RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 IGIPA6NJ69 53 aa12.96□□□□□ -0.34
EXTL3-201ENST00000220562 CRIP2P52943 208 aaPredicted RBP12.96□□□□□ -0.34
EXTL3-201ENST00000220562 ATP5EP56381 51 aaPredicted RBP12.96□□□□□ -0.34
EXTL3-201ENST00000220562 IGHV4-30-4P0DP06 118 aa12.95□□□□□ -0.34
EXTL3-201ENST00000220562 PRR4Q16378 134 aa12.95□□□□□ -0.34
EXTL3-201ENST00000220562 NDUFC1O43677 76 aa12.95□□□□□ -0.34
EXTL3-201ENST00000220562 IMUPQ9GZP8 106 aa12.95□□□□□ -0.34
EXTL3-201ENST00000220562 ATG2AQ2TAZ0 1938 aa12.95□□□□□ -0.34
EXTL3-201ENST00000220562 PLCE1Q9P212 2302 aa12.95□□□□□ -0.34
EXTL3-201ENST00000220562 OXLD1Q5BKU9 147 aa12.94□□□□□ -0.34
EXTL3-201ENST00000220562 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.94□□□□□ -0.34
EXTL3-201ENST00000220562 CNFNQ9BYD5 112 aa12.94□□□□□ -0.34
EXTL3-201ENST00000220562 DSCAMO60469 2012 aa12.94□□□□□ -0.34
EXTL3-201ENST00000220562 CCDC179H3BU77 68 aa12.94□□□□□ -0.34
EXTL3-201ENST00000220562 SMR3AQ99954 134 aa12.93□□□□□ -0.34
EXTL3-201ENST00000220562 V9GYY9 64 aa12.93□□□□□ -0.34
EXTL3-201ENST00000220562 COX6A2Q02221 97 aa12.93□□□□□ -0.34
EXTL3-201ENST00000220562 ZFHX2Q9C0A1 2572 aaPredicted RBP12.92□□□□□ -0.34
EXTL3-201ENST00000220562 LINC00242Q5T6M2 205 aa12.92□□□□□ -0.34
EXTL3-201ENST00000220562 RETNQ9HD89 108 aa12.92□□□□□ -0.34
EXTL3-201ENST00000220562 LINC00474Q9P2X8 69 aa12.91□□□□□ -0.34
EXTL3-201ENST00000220562 C9orf116Q5BN46 136 aaPredicted RBP12.91□□□□□ -0.34
EXTL3-201ENST00000220562 XGP55808 180 aa12.91□□□□□ -0.34
EXTL3-201ENST00000220562 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
EXTL3-201ENST00000220562 C10orf25Q5T742 122 aa12.91□□□□□ -0.34
EXTL3-201ENST00000220562 CHCHD7Q9BUK0 85 aa12.91□□□□□ -0.34
EXTL3-201ENST00000220562 UNQ6190/PRO20217Q6UXQ8 127 aa12.9□□□□□ -0.34
EXTL3-201ENST00000220562 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
EXTL3-201ENST00000220562 PLA2G2AP14555 144 aa12.9□□□□□ -0.34
EXTL3-201ENST00000220562 COX7CP15954 63 aa12.89□□□□□ -0.35
EXTL3-201ENST00000220562 URB1-AS1Q96HZ7 61 aa12.89□□□□□ -0.35
EXTL3-201ENST00000220562 Q6JHZ5 121 aa12.89□□□□□ -0.35
EXTL3-201ENST00000220562 M0QXV9 152 aa12.89□□□□□ -0.35
EXTL3-201ENST00000220562 Q8N9L7 120 aa12.88□□□□□ -0.35
EXTL3-201ENST00000220562 SMIM1B2RUZ4 78 aa12.87□□□□□ -0.35
EXTL3-201ENST00000220562 TNCP24821 2201 aa12.87□□□□□ -0.35
EXTL3-201ENST00000220562 MUC7Q8TAX7 377 aa12.87□□□□□ -0.35
EXTL3-201ENST00000220562 A6NED7 52 aa12.86□□□□□ -0.35
EXTL3-201ENST00000220562 LINC00310P59036 64 aa12.86□□□□□ -0.35
EXTL3-201ENST00000220562 Q8N814 137 aa12.86□□□□□ -0.35
EXTL3-201ENST00000220562 HCFC1P51610 2035 aa12.86□□□□□ -0.35
EXTL3-201ENST00000220562 A0A087WYN8 130 aa12.86□□□□□ -0.35
EXTL3-201ENST00000220562 SERP1Q9Y6X1 66 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 IGLV4-60A0A075B6I1 120 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 LINC00694P0DN24 101 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 PRR3P79522 188 aaKnown RBP12.85□□□□□ -0.35
EXTL3-201ENST00000220562 CELA1Q9UNI1 258 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 TSPEAR-AS2P59090 65 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 KRTAP10-9P60411 292 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 NTM-AS1Q6ZSK4 140 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 TRBV10-3A0A0K0K1G6 114 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 REG3GQ6UW15 175 aa12.85□□□□□ -0.35
EXTL3-201ENST00000220562 LRP4O75096 1905 aa12.83□□□□□ -0.36
EXTL3-201ENST00000220562 C6orf223Q8N319 242 aa12.83□□□□□ -0.36
EXTL3-201ENST00000220562 FHL2Q14192 279 aa12.82□□□□□ -0.36
EXTL3-201ENST00000220562 BRI3O95415 125 aa12.82□□□□□ -0.36
EXTL3-201ENST00000220562 EGFEM1PQ0D2K5 195 aa12.82□□□□□ -0.36
EXTL3-201ENST00000220562 ESRGQ1W209 222 aa12.82□□□□□ -0.36
EXTL3-201ENST00000220562 IGLV1-51P01701 117 aa12.81□□□□□ -0.36
EXTL3-201ENST00000220562 CREBBPQ92793 2442 aa12.81□□□□□ -0.36
EXTL3-201ENST00000220562 RPL28P46779 137 aaKnown RBP12.8□□□□□ -0.36
EXTL3-201ENST00000220562 C1orf137Q5JT78 98 aa12.8□□□□□ -0.36
EXTL3-201ENST00000220562 CIRBP-AS1Q8TBR5 109 aa12.8□□□□□ -0.36
EXTL3-201ENST00000220562 ADAMTSL4-AS1Q5T5F5 129 aa12.79□□□□□ -0.36
EXTL3-201ENST00000220562 RAI1Q7Z5J4 1906 aaPredicted RBP12.79□□□□□ -0.36
EXTL3-201ENST00000220562 NUPR2A6NF83 97 aa12.79□□□□□ -0.36
EXTL3-201ENST00000220562 ZNF580Q9UK33 172 aa12.79□□□□□ -0.36
EXTL3-201ENST00000220562 PTPRSQ13332 1948 aa12.79□□□□□ -0.36
EXTL3-201ENST00000220562 Q6ZSN1 163 aa12.78□□□□□ -0.36
EXTL3-201ENST00000220562 HIVEP2P31629 2446 aa12.77□□□□□ -0.36
EXTL3-201ENST00000220562 Q6ZTC4 211 aa12.77□□□□□ -0.36
EXTL3-201ENST00000220562 AMELXQ99217 191 aa12.76□□□□□ -0.37
EXTL3-201ENST00000220562 Q6ZVQ6 151 aa12.75□□□□□ -0.37
EXTL3-201ENST00000220562 A0A087WVE0 104 aa12.75□□□□□ -0.37
EXTL3-201ENST00000220562 IGLV5-52A0A0A0MRZ9 124 aa12.75□□□□□ -0.37
EXTL3-201ENST00000220562 CPAMD8Q8IZJ3 1885 aa12.75□□□□□ -0.37
EXTL3-201ENST00000220562 FAM208BQ5VWN6 2430 aa12.75□□□□□ -0.37
EXTL3-201ENST00000220562 MUC6Q6W4X9 2439 aa12.74□□□□□ -0.37
EXTL3-201ENST00000220562 TRAV7A0A075B6U4 112 aa12.74□□□□□ -0.37
EXTL3-201ENST00000220562 C10orf142B7Z368 130 aa12.74□□□□□ -0.37
EXTL3-201ENST00000220562 C16orf95Q9H693 158 aa12.74□□□□□ -0.37
EXTL3-201ENST00000220562 IGHV6-1A0A0B4J1U7 121 aa12.74□□□□□ -0.37
EXTL3-201ENST00000220562 RETNLBQ9BQ08 111 aa12.74□□□□□ -0.37
EXTL3-201ENST00000220562 Q6Q795 121 aa12.74□□□□□ -0.37
EXTL3-201ENST00000220562 EML5Q05BV3 1969 aa12.72□□□□□ -0.37
EXTL3-201ENST00000220562 LINC00208Q96KT6 92 aa12.72□□□□□ -0.37
EXTL3-201ENST00000220562 CSDC2Q9Y534 153 aaKnown RBP12.71□□□□□ -0.37
EXTL3-201ENST00000220562 Q9BRP9 147 aa12.71□□□□□ -0.38
EXTL3-201ENST00000220562 PTPRQQ9UMZ3 2332 aa12.7□□□□□ -0.38
EXTL3-201ENST00000220562 PRR14LQ5THK1 2151 aa12.7□□□□□ -0.38
EXTL3-201ENST00000220562 A0A1W2PPR1 153 aa12.7□□□□□ -0.38
EXTL3-201ENST00000220562 COX8CQ7Z4L0 72 aa12.7□□□□□ -0.38
EXTL3-201ENST00000220562 LINC01556Q5JQF7 62 aa12.69□□□□□ -0.38
EXTL3-201ENST00000220562 BEAN1Q3B7T3 259 aa12.69□□□□□ -0.38
EXTL3-201ENST00000220562 A0A096LNJ9 63 aa12.68□□□□□ -0.38
EXTL3-201ENST00000220562 PRYO14603 147 aa12.67□□□□□ -0.38
EXTL3-201ENST00000220562 LINC01547P58512 204 aaPredicted RBP12.67□□□□□ -0.38
EXTL3-201ENST00000220562 LINC00575Q6W349 94 aa12.67□□□□□ -0.38
EXTL3-201ENST00000220562 LYPD5Q6UWN5 251 aa12.67□□□□□ -0.38
EXTL3-201ENST00000220562 SOSTDC1Q6X4U4 206 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms