RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 CFC1BP0CG36 223 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 CFC1P0CG37 223 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 PRIMA1Q86XR5 153 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 SPANXDQ9BXN6 97 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 SPANXCQ9NY87 97 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 TIMM17BO60830 172 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 MUSTN1Q8IVN3 82 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 PGPEP1Q9NXJ5 209 aa20.66■□□□□ 0.9
PABPN1-201ENST00000216727 APOMO95445 188 aa20.65■□□□□ 0.9
PABPN1-201ENST00000216727 A0A1B0GUV1 79 aa20.65■□□□□ 0.9
PABPN1-201ENST00000216727 A4D1N5 150 aa20.63■□□□□ 0.89
PABPN1-201ENST00000216727 STAB1Q9NY15 2570 aa20.63■□□□□ 0.89
PABPN1-201ENST00000216727 TRAV26-1A0A087WT03 109 aa20.62■□□□□ 0.89
PABPN1-201ENST00000216727 TEX48A0A1B0GUV7 120 aa20.62■□□□□ 0.89
PABPN1-201ENST00000216727 ADAMTSL4-AS1Q5T5F5 129 aa20.62■□□□□ 0.89
PABPN1-201ENST00000216727 BAHCC1Q9P281 2608 aa20.62■□□□□ 0.89
PABPN1-201ENST00000216727 CYSRT1A8MQ03 144 aa20.61■□□□□ 0.89
PABPN1-201ENST00000216727 MIAQ16674 131 aa20.6■□□□□ 0.89
PABPN1-201ENST00000216727 A0A096LPF7 62 aa20.6■□□□□ 0.89
PABPN1-201ENST00000216727 TSPAN13O95857 204 aa20.6■□□□□ 0.89
PABPN1-201ENST00000216727 Q9H8V8 135 aa20.59■□□□□ 0.89
PABPN1-201ENST00000216727 TRAV16A0A0A6YYK6 109 aaPredicted RBP20.58■□□□□ 0.89
PABPN1-201ENST00000216727 PRO1854Q9UHT4 67 aa20.58■□□□□ 0.89
PABPN1-201ENST00000216727 A0A0B4J2C4 111 aa20.58■□□□□ 0.88
PABPN1-201ENST00000216727 TMEM262E9PQX1 116 aa20.58■□□□□ 0.88
PABPN1-201ENST00000216727 RBX1P62877 108 aa20.58■□□□□ 0.88
PABPN1-201ENST00000216727 IGHV3OR16-9A0A0B4J2B5 98 aa20.56■□□□□ 0.88
PABPN1-201ENST00000216727 IGKV3OR2-268A0A0C4DH90 116 aa20.56■□□□□ 0.88
PABPN1-201ENST00000216727 ZNF625Q96I27 306 aaPredicted RBP20.56■□□□□ 0.88
PABPN1-201ENST00000216727 CMYA5Q8N3K9 4069 aa20.56■□□□□ 0.88
PABPN1-201ENST00000216727 PRSS2P07478 247 aa20.56■□□□□ 0.88
PABPN1-201ENST00000216727 CIRBPQ14011 172 aaKnown RBP20.56■□□□□ 0.88
PABPN1-201ENST00000216727 LINC00959A0A1B0GUT2 108 aa20.54■□□□□ 0.88
PABPN1-201ENST00000216727 IFITM1P13164 125 aa20.54■□□□□ 0.88
PABPN1-201ENST00000216727 MRPL23Q16540 153 aaKnown RBP20.54■□□□□ 0.88
PABPN1-201ENST00000216727 EIF4EBP3O60516 100 aaPredicted RBP20.53■□□□□ 0.88
PABPN1-201ENST00000216727 SH2D6Q7Z4S9 175 aa20.53■□□□□ 0.88
PABPN1-201ENST00000216727 HERV-K104P63124 156 aa20.53■□□□□ 0.88
PABPN1-201ENST00000216727 MAST4O15021 2626 aa20.52■□□□□ 0.88
PABPN1-201ENST00000216727 A0A087WZ39 114 aa20.51■□□□□ 0.87
PABPN1-201ENST00000216727 PKD1L1Q8TDX9 2849 aa20.51■□□□□ 0.87
PABPN1-201ENST00000216727 HTN3P15516 51 aa20.5■□□□□ 0.87
PABPN1-201ENST00000216727 ICOSQ9Y6W8 199 aa20.49■□□□□ 0.87
PABPN1-201ENST00000216727 IGHV3-33P01772 117 aa20.48■□□□□ 0.87
PABPN1-201ENST00000216727 LYRM7Q5U5X0 104 aa20.48■□□□□ 0.87
PABPN1-201ENST00000216727 COX7B2Q8TF08 81 aa20.48■□□□□ 0.87
PABPN1-201ENST00000216727 RETNQ9HD89 108 aa20.48■□□□□ 0.87
PABPN1-201ENST00000216727 SS18Q15532 418 aa20.48■□□□□ 0.87
PABPN1-201ENST00000216727 G3V4G9 280 aa20.47■□□□□ 0.87
PABPN1-201ENST00000216727 LOC107984156A0A0G2JMH3 177 aa20.45■□□□□ 0.86
PABPN1-201ENST00000216727 H3BMG7 143 aa20.45■□□□□ 0.86
PABPN1-201ENST00000216727 ARL17AQ8IVW1 177 aa20.45■□□□□ 0.86
PABPN1-201ENST00000216727 C11orf68Q9H3H3 251 aaKnown RBP20.45■□□□□ 0.86
PABPN1-201ENST00000216727 ERG28Q9UKR5 140 aa20.44■□□□□ 0.86
PABPN1-201ENST00000216727 LELP1Q5T871 98 aa20.44■□□□□ 0.86
PABPN1-201ENST00000216727 DAND5Q8N907 189 aa20.44■□□□□ 0.86
PABPN1-201ENST00000216727 DNAH3Q8TD57 4116 aa20.43■□□□□ 0.86
PABPN1-201ENST00000216727 F8W1H4 67 aa20.43■□□□□ 0.86
PABPN1-201ENST00000216727 COPS9Q8WXC6 57 aa20.43■□□□□ 0.86
PABPN1-201ENST00000216727 NPC2P61916 151 aa20.42■□□□□ 0.86
PABPN1-201ENST00000216727 MEIG1Q5JSS6 88 aa20.42■□□□□ 0.86
PABPN1-201ENST00000216727 C5orf38Q86SI9 138 aa20.42■□□□□ 0.86
PABPN1-201ENST00000216727 LINC00308Q8TCZ7 52 aa20.42■□□□□ 0.86
PABPN1-201ENST00000216727 SFTA2Q6UW10 78 aa20.41■□□□□ 0.86
PABPN1-201ENST00000216727 LINC01561Q8N1V8 128 aa20.41■□□□□ 0.86
PABPN1-201ENST00000216727 ANK2Q01484 3957 aa20.41■□□□□ 0.86
PABPN1-201ENST00000216727 OCIAD2Q56VL3 154 aa20.4■□□□□ 0.86
PABPN1-201ENST00000216727 COL6A5A8TX70 2615 aa20.4■□□□□ 0.86
PABPN1-201ENST00000216727 H3BNG1 76 aa20.39■□□□□ 0.86
PABPN1-201ENST00000216727 XCL1P47992 114 aa20.39■□□□□ 0.86
PABPN1-201ENST00000216727 LINC00269Q8N2A0 174 aa20.39■□□□□ 0.86
PABPN1-201ENST00000216727 PPDPFQ9H3Y8 114 aa20.39■□□□□ 0.86
PABPN1-201ENST00000216727 TOMM7Q9P0U1 55 aa20.39■□□□□ 0.86
PABPN1-201ENST00000216727 TRBV20-1A0A075B6N2 111 aa20.38■□□□□ 0.85
PABPN1-201ENST00000216727 CLPSL2Q6UWE3 100 aa20.37■□□□□ 0.85
PABPN1-201ENST00000216727 ANGP03950 147 aaKnown RBP20.36■□□□□ 0.85
PABPN1-201ENST00000216727 A0A0U1RRA0 63 aa20.35■□□□□ 0.85
PABPN1-201ENST00000216727 PSMB2P49721 201 aa20.35■□□□□ 0.85
PABPN1-201ENST00000216727 REG3AQ06141 175 aa20.35■□□□□ 0.85
PABPN1-201ENST00000216727 PRO0461Q9UI25 63 aa20.35■□□□□ 0.85
PABPN1-201ENST00000216727 Q8N3U1 123 aa20.34■□□□□ 0.85
PABPN1-201ENST00000216727 CD164L2Q6UWJ8 174 aa20.34■□□□□ 0.85
PABPN1-201ENST00000216727 H7C2G1 150 aa20.33■□□□□ 0.85
PABPN1-201ENST00000216727 SCGB1C2P0DMR2 95 aa20.33■□□□□ 0.85
PABPN1-201ENST00000216727 Q1RN00 199 aa20.32■□□□□ 0.84
PABPN1-201ENST00000216727 LYPD5Q6UWN5 251 aa20.32■□□□□ 0.84
PABPN1-201ENST00000216727 SOSTDC1Q6X4U4 206 aa20.32■□□□□ 0.84
PABPN1-201ENST00000216727 TCL1BO95988 128 aa20.32■□□□□ 0.84
PABPN1-201ENST00000216727 Q6ZTC4 211 aa20.32■□□□□ 0.84
PABPN1-201ENST00000216727 TRBV30A0A0K0K1B3 111 aa20.31■□□□□ 0.84
PABPN1-201ENST00000216727 K7ERU9 68 aa20.31■□□□□ 0.84
PABPN1-201ENST00000216727 WFDC2Q14508 124 aa20.3■□□□□ 0.84
PABPN1-201ENST00000216727 Q8IZM0 81 aa20.3■□□□□ 0.84
PABPN1-201ENST00000216727 CHCHD10Q8WYQ3 142 aaPredicted RBP20.3■□□□□ 0.84
PABPN1-201ENST00000216727 IBA57-AS1B1ANH7 110 aa20.29■□□□□ 0.84
PABPN1-201ENST00000216727 KPRPQ5T749 579 aaPredicted RBP20.29■□□□□ 0.84
PABPN1-201ENST00000216727 A0A0J9YWU9 116 aa20.28■□□□□ 0.84
PABPN1-201ENST00000216727 C6orf226Q5I0X4 101 aa20.28■□□□□ 0.84
PABPN1-201ENST00000216727 COX7A2LO14548 114 aa20.26■□□□□ 0.83
PABPN1-201ENST00000216727 PRR34Q9NV39 138 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms