RNA–Protein interactions for RNA: ENST00000221847.5

EBI3-201, Transcript of Epstein-Barr virus induced 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBI3, Length 1,186 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBI3-201ENST00000221847 SCGB3A1Q96QR1 104 aa10.34□□□□□ -0.75
EBI3-201ENST00000221847 TIMM17AQ99595 171 aa10.34□□□□□ -0.75
EBI3-201ENST00000221847 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.76
EBI3-201ENST00000221847 IGHV3OR16-9A0A0B4J2B5 98 aa10.33□□□□□ -0.76
EBI3-201ENST00000221847 LINC00614P0C842 121 aa10.33□□□□□ -0.76
EBI3-201ENST00000221847 UBE2D1P51668 147 aa10.33□□□□□ -0.76
EBI3-201ENST00000221847 COX6A2Q02221 97 aa10.33□□□□□ -0.76
EBI3-201ENST00000221847 LINC00242Q5T6M2 205 aa10.33□□□□□ -0.76
EBI3-201ENST00000221847 ERASQ7Z444 233 aa10.33□□□□□ -0.76
EBI3-201ENST00000221847 C2orf88Q9BSF0 95 aa10.33□□□□□ -0.76
EBI3-201ENST00000221847 SDIM1Q6ZPB5 146 aa10.32□□□□□ -0.76
EBI3-201ENST00000221847 COLCA2A8K830 154 aa10.31□□□□□ -0.76
EBI3-201ENST00000221847 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
EBI3-201ENST00000221847 PAPPA-AS1Q5QFB9 102 aa10.31□□□□□ -0.76
EBI3-201ENST00000221847 IGHV3-64A0A075B6Q5 118 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 A0A096LNJ9 63 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 SCO1O75880 301 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 APOMO95445 188 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 SMR3BP02814 79 aaPredicted RBP10.3□□□□□ -0.76
EBI3-201ENST00000221847 TRGC2P03986 189 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 RAB5BP61020 215 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 Q8N1X5 172 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 KRTAP4-5Q9BYR2 181 aa10.3□□□□□ -0.76
EBI3-201ENST00000221847 IGLV4-69A0A075B6H9 119 aa10.29□□□□□ -0.76
EBI3-201ENST00000221847 PMCHL1Q16048 86 aa10.29□□□□□ -0.76
EBI3-201ENST00000221847 SCXQ7RTU7 201 aa10.28□□□□□ -0.76
EBI3-201ENST00000221847 CHAC1Q9BUX1 264 aa10.28□□□□□ -0.76
EBI3-201ENST00000221847 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.28□□□□□ -0.76
EBI3-201ENST00000221847 A0A087WZ39 114 aa10.27□□□□□ -0.77
EBI3-201ENST00000221847 PANO1I0J062 215 aa10.27□□□□□ -0.77
EBI3-201ENST00000221847 SPAG11BQ08648 103 aa10.27□□□□□ -0.77
EBI3-201ENST00000221847 SYCNQ0VAF6 134 aa10.27□□□□□ -0.77
EBI3-201ENST00000221847 FAM19A3Q7Z5A8 133 aa10.27□□□□□ -0.77
EBI3-201ENST00000221847 ORAOV1Q8WV07 137 aa10.27□□□□□ -0.77
EBI3-201ENST00000221847 CARD19Q96LW7 228 aa10.27□□□□□ -0.77
EBI3-201ENST00000221847 A0A0J9YXV3 536 aa10.26□□□□□ -0.77
EBI3-201ENST00000221847 HBDP02042 147 aa10.26□□□□□ -0.77
EBI3-201ENST00000221847 OR10D4PQ8NGN7 298 aa10.26□□□□□ -0.77
EBI3-201ENST00000221847 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
EBI3-201ENST00000221847 CST9LQ9H4G1 147 aa10.26□□□□□ -0.77
EBI3-201ENST00000221847 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.25□□□□□ -0.77
EBI3-201ENST00000221847 CHTF8P0CG12 524 aa10.25□□□□□ -0.77
EBI3-201ENST00000221847 Q6ZRU5 148 aa10.25□□□□□ -0.77
EBI3-201ENST00000221847 C2orf48Q96LS8 159 aa10.25□□□□□ -0.77
EBI3-201ENST00000221847 CAMK2N2Q96S95 79 aa10.25□□□□□ -0.77
EBI3-201ENST00000221847 SEC11AP67812 179 aa10.24□□□□□ -0.77
EBI3-201ENST00000221847 PMVKQ15126 192 aa10.24□□□□□ -0.77
EBI3-201ENST00000221847 PDZD11Q5EBL8 140 aa10.24□□□□□ -0.77
EBI3-201ENST00000221847 BAGE3Q86Y29 109 aa10.24□□□□□ -0.77
EBI3-201ENST00000221847 CHCHD1Q96BP2 118 aaKnown RBP10.24□□□□□ -0.77
EBI3-201ENST00000221847 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
EBI3-201ENST00000221847 HERVK_113P63121 156 aa10.23□□□□□ -0.77
EBI3-201ENST00000221847 LINC01561Q8N1V8 128 aa10.23□□□□□ -0.77
EBI3-201ENST00000221847 CDKN2A-AS1Q9UH64 79 aa10.23□□□□□ -0.77
EBI3-201ENST00000221847 FAT1Q14517 4588 aa10.22□□□□□ -0.77
EBI3-201ENST00000221847 EPM2AB3EWF7 344 aa10.22□□□□□ -0.77
EBI3-201ENST00000221847 NDUFA6P56556 154 aa10.22□□□□□ -0.77
EBI3-201ENST00000221847 CIRBPQ14011 172 aaKnown RBP10.22□□□□□ -0.77
EBI3-201ENST00000221847 KIAA0087Q14695 138 aa10.22□□□□□ -0.77
EBI3-201ENST00000221847 DPH3Q96FX2 82 aa10.22□□□□□ -0.77
EBI3-201ENST00000221847 IGKV2-24A0A0C4DH68 120 aa10.21□□□□□ -0.77
EBI3-201ENST00000221847 TINCRA0A1B0GVN0 87 aa10.21□□□□□ -0.77
EBI3-201ENST00000221847 ATP5LO75964 103 aa10.21□□□□□ -0.77
EBI3-201ENST00000221847 Q5VSD8 79 aa10.21□□□□□ -0.77
EBI3-201ENST00000221847 C10orf25Q5T742 122 aa10.2□□□□□ -0.78
EBI3-201ENST00000221847 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
EBI3-201ENST00000221847 LINC00469Q8N7U9 141 aa10.2□□□□□ -0.78
EBI3-201ENST00000221847 SPACA4Q8TDM5 124 aa10.2□□□□□ -0.78
EBI3-201ENST00000221847 A0A096LNI7 61 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 F8WDY8 70 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 NDUFA1O15239 70 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 HSBP1O75506 76 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 LINC00310P59036 64 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 LINC00528Q8N1L1 170 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 FAM19A2Q8N3H0 131 aa10.19□□□□□ -0.78
EBI3-201ENST00000221847 A0A087WYN8 130 aa10.18□□□□□ -0.78
EBI3-201ENST00000221847 LOC107984640A0A0U1RRK4 108 aa10.18□□□□□ -0.78
EBI3-201ENST00000221847 SERF1AO75920 110 aa10.18□□□□□ -0.78
EBI3-201ENST00000221847 RNF151Q2KHN1 245 aa10.18□□□□□ -0.78
EBI3-201ENST00000221847 MAJINQ3KP22 176 aa10.18□□□□□ -0.78
EBI3-201ENST00000221847 PACRGQ96M98 296 aaPredicted RBP10.18□□□□□ -0.78
EBI3-201ENST00000221847 MRPL35Q9NZE8 188 aaKnown RBP10.18□□□□□ -0.78
EBI3-201ENST00000221847 TOMM7Q9P0U1 55 aa10.18□□□□□ -0.78
EBI3-201ENST00000221847 VPS13BQ7Z7G8 4022 aa10.18□□□□□ -0.78
EBI3-201ENST00000221847 IGLV5-45A0A087WSX0 123 aa10.17□□□□□ -0.78
EBI3-201ENST00000221847 C2orf82Q6UX34 121 aa10.17□□□□□ -0.78
EBI3-201ENST00000221847 PKIGQ9Y2B9 76 aa10.17□□□□□ -0.78
EBI3-201ENST00000221847 NUPR1O60356 82 aa10.16□□□□□ -0.78
EBI3-201ENST00000221847 PRSS2P07478 247 aa10.16□□□□□ -0.78
EBI3-201ENST00000221847 IGLC3P0DOY3 106 aa10.16□□□□□ -0.78
EBI3-201ENST00000221847 GAGE2BQ13066 116 aa10.16□□□□□ -0.78
EBI3-201ENST00000221847 IFI27L1Q96BM0 104 aa10.16□□□□□ -0.78
EBI3-201ENST00000221847 C6orf48Q9UBA6 75 aa10.16□□□□□ -0.78
EBI3-201ENST00000221847 SMIM1B2RUZ4 78 aa10.15□□□□□ -0.78
EBI3-201ENST00000221847 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.78
EBI3-201ENST00000221847 SRRM2Q9UQ35 2752 aaKnown RBP10.15□□□□□ -0.78
EBI3-201ENST00000221847 ABCA13Q86UQ4 5058 aa10.14□□□□□ -0.79
EBI3-201ENST00000221847 SPINK8P0C7L1 97 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms