RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 C1orf158Q8N1D5 194 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 TTTY13Q9BZ97 58 aa3.27□□□□□ -1.89
CHD9-201ENST00000219084 K7ERS5 55 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 ENHOQ6UWT2 76 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 LINC00269Q8N2A0 174 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 USP17L23D6RBM5 183 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 LELP1Q5T871 98 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 SETD2Q9BYW2 2564 aaPredicted RBP3.26□□□□□ -1.89
CHD9-201ENST00000219084 SMIM26A0A096LP01 95 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 A0A096LPF7 62 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 Q9HAA7 133 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 KLK12Q9UKR0 248 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 TRBV10-3A0A0K0K1G6 114 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 LRRK2Q5S007 2527 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 ZFHX2Q9C0A1 2572 aaPredicted RBP3.26□□□□□ -1.89
CHD9-201ENST00000219084 AMELXQ99217 191 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 JMJD1CQ15652 2540 aa3.26□□□□□ -1.89
CHD9-201ENST00000219084 C1orf229Q6ZS94 237 aaPredicted RBP3.26□□□□□ -1.89
CHD9-201ENST00000219084 HILS1P60008 231 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 SPTSSBQ8NFR3 76 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 LINC00310P59036 64 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 CXCL6P80162 114 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 C20orf197Q8N268 126 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 H0Y9J4 135 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 IGHV4-31P0DP07 118 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 DEFB135Q30KP9 77 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 Q6ZTI0 123 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 A0A087WZ39 114 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 TRBV7-7A0A0K0K1E9 115 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 C11orf45Q8TAV5 145 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 IGLV4-69A0A075B6H9 119 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 LOC107984640A0A0U1RRK4 108 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 CRYGDP07320 174 aa3.25□□□□□ -1.89
CHD9-201ENST00000219084 A0A1B0GUV1 79 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 MAPK1IP1LQ8NDC0 245 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 C19orf84I3L1E1 186 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 XGP55808 180 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 CDC42SE2Q9NRR3 84 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 ZFYVE26Q68DK2 2539 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 IGHV4-28A0A0C4DH34 117 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 ZNF73O43830 326 aaPredicted RBP3.24□□□□□ -1.89
CHD9-201ENST00000219084 Q8N814 137 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 SMIM11BQ8TCY0 68 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 IGKV4-1P06312 121 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 BEAN1Q3B7T3 259 aa3.24□□□□□ -1.89
CHD9-201ENST00000219084 TRBV7-6A0A0J9YX20 115 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 IGLV2-18A0A075B6J9 118 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 SYCNQ0VAF6 134 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 CEMP1Q6PRD7 247 aaPredicted RBP3.23□□□□□ -1.89
CHD9-201ENST00000219084 POM121L12Q8N7R1 296 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 LINC00959A0A1B0GUT2 108 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 EGFEM1PQ0D2K5 195 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 ZNF702PQ9H963 129 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 F8P00451 2351 aa3.23□□□□□ -1.89
CHD9-201ENST00000219084 TRAV10A0A0B4J240 114 aa3.22□□□□□ -1.89
CHD9-201ENST00000219084 C6orf99Q4VX62 202 aa3.22□□□□□ -1.89
CHD9-201ENST00000219084 PRYO14603 147 aa3.22□□□□□ -1.89
CHD9-201ENST00000219084 CASC2Q6XLA1 102 aa3.22□□□□□ -1.89
CHD9-201ENST00000219084 NTM-AS1Q6ZSK4 140 aa3.22□□□□□ -1.89
CHD9-201ENST00000219084 CCDC179H3BU77 68 aa3.22□□□□□ -1.89
CHD9-201ENST00000219084 CENPEQ02224 2701 aa3.22□□□□□ -1.89
CHD9-201ENST00000219084 URB1-AS1Q96HZ7 61 aa3.21□□□□□ -1.89
CHD9-201ENST00000219084 C2orf48Q96LS8 159 aa3.21□□□□□ -1.89
CHD9-201ENST00000219084 SMIM1B2RUZ4 78 aa3.21□□□□□ -1.9
CHD9-201ENST00000219084 PRR9Q5T870 116 aa3.21□□□□□ -1.9
CHD9-201ENST00000219084 C10orf25Q5T742 122 aa3.21□□□□□ -1.9
CHD9-201ENST00000219084 C11orf21Q9P2W6 132 aa3.21□□□□□ -1.9
CHD9-201ENST00000219084 SHISA2Q6UWI4 295 aa3.21□□□□□ -1.9
CHD9-201ENST00000219084 LINC00242Q5T6M2 205 aa3.21□□□□□ -1.9
CHD9-201ENST00000219084 C7orf33Q8WU49 177 aa3.21□□□□□ -1.9
CHD9-201ENST00000219084 RPL37AP8A6NKH3 93 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 Q6ZS46 218 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 DEFB131BA0A096LNP1 70 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 PRO3102Q9H379 93 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 Q6ZQY7 126 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 CHD8Q9HCK8 2581 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 C16orf95Q9H693 158 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 LINC00694P0DN24 101 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 FAM19A1Q7Z5A9 133 aa3.2□□□□□ -1.9
CHD9-201ENST00000219084 C1orf195Q5TG92 126 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 GCN1Q92616 2671 aaKnown RBP3.19□□□□□ -1.9
CHD9-201ENST00000219084 ZNF292O60281 2723 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 A6NED7 52 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 CRYGAP11844 174 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 DEFB1P60022 68 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 Q6ZSV7 163 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 DOPEY1Q5JWR5 2465 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 IGLV5-45A0A087WSX0 123 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 hDV103S1A0JD37 113 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 Q8N9L7 120 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 MPLKIPQ8TAP9 179 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 A0A096LNJ9 63 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 IGLV5-39A0A0G2JS06 123 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 ANKRD11Q6UB99 2663 aaPredicted RBP3.19□□□□□ -1.9
CHD9-201ENST00000219084 NOTCH2NLQ7Z3S9 236 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 NRGNQ92686 78 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 FAM19A4Q96LR4 140 aa3.19□□□□□ -1.9
CHD9-201ENST00000219084 H3BPC8 53 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 WISP2O76076 250 aa3.18□□□□□ -1.9
CHD9-201ENST00000219084 LIMD2Q9BT23 127 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms