RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 TEX48A0A1B0GUV7 120 aa10.61□□□□□ -0.71
PAF1-201ENST00000221265 STAB2Q8WWQ8 2551 aa10.6□□□□□ -0.71
PAF1-201ENST00000221265 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
PAF1-201ENST00000221265 SFTA2Q6UW10 78 aa10.6□□□□□ -0.71
PAF1-201ENST00000221265 EIF4EBP3O60516 100 aaPredicted RBP10.59□□□□□ -0.71
PAF1-201ENST00000221265 MUSTN1Q8IVN3 82 aa10.59□□□□□ -0.71
PAF1-201ENST00000221265 MTURNQ8N3F0 131 aa10.59□□□□□ -0.71
PAF1-201ENST00000221265 A4D1N5 150 aa10.59□□□□□ -0.71
PAF1-201ENST00000221265 NTM-AS1Q6ZSK4 140 aa10.59□□□□□ -0.71
PAF1-201ENST00000221265 LOC107984156A0A0G2JMH3 177 aa10.58□□□□□ -0.72
PAF1-201ENST00000221265 SPINK8P0C7L1 97 aa10.58□□□□□ -0.72
PAF1-201ENST00000221265 HTN3P15516 51 aa10.58□□□□□ -0.72
PAF1-201ENST00000221265 C21orf62-AS1Q17RA5 79 aa10.58□□□□□ -0.72
PAF1-201ENST00000221265 ARL17AQ8IVW1 177 aa10.58□□□□□ -0.72
PAF1-201ENST00000221265 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
PAF1-201ENST00000221265 MEGF8Q7Z7M0 2845 aa10.58□□□□□ -0.72
PAF1-201ENST00000221265 A0A0J9YWU9 116 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 TMEM238C9JI98 176 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 LITAFQ99732 161 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 PRO1854Q9UHT4 67 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 PRO0255Q9UI72 69 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 ATP5G1P05496 136 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 LINC00694P0DN24 101 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 GYPEP15421 78 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 SH2D6Q7Z4S9 175 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
PAF1-201ENST00000221265 TM2D3Q9BRN9 247 aa10.57□□□□□ -0.72
PAF1-201ENST00000221265 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
PAF1-201ENST00000221265 PSMB2P49721 201 aa10.56□□□□□ -0.72
PAF1-201ENST00000221265 GEMIN7Q9H840 131 aaKnown RBP10.56□□□□□ -0.72
PAF1-201ENST00000221265 NDUFA12Q9UI09 145 aa10.56□□□□□ -0.72
PAF1-201ENST00000221265 PRKDCP78527 4128 aaKnown RBP10.56□□□□□ -0.72
PAF1-201ENST00000221265 F5H768 121 aa10.56□□□□□ -0.72
PAF1-201ENST00000221265 TIRAPP58753 221 aa10.56□□□□□ -0.72
PAF1-201ENST00000221265 ETDBQ3ZM63 59 aa10.56□□□□□ -0.72
PAF1-201ENST00000221265 DGAT2L7PQ6IED9 249 aa10.56□□□□□ -0.72
PAF1-201ENST00000221265 C11orf68Q9H3H3 251 aaKnown RBP10.56□□□□□ -0.72
PAF1-201ENST00000221265 CDKN2A-AS1Q9UH64 79 aa10.56□□□□□ -0.72
PAF1-201ENST00000221265 PAX4O43316 350 aa10.55□□□□□ -0.72
PAF1-201ENST00000221265 SPATA25Q9BR10 227 aa10.55□□□□□ -0.72
PAF1-201ENST00000221265 IGLV5-45A0A087WSX0 123 aa10.54□□□□□ -0.72
PAF1-201ENST00000221265 TRAV26-1A0A087WT03 109 aa10.54□□□□□ -0.72
PAF1-201ENST00000221265 A0A096LPF7 62 aa10.54□□□□□ -0.72
PAF1-201ENST00000221265 COX6A2Q02221 97 aa10.54□□□□□ -0.72
PAF1-201ENST00000221265 ADAMTSL4-AS1Q5T5F5 129 aa10.54□□□□□ -0.72
PAF1-201ENST00000221265 A0A0B4J2C4 111 aa10.54□□□□□ -0.72
PAF1-201ENST00000221265 IGHV3-33P01772 117 aa10.54□□□□□ -0.72
PAF1-201ENST00000221265 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
PAF1-201ENST00000221265 TCL1BO95988 128 aa10.53□□□□□ -0.72
PAF1-201ENST00000221265 LYRM7Q5U5X0 104 aa10.53□□□□□ -0.72
PAF1-201ENST00000221265 Q6ZTC4 211 aa10.53□□□□□ -0.72
PAF1-201ENST00000221265 ZFAND6Q6FIF0 208 aa10.53□□□□□ -0.72
PAF1-201ENST00000221265 NANOS2P60321 138 aaKnown RBP10.52□□□□□ -0.73
PAF1-201ENST00000221265 LINC00242Q5T6M2 205 aa10.52□□□□□ -0.73
PAF1-201ENST00000221265 TMEM101Q96IK0 257 aa10.52□□□□□ -0.73
PAF1-201ENST00000221265 SPANXDQ9BXN6 97 aa10.52□□□□□ -0.73
PAF1-201ENST00000221265 SPANXCQ9NY87 97 aa10.52□□□□□ -0.73
PAF1-201ENST00000221265 CSDC2Q9Y534 153 aaKnown RBP10.52□□□□□ -0.73
PAF1-201ENST00000221265 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.51□□□□□ -0.73
PAF1-201ENST00000221265 FAM19A3Q7Z5A8 133 aa10.51□□□□□ -0.73
PAF1-201ENST00000221265 ATP6V0E2Q8NHE4 81 aa10.51□□□□□ -0.73
PAF1-201ENST00000221265 ERG28Q9UKR5 140 aa10.51□□□□□ -0.73
PAF1-201ENST00000221265 TRBV20-1A0A075B6N2 111 aa10.5□□□□□ -0.73
PAF1-201ENST00000221265 PRSS2P07478 247 aa10.5□□□□□ -0.73
PAF1-201ENST00000221265 SCGB1C2P0DMR2 95 aa10.5□□□□□ -0.73
PAF1-201ENST00000221265 HERVK_113P63121 156 aa10.5□□□□□ -0.73
PAF1-201ENST00000221265 GTSF1LQ9H1H1 148 aa10.5□□□□□ -0.73
PAF1-201ENST00000221265 MIAQ16674 131 aa10.49□□□□□ -0.73
PAF1-201ENST00000221265 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
PAF1-201ENST00000221265 TRBV6-8A0A0A6YYG3 113 aa10.49□□□□□ -0.73
PAF1-201ENST00000221265 IGLV5-39A0A0G2JS06 123 aa10.49□□□□□ -0.73
PAF1-201ENST00000221265 H7C2G1 150 aa10.49□□□□□ -0.73
PAF1-201ENST00000221265 C11orf45Q8TAV5 145 aa10.49□□□□□ -0.73
PAF1-201ENST00000221265 TRAV13-1A0A0B4J241 112 aa10.48□□□□□ -0.73
PAF1-201ENST00000221265 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
PAF1-201ENST00000221265 NDUFA1O15239 70 aa10.48□□□□□ -0.73
PAF1-201ENST00000221265 J3QR89 54 aa10.47□□□□□ -0.73
PAF1-201ENST00000221265 TIMM17BO60830 172 aa10.47□□□□□ -0.73
PAF1-201ENST00000221265 KRTAP21-3Q3LHN1 58 aa10.47□□□□□ -0.73
PAF1-201ENST00000221265 NPC2P61916 151 aa10.46□□□□□ -0.73
PAF1-201ENST00000221265 GAGE6Q13070 117 aa10.46□□□□□ -0.73
PAF1-201ENST00000221265 SMIM1B2RUZ4 78 aa10.46□□□□□ -0.74
PAF1-201ENST00000221265 SMAGPQ0VAQ4 97 aa10.45□□□□□ -0.74
PAF1-201ENST00000221265 UBE2L6O14933 153 aa10.45□□□□□ -0.74
PAF1-201ENST00000221265 FOXI1Q12951 378 aa10.45□□□□□ -0.74
PAF1-201ENST00000221265 Q1RN00 199 aa10.45□□□□□ -0.74
PAF1-201ENST00000221265 CHCHD5Q9BSY4 110 aa10.45□□□□□ -0.74
PAF1-201ENST00000221265 Q9H8V8 135 aa10.45□□□□□ -0.74
PAF1-201ENST00000221265 DAND5Q8N907 189 aa10.44□□□□□ -0.74
PAF1-201ENST00000221265 B9D2Q9BPU9 175 aa10.44□□□□□ -0.74
PAF1-201ENST00000221265 DEFB131BA0A096LNP1 70 aa10.43□□□□□ -0.74
PAF1-201ENST00000221265 IFITM1P13164 125 aa10.43□□□□□ -0.74
PAF1-201ENST00000221265 MRPL23Q16540 153 aaKnown RBP10.43□□□□□ -0.74
PAF1-201ENST00000221265 ICOSQ9Y6W8 199 aa10.43□□□□□ -0.74
PAF1-201ENST00000221265 TRBV30A0A0K0K1B3 111 aa10.43□□□□□ -0.74
PAF1-201ENST00000221265 GAGE12HA6NDE8 117 aa10.42□□□□□ -0.74
PAF1-201ENST00000221265 H7C423 109 aa10.42□□□□□ -0.74
PAF1-201ENST00000221265 TRIAP1O43715 76 aa10.42□□□□□ -0.74
PAF1-201ENST00000221265 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
PAF1-201ENST00000221265 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms