□□□ -0.26
HOXA13-201ENST00000222753 CHD8Q9HCK8 2581 aa13.4□□□□□ -0.27
HOXA13-201ENST00000222753 A0A087WVE0 104 aa13.39□□□□□ -0.27
HOXA13-201ENST00000222753 BEAN1Q3B7T3 259 aa13.39□□□□□ -0.27
HOXA13-201ENST00000222753 C14orf177Q52M58 125 aa13.39□□□□□ -0.27
HOXA13-201ENST00000222753 SMCPP49901 116 aaPredicted RBP13.39□□□□□ -0.27
HOXA13-201ENST00000222753 JMJD1CQ15652 2540 aa13.39□□□□□ -0.27
HOXA13-201ENST00000222753 INAFM1C9JVW0 142 aa13.38□□□□□ -0.27
HOXA13-201ENST00000222753 A0A087WYN8 130 aa13.38□□□□□ -0.27
HOXA13-201ENST00000222753 EDN2P20800 178 aa13.38□□□□□ -0.27
HOXA13-201ENST00000222753 C11orf45Q8TAV5 145 aa13.38□□□□□ -0.27
HOXA13-201ENST00000222753 TET2Q6N021 2002 aaPredicted RBP13.38□□□□□ -0.27
HOXA13-201ENST00000222753 ODF3L2Q3SX64 289 aa13.37□□□□□ -0.27
HOXA13-201ENST00000222753 SPTSSBQ8NFR3 76 aa13.37□□□□□ -0.27
HOXA13-201ENST00000222753 C18orf65Q6ZTR6 163 aa13.37□□□□□ -0.27
HOXA13-201ENST00000222753 ADAMTS20P59510 1910 aa13.36□□□□□ -0.27
HOXA13-201ENST00000222753 HRCT1Q6UXD1 115 aa13.36□□□□□ -0.27
HOXA13-201ENST00000222753 MRPL55Q7Z7F7 128 aaKnown RBP13.35□□□□□ -0.27
HOXA13-201ENST00000222753 SHISA2Q6UWI4 295 aa13.35□□□□□ -0.27
HOXA13-201ENST00000222753 FAM19A5Q7Z5A7 132 aaPredicted RBP13.35□□□□□ -0.27
HOXA13-201ENST00000222753 FAM19A1Q7Z5A9 133 aa13.35□□□□□ -0.27
HOXA13-201ENST00000222753 ZFYVE26Q68DK2 2539 aa13.35□□□□□ -0.27
HOXA13-201ENST00000222753 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
HOXA13-201ENST00000222753 KIR2DL5BQ8NHK3 375 aa13.33□□□□□ -0.28
HOXA13-201ENST00000222753 IGKV4-1P06312 121 aa13.33□□□□□ -0.28
HOXA13-201ENST00000222753 SPTBN4Q9H254 2564 aa13.33□□□□□ -0.28
HOXA13-201ENST00000222753 CYSRT1A8MQ03 144 aa13.33□□□□□ -0.28
HOXA13-201ENST00000222753 FN1P02751 2386 aaKnown RBP13.33□□□□□ -0.28
HOXA13-201ENST00000222753 SBSPONQ8IVN8 264 aa13.32□□□□□ -0.28
HOXA13-201ENST00000222753 DEFB131BA0A096LNP1 70 aa13.31□□□□□ -0.28
HOXA13-201ENST00000222753 AVPP01185 164 aa13.31□□□□□ -0.28
HOXA13-201ENST00000222753 LINC00482Q8N8I6 264 aa13.31□□□□□ -0.28
HOXA13-201ENST00000222753 WFDC10AQ9H1F0 79 aa13.31□□□□□ -0.28
HOXA13-201ENST00000222753 SVIPQ8NHG7 77 aa13.31□□□□□ -0.28
HOXA13-201ENST00000222753 LINC01006Q8NI28 216 aa13.31□□□□□ -0.28
HOXA13-201ENST00000222753 LINC00315P59091 139 aa13.31□□□□□ -0.28
HOXA13-201ENST00000222753 PKD1L2Q7Z442 2459 aa13.3□□□□□ -0.28
HOXA13-201ENST00000222753 IGLV4-60A0A075B6I1 120 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms