RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 C2orf82Q6UX34 121 aa17.16■□□□□ 0.34
SNTA1-201ENST00000217381 C16orf74Q96GX8 76 aa17.15■□□□□ 0.34
SNTA1-201ENST00000217381 ACANP16112 2415 aa17.15■□□□□ 0.34
SNTA1-201ENST00000217381 H3BT86 120 aa17.15■□□□□ 0.34
SNTA1-201ENST00000217381 CMC4P56277 68 aaPredicted RBP17.15■□□□□ 0.34
SNTA1-201ENST00000217381 C16orf95Q9H693 158 aa17.15■□□□□ 0.34
SNTA1-201ENST00000217381 UBE2WQ96B02 151 aa17.14■□□□□ 0.33
SNTA1-201ENST00000217381 A0A0U1RRA0 63 aa17.14■□□□□ 0.33
SNTA1-201ENST00000217381 RNASE1P07998 156 aaKnown RBP17.14■□□□□ 0.33
SNTA1-201ENST00000217381 C19orf73Q9NVV2 129 aa17.14■□□□□ 0.33
SNTA1-201ENST00000217381 SOSTDC1Q6X4U4 206 aa17.13■□□□□ 0.33
SNTA1-201ENST00000217381 TMEM243Q9BU79 118 aa17.13■□□□□ 0.33
SNTA1-201ENST00000217381 GAGE7O76087 117 aa17.13■□□□□ 0.33
SNTA1-201ENST00000217381 GAGE12FP0CL80 117 aa17.13■□□□□ 0.33
SNTA1-201ENST00000217381 GAGE12GP0CL81 117 aa17.13■□□□□ 0.33
SNTA1-201ENST00000217381 GAGE12IP0CL82 117 aa17.13■□□□□ 0.33
SNTA1-201ENST00000217381 PRIMA1Q86XR5 153 aa17.13■□□□□ 0.33
SNTA1-201ENST00000217381 TRGV2A0A075B6R0 118 aa17.12■□□□□ 0.33
SNTA1-201ENST00000217381 UBE2L6O14933 153 aa17.12■□□□□ 0.33
SNTA1-201ENST00000217381 RPL35AP18077 110 aaKnown RBP17.12■□□□□ 0.33
SNTA1-201ENST00000217381 FAM110AQ9BQ89 295 aa17.12■□□□□ 0.33
SNTA1-201ENST00000217381 LOC100131303A0A0U1RQF7 123 aa17.11■□□□□ 0.33
SNTA1-201ENST00000217381 IGLV1-51P01701 117 aa17.11■□□□□ 0.33
SNTA1-201ENST00000217381 CSNK1G2-AS1Q8NCQ2 148 aa17.1■□□□□ 0.33
SNTA1-201ENST00000217381 COPS9Q8WXC6 57 aa17.1■□□□□ 0.33
SNTA1-201ENST00000217381 TRBV6-4A0A1B0GX49 114 aa17.09■□□□□ 0.33
SNTA1-201ENST00000217381 MEIG1Q5JSS6 88 aa17.09■□□□□ 0.33
SNTA1-201ENST00000217381 OVOL2Q9BRP0 275 aa17.09■□□□□ 0.33
SNTA1-201ENST00000217381 HERV-K104P63124 156 aa17.08■□□□□ 0.33
SNTA1-201ENST00000217381 CITED1Q99966 193 aa17.08■□□□□ 0.33
SNTA1-201ENST00000217381 SETD2Q9BYW2 2564 aaPredicted RBP17.08■□□□□ 0.32
SNTA1-201ENST00000217381 NOTCH3Q9UM47 2321 aa17.07■□□□□ 0.32
SNTA1-201ENST00000217381 TRAV8-4A0A0B4J246 113 aa17.07■□□□□ 0.32
SNTA1-201ENST00000217381 JMJD1CQ15652 2540 aa17.06■□□□□ 0.32
SNTA1-201ENST00000217381 SHISA2Q6UWI4 295 aa17.05■□□□□ 0.32
SNTA1-201ENST00000217381 TRGV4A0A0C4DH28 118 aa17.04■□□□□ 0.32
SNTA1-201ENST00000217381 COX7A2LO14548 114 aa17.03■□□□□ 0.32
SNTA1-201ENST00000217381 PPDPFQ9H3Y8 114 aa17.03■□□□□ 0.32
SNTA1-201ENST00000217381 C2CD3Q4AC94 2353 aa17.02■□□□□ 0.32
SNTA1-201ENST00000217381 FLNBO75369 2602 aaKnown RBP17.02■□□□□ 0.32
SNTA1-201ENST00000217381 GAGE6Q13070 117 aa17.01■□□□□ 0.31
SNTA1-201ENST00000217381 FHL2Q14192 279 aa17.01■□□□□ 0.31
SNTA1-201ENST00000217381 DEFB121Q5J5C9 76 aa17.01■□□□□ 0.31
SNTA1-201ENST00000217381 CRLF1O75462 422 aa17.01■□□□□ 0.31
SNTA1-201ENST00000217381 MTORP42345 2549 aa17■□□□□ 0.31
SNTA1-201ENST00000217381 SNCGO76070 127 aa17■□□□□ 0.31
SNTA1-201ENST00000217381 IGLV4-60A0A075B6I1 120 aa16.98■□□□□ 0.31
SNTA1-201ENST00000217381 TRBV6-8A0A0A6YYG3 113 aa16.98■□□□□ 0.31
SNTA1-201ENST00000217381 HILS1P60008 231 aa16.98■□□□□ 0.31
SNTA1-201ENST00000217381 COX7B2Q8TF08 81 aa16.98■□□□□ 0.31
SNTA1-201ENST00000217381 OTOGQ6ZRI0 2925 aa16.97■□□□□ 0.31
SNTA1-201ENST00000217381 IGKV3OR2-268A0A0C4DH90 116 aa16.96■□□□□ 0.3
SNTA1-201ENST00000217381 FAM240AA0A1B0GVK7 77 aa16.95■□□□□ 0.3
SNTA1-201ENST00000217381 C15orf53Q8NAA6 179 aa16.95■□□□□ 0.3
SNTA1-201ENST00000217381 GAGE2BQ13066 116 aa16.94■□□□□ 0.3
SNTA1-201ENST00000217381 GAGE2EQ4V326 116 aa16.94■□□□□ 0.3
SNTA1-201ENST00000217381 GAGE2DQ9UEU5 116 aa16.94■□□□□ 0.3
SNTA1-201ENST00000217381 IGHV3OR16-9A0A0B4J2B5 98 aa16.93■□□□□ 0.3
SNTA1-201ENST00000217381 CHCHD5Q9BSY4 110 aa16.93■□□□□ 0.3
SNTA1-201ENST00000217381 TOMM7Q9P0U1 55 aa16.93■□□□□ 0.3
SNTA1-201ENST00000217381 KRTAP10-3P60369 221 aa16.93■□□□□ 0.3
SNTA1-201ENST00000217381 MIR7-3HGQ8N6C7 128 aa16.93■□□□□ 0.3
SNTA1-201ENST00000217381 TRAV26-1A0A087WT03 109 aa16.92■□□□□ 0.3
SNTA1-201ENST00000217381 TRACP01848 142 aa16.91■□□□□ 0.3
SNTA1-201ENST00000217381 ANAPC13Q9BS18 74 aa16.91■□□□□ 0.3
SNTA1-201ENST00000217381 FAM222AQ5U5X8 452 aa16.91■□□□□ 0.3
SNTA1-201ENST00000217381 Q6Q795 121 aa16.91■□□□□ 0.3
SNTA1-201ENST00000217381 PF4P02776 101 aa16.9■□□□□ 0.3
SNTA1-201ENST00000217381 TRAV13-2A0A0B4J235 113 aa16.9■□□□□ 0.3
SNTA1-201ENST00000217381 FAM218AQ96MZ4 157 aa16.9■□□□□ 0.3
SNTA1-201ENST00000217381 SMR3AQ99954 134 aa16.89■□□□□ 0.29
SNTA1-201ENST00000217381 A0A087WZ39 114 aa16.88■□□□□ 0.29
SNTA1-201ENST00000217381 MRPL23Q16540 153 aaKnown RBP16.88■□□□□ 0.29
SNTA1-201ENST00000217381 IGKV2-28A0A075B6P5 120 aa16.88■□□□□ 0.29
SNTA1-201ENST00000217381 IGKV2D-28P01615 120 aa16.88■□□□□ 0.29
SNTA1-201ENST00000217381 DEFB130BP0DP73 79 aa16.88■□□□□ 0.29
SNTA1-201ENST00000217381 DEFB130AP0DP74 79 aa16.88■□□□□ 0.29
SNTA1-201ENST00000217381 LINC00337Q8N6G1 96 aa16.88■□□□□ 0.29
SNTA1-201ENST00000217381 KIR2DL5BQ8NHK3 375 aa16.88■□□□□ 0.29
SNTA1-201ENST00000217381 CRPP02741 224 aa16.87■□□□□ 0.29
SNTA1-201ENST00000217381 RPL28P46779 137 aaKnown RBP16.87■□□□□ 0.29
SNTA1-201ENST00000217381 TTC32Q5I0X7 151 aa16.87■□□□□ 0.29
SNTA1-201ENST00000217381 LINC00612Q8N6U2 182 aa16.87■□□□□ 0.29
SNTA1-201ENST00000217381 SND1-IT1Q9HBX3 110 aa16.87■□□□□ 0.29
SNTA1-201ENST00000217381 NHLRC4P0CG21 123 aaPredicted RBP16.85■□□□□ 0.29
SNTA1-201ENST00000217381 NDUFV3P56181 108 aaKnown RBP16.85■□□□□ 0.29
SNTA1-201ENST00000217381 LINC00158P58513 81 aa16.85■□□□□ 0.29
SNTA1-201ENST00000217381 C5orf38Q86SI9 138 aa16.85■□□□□ 0.29
SNTA1-201ENST00000217381 LINC00959A0A1B0GUT2 108 aa16.84■□□□□ 0.29
SNTA1-201ENST00000217381 IBA57-AS1B1ANH7 110 aa16.84■□□□□ 0.29
SNTA1-201ENST00000217381 C22orf24Q9Y442 160 aa16.84■□□□□ 0.29
SNTA1-201ENST00000217381 LINC00482Q8N8I6 264 aa16.83■□□□□ 0.28
SNTA1-201ENST00000217381 BAALC-AS2P0C853 105 aa16.82■□□□□ 0.28
SNTA1-201ENST00000217381 CCL18P55774 89 aa16.82■□□□□ 0.28
SNTA1-201ENST00000217381 GYPEP15421 78 aa16.82■□□□□ 0.28
SNTA1-201ENST00000217381 X6R8D5 127 aa16.8■□□□□ 0.28
SNTA1-201ENST00000217381 BAHCC1Q9P281 2608 aa16.8■□□□□ 0.28
SNTA1-201ENST00000217381 ACYP1P07311 99 aa16.79■□□□□ 0.28
SNTA1-201ENST00000217381 SMIM11BQ8TCY0 68 aa16.78■□□□□ 0.28
SNTA1-201ENST00000217381 PFN2P35080 140 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms