RNA–Protein interactions for RNA: ENST00000215794.7

USP18-201, Transcript of ubiquitin specific peptidase 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP18, Length 2,129 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP18-201ENST00000215794 EGFEM1PQ0D2K5 195 aa12.77□□□□□ -0.36
USP18-201ENST00000215794 TRAV26-1A0A087WT03 109 aa12.77□□□□□ -0.37
USP18-201ENST00000215794 LINC00242Q5T6M2 205 aa12.76□□□□□ -0.37
USP18-201ENST00000215794 TRAV13-1A0A0B4J241 112 aa12.75□□□□□ -0.37
USP18-201ENST00000215794 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
USP18-201ENST00000215794 TMEM243Q9BU79 118 aa12.75□□□□□ -0.37
USP18-201ENST00000215794 IGLV5-45A0A087WSX0 123 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 CFC1BP0CG36 223 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 CFC1P0CG37 223 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 TIRAPP58753 221 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 CDC42SE2Q9NRR3 84 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 NDUFA12Q9UI09 145 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
USP18-201ENST00000215794 UBE2L6O14933 153 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 TSPAN13O95857 204 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 FOXI1Q12951 378 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 SFTA2Q6UW10 78 aa12.74□□□□□ -0.37
USP18-201ENST00000215794 IGHV4-30-4P0DP06 118 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 KRTAP21-3Q3LHN1 58 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 MUSTN1Q8IVN3 82 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 KIR2DL5BQ8NHK3 375 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 LITAFQ99732 161 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 DEFB135Q30KP9 77 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 LINC00612Q8N6U2 182 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 TMEM101Q96IK0 257 aa12.73□□□□□ -0.37
USP18-201ENST00000215794 A4D1N5 150 aa12.72□□□□□ -0.37
USP18-201ENST00000215794 EIF4EBP3O60516 100 aaPredicted RBP12.72□□□□□ -0.37
USP18-201ENST00000215794 DEFB4AO15263 64 aa12.71□□□□□ -0.37
USP18-201ENST00000215794 HERVK_113P63121 156 aa12.71□□□□□ -0.38
USP18-201ENST00000215794 GAGE6Q13070 117 aa12.71□□□□□ -0.38
USP18-201ENST00000215794 ADAMTSL4-AS1Q5T5F5 129 aa12.71□□□□□ -0.38
USP18-201ENST00000215794 ZFAND6Q6FIF0 208 aa12.71□□□□□ -0.38
USP18-201ENST00000215794 FAM19A3Q7Z5A8 133 aa12.7□□□□□ -0.38
USP18-201ENST00000215794 FAM222AQ5U5X8 452 aa12.69□□□□□ -0.38
USP18-201ENST00000215794 TRBV6-8A0A0A6YYG3 113 aa12.68□□□□□ -0.38
USP18-201ENST00000215794 TRBV20-1A0A075B6N2 111 aa12.68□□□□□ -0.38
USP18-201ENST00000215794 SMIM9A6NGZ8 99 aa12.68□□□□□ -0.38
USP18-201ENST00000215794 IGLV4-60A0A075B6I1 120 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 NPC2P61916 151 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 PPDPFLQ8WWR9 84 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 LOC107984156A0A0G2JMH3 177 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 IGLV5-39A0A0G2JS06 123 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 GYPEP15421 78 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 ARL17AQ8IVW1 177 aa12.67□□□□□ -0.38
USP18-201ENST00000215794 IGKV3OR2-268A0A0C4DH90 116 aa12.66□□□□□ -0.38
USP18-201ENST00000215794 CHCHD5Q9BSY4 110 aa12.66□□□□□ -0.38
USP18-201ENST00000215794 PRO1854Q9UHT4 67 aa12.66□□□□□ -0.38
USP18-201ENST00000215794 PRSS2P07478 247 aa12.65□□□□□ -0.38
USP18-201ENST00000215794 F5H768 121 aa12.65□□□□□ -0.38
USP18-201ENST00000215794 H7C423 109 aa12.65□□□□□ -0.38
USP18-201ENST00000215794 K7EIL1 84 aa12.65□□□□□ -0.38
USP18-201ENST00000215794 NDUFA1O15239 70 aa12.65□□□□□ -0.38
USP18-201ENST00000215794 APOC4P55056 127 aa12.65□□□□□ -0.38
USP18-201ENST00000215794 DAND5Q8N907 189 aa12.65□□□□□ -0.38
USP18-201ENST00000215794 A0A096LPF7 62 aa12.64□□□□□ -0.39
USP18-201ENST00000215794 IGHV4-28A0A0C4DH34 117 aa12.64□□□□□ -0.39
USP18-201ENST00000215794 TMEM262E9PQX1 116 aa12.64□□□□□ -0.39
USP18-201ENST00000215794 SPANXDQ9BXN6 97 aa12.64□□□□□ -0.39
USP18-201ENST00000215794 SPANXCQ9NY87 97 aa12.64□□□□□ -0.39
USP18-201ENST00000215794 ZNF625Q96I27 306 aaPredicted RBP12.64□□□□□ -0.39
USP18-201ENST00000215794 CDIP1Q9H305 208 aa12.64□□□□□ -0.39
USP18-201ENST00000215794 Q9H8V8 135 aa12.64□□□□□ -0.39
USP18-201ENST00000215794 PSMB2P49721 201 aa12.63□□□□□ -0.39
USP18-201ENST00000215794 MIAQ16674 131 aa12.63□□□□□ -0.39
USP18-201ENST00000215794 KPRPQ5T749 579 aaPredicted RBP12.63□□□□□ -0.39
USP18-201ENST00000215794 TEN1Q86WV5 123 aa12.63□□□□□ -0.39
USP18-201ENST00000215794 H7C2G1 150 aa12.62□□□□□ -0.39
USP18-201ENST00000215794 A0A0B4J2C4 111 aa12.62□□□□□ -0.39
USP18-201ENST00000215794 LYRM9A8MSI8 78 aa12.62□□□□□ -0.39
USP18-201ENST00000215794 DEFB121Q5J5C9 76 aa12.62□□□□□ -0.39
USP18-201ENST00000215794 PRO0255Q9UI72 69 aa12.62□□□□□ -0.39
USP18-201ENST00000215794 M0QXV9 152 aa12.61□□□□□ -0.39
USP18-201ENST00000215794 IGHV3-33P01772 117 aa12.61□□□□□ -0.39
USP18-201ENST00000215794 SMCPP49901 116 aaPredicted RBP12.61□□□□□ -0.39
USP18-201ENST00000215794 RETNQ9HD89 108 aa12.61□□□□□ -0.39
USP18-201ENST00000215794 CELA1Q9UNI1 258 aa12.61□□□□□ -0.39
USP18-201ENST00000215794 MRAPQ8TCY5 172 aa12.61□□□□□ -0.39
USP18-201ENST00000215794 A0A0U1RRA0 63 aa12.6□□□□□ -0.39
USP18-201ENST00000215794 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.59□□□□□ -0.39
USP18-201ENST00000215794 Q8NAQ8 132 aa12.59□□□□□ -0.39
USP18-201ENST00000215794 PAX4O43316 350 aa12.58□□□□□ -0.4
USP18-201ENST00000215794 TIMM17BO60830 172 aa12.58□□□□□ -0.4
USP18-201ENST00000215794 TCL1BO95988 128 aa12.58□□□□□ -0.4
USP18-201ENST00000215794 HERV-K104P63124 156 aa12.58□□□□□ -0.4
USP18-201ENST00000215794 ERG28Q9UKR5 140 aa12.58□□□□□ -0.4
USP18-201ENST00000215794 TENM3Q9P273 2699 aa12.57□□□□□ -0.4
USP18-201ENST00000215794 MEGF8Q7Z7M0 2845 aa12.57□□□□□ -0.4
USP18-201ENST00000215794 DAD1P61803 113 aa12.56□□□□□ -0.4
USP18-201ENST00000215794 SCGB1C2P0DMR2 95 aa12.55□□□□□ -0.4
USP18-201ENST00000215794 Q1RN00 199 aa12.55□□□□□ -0.4
USP18-201ENST00000215794 MIFP14174 115 aa12.55□□□□□ -0.4
USP18-201ENST00000215794 RNF183Q96D59 192 aa12.55□□□□□ -0.4
USP18-201ENST00000215794 MT-ATP8P03928 68 aa12.54□□□□□ -0.4
USP18-201ENST00000215794 CIRBPQ14011 172 aaKnown RBP12.54□□□□□ -0.4
USP18-201ENST00000215794 CARD19Q96LW7 228 aa12.54□□□□□ -0.4
USP18-201ENST00000215794 PRKDCP78527 4128 aaKnown RBP12.53□□□□□ -0.4
USP18-201ENST00000215794 IGHV3OR16-9A0A0B4J2B5 98 aa12.53□□□□□ -0.4
USP18-201ENST00000215794 CLPSL2Q6UWE3 100 aa12.53□□□□□ -0.4
USP18-201ENST00000215794 LINC00959A0A1B0GUT2 108 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms