RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 TTC32Q5I0X7 151 aa9.42□□□□□ -0.9
SRP54-201ENST00000216774 OVOL2Q9BRP0 275 aa9.42□□□□□ -0.9
SRP54-201ENST00000216774 NHLRC4P0CG21 123 aaPredicted RBP9.41□□□□□ -0.9
SRP54-201ENST00000216774 ESM1Q9NQ30 184 aa9.41□□□□□ -0.9
SRP54-201ENST00000216774 GAGE7O76087 117 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 ACYP1P07311 99 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 GAGE12FP0CL80 117 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 GAGE12GP0CL81 117 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 GAGE12IP0CL82 117 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 FAM222AQ5U5X8 452 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 TRAV13-2A0A0B4J235 113 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
SRP54-201ENST00000216774 EPG5Q9HCE0 2579 aa9.4□□□□□ -0.91
SRP54-201ENST00000216774 AKAP9Q99996 3911 aa9.4□□□□□ -0.91
SRP54-201ENST00000216774 USP24Q9UPU5 2620 aa9.39□□□□□ -0.91
SRP54-201ENST00000216774 IGLV1-51P01701 117 aa9.39□□□□□ -0.91
SRP54-201ENST00000216774 GAGE6Q13070 117 aa9.39□□□□□ -0.91
SRP54-201ENST00000216774 HIST2H2BCQ6DN03 193 aa9.39□□□□□ -0.91
SRP54-201ENST00000216774 CSNK1G2-AS1Q8NCQ2 148 aa9.39□□□□□ -0.91
SRP54-201ENST00000216774 C19orf73Q9NVV2 129 aa9.39□□□□□ -0.91
SRP54-201ENST00000216774 TRGV4A0A0C4DH28 118 aa9.38□□□□□ -0.91
SRP54-201ENST00000216774 LOC100131303A0A0U1RQF7 123 aa9.38□□□□□ -0.91
SRP54-201ENST00000216774 C16orf95Q9H693 158 aa9.38□□□□□ -0.91
SRP54-201ENST00000216774 ZFYVE26Q68DK2 2539 aa9.38□□□□□ -0.91
SRP54-201ENST00000216774 WFDC11Q8NEX6 87 aa9.38□□□□□ -0.91
SRP54-201ENST00000216774 APCP25054 2843 aa9.37□□□□□ -0.91
SRP54-201ENST00000216774 TRBV6-8A0A0A6YYG3 113 aa9.37□□□□□ -0.91
SRP54-201ENST00000216774 RPL35AP18077 110 aaKnown RBP9.37□□□□□ -0.91
SRP54-201ENST00000216774 RPL28P46779 137 aaKnown RBP9.37□□□□□ -0.91
SRP54-201ENST00000216774 LINC01006Q8NI28 216 aa9.37□□□□□ -0.91
SRP54-201ENST00000216774 TRBV7-7A0A0K0K1E9 115 aa9.36□□□□□ -0.91
SRP54-201ENST00000216774 CRPP02741 224 aa9.36□□□□□ -0.91
SRP54-201ENST00000216774 WFDC10AQ9H1F0 79 aa9.36□□□□□ -0.91
SRP54-201ENST00000216774 MIR7-3HGQ8N6C7 128 aa9.36□□□□□ -0.91
SRP54-201ENST00000216774 ITPR3Q14573 2671 aa9.36□□□□□ -0.91
SRP54-201ENST00000216774 KMT2BQ9UMN6 2715 aaPredicted RBP9.36□□□□□ -0.91
SRP54-201ENST00000216774 IGHV3OR16-9A0A0B4J2B5 98 aa9.35□□□□□ -0.91
SRP54-201ENST00000216774 RNASE1P07998 156 aaKnown RBP9.35□□□□□ -0.91
SRP54-201ENST00000216774 BAALC-AS2P0C853 105 aa9.35□□□□□ -0.91
SRP54-201ENST00000216774 FHL2Q14192 279 aa9.35□□□□□ -0.91
SRP54-201ENST00000216774 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
SRP54-201ENST00000216774 SETXQ7Z333 2677 aaKnown RBP9.34□□□□□ -0.91
SRP54-201ENST00000216774 IGLV4-60A0A075B6I1 120 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 FAM218AQ96MZ4 157 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 NF1P21359 2839 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 TLN2Q9Y4G6 2542 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 A0A087WZ39 114 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 IBA57-AS1B1ANH7 110 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 LINC00337Q8N6G1 96 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 CHCHD5Q9BSY4 110 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
SRP54-201ENST00000216774 IGKV2-28A0A075B6P5 120 aa9.33□□□□□ -0.92
SRP54-201ENST00000216774 IGKV2D-28P01615 120 aa9.33□□□□□ -0.92
SRP54-201ENST00000216774 IMUPQ9GZP8 106 aa9.33□□□□□ -0.92
SRP54-201ENST00000216774 WNK1Q9H4A3 2382 aa9.33□□□□□ -0.92
SRP54-201ENST00000216774 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
SRP54-201ENST00000216774 ZNF469Q96JG9 3925 aaPredicted RBP9.32□□□□□ -0.92
SRP54-201ENST00000216774 INAFM2P0DMQ5 153 aa9.32□□□□□ -0.92
SRP54-201ENST00000216774 LINC00158P58513 81 aa9.32□□□□□ -0.92
SRP54-201ENST00000216774 NIPBLQ6KC79 2804 aaeCLIP9.32□□□□□ -0.92
SRP54-201ENST00000216774 IGKV3OR2-268A0A0C4DH90 116 aa9.31□□□□□ -0.92
SRP54-201ENST00000216774 SDIM1Q6ZPB5 146 aa9.31□□□□□ -0.92
SRP54-201ENST00000216774 B5MCH6 92 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 PLA2G2AP14555 144 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 CCL18P55774 89 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 LINC00643Q86TS7 51 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 SONP18583 2426 aaKnown RBP9.3□□□□□ -0.92
SRP54-201ENST00000216774 H0YGX0 51 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 MALP21145 153 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 KRTAP1-1Q07627 177 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 KIR2DL5BQ8NHK3 375 aa9.3□□□□□ -0.92
SRP54-201ENST00000216774 LINC00959A0A1B0GUT2 108 aa9.29□□□□□ -0.92
SRP54-201ENST00000216774 CCDC179H3BU77 68 aa9.29□□□□□ -0.92
SRP54-201ENST00000216774 LINC00612Q8N6U2 182 aa9.29□□□□□ -0.92
SRP54-201ENST00000216774 SMIM11BQ8TCY0 68 aa9.29□□□□□ -0.92
SRP54-201ENST00000216774 DNAL4O96015 105 aa9.28□□□□□ -0.92
SRP54-201ENST00000216774 SMCR5Q8TEV8 140 aa9.28□□□□□ -0.92
SRP54-201ENST00000216774 Q9HAA7 133 aa9.28□□□□□ -0.92
SRP54-201ENST00000216774 NOTCH3Q9UM47 2321 aa9.28□□□□□ -0.92
SRP54-201ENST00000216774 FLNAP21333 2647 aaKnown RBP9.28□□□□□ -0.92
SRP54-201ENST00000216774 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
SRP54-201ENST00000216774 C5orf38Q86SI9 138 aa9.28□□□□□ -0.92
SRP54-201ENST00000216774 JMJD1CQ15652 2540 aa9.27□□□□□ -0.93
SRP54-201ENST00000216774 A0A1B0GUV1 79 aa9.27□□□□□ -0.93
SRP54-201ENST00000216774 SS18L2Q9UHA2 77 aa9.26□□□□□ -0.93
SRP54-201ENST00000216774 DEFB130BP0DP73 79 aa9.26□□□□□ -0.93
SRP54-201ENST00000216774 DEFB130AP0DP74 79 aa9.26□□□□□ -0.93
SRP54-201ENST00000216774 PFN2P35080 140 aa9.26□□□□□ -0.93
SRP54-201ENST00000216774 C6orf226Q5I0X4 101 aa9.26□□□□□ -0.93
SRP54-201ENST00000216774 A0A087WYN8 130 aa9.25□□□□□ -0.93
SRP54-201ENST00000216774 SS18Q15532 418 aa9.25□□□□□ -0.93
SRP54-201ENST00000216774 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
SRP54-201ENST00000216774 GYPEP15421 78 aa9.25□□□□□ -0.93
SRP54-201ENST00000216774 Q8IZM0 81 aa9.25□□□□□ -0.93
SRP54-201ENST00000216774 PAX4O43316 350 aa9.24□□□□□ -0.93
SRP54-201ENST00000216774 LY6G6DO95868 133 aa9.24□□□□□ -0.93
SRP54-201ENST00000216774 HILS1P60008 231 aa9.24□□□□□ -0.93
SRP54-201ENST00000216774 CXCL5P42830 114 aa9.24□□□□□ -0.93
SRP54-201ENST00000216774 GAGE2AQ6NT46 116 aa9.24□□□□□ -0.93
SRP54-201ENST00000216774 OBSCN-AS1Q96MR7 158 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms