RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 H7C423 109 aa13.76□□□□□ -0.21
MBD3-201ENST00000156825 SDIM1Q6ZPB5 146 aa13.76□□□□□ -0.21
MBD3-201ENST00000156825 NANOS2P60321 138 aaKnown RBP13.76□□□□□ -0.21
MBD3-201ENST00000156825 C14orf177Q52M58 125 aa13.75□□□□□ -0.21
MBD3-201ENST00000156825 IL17DQ8TAD2 202 aa13.75□□□□□ -0.21
MBD3-201ENST00000156825 UBE2D4Q9Y2X8 147 aa13.75□□□□□ -0.21
MBD3-201ENST00000156825 CHKB-CPT1BH3BT56 60 aa13.75□□□□□ -0.21
MBD3-201ENST00000156825 BPY2O14599 106 aa13.74□□□□□ -0.21
MBD3-201ENST00000156825 IGHV4-30-4P0DP06 118 aa13.74□□□□□ -0.21
MBD3-201ENST00000156825 TMEM258P61165 79 aa13.74□□□□□ -0.21
MBD3-201ENST00000156825 PPDPFQ9H3Y8 114 aa13.74□□□□□ -0.21
MBD3-201ENST00000156825 RETNQ9HD89 108 aa13.74□□□□□ -0.21
MBD3-201ENST00000156825 PYGO1Q9Y3Y4 419 aa13.74□□□□□ -0.21
MBD3-201ENST00000156825 LINC00959A0A1B0GUT2 108 aa13.73□□□□□ -0.21
MBD3-201ENST00000156825 TRAV10A0A0B4J240 114 aa13.73□□□□□ -0.21
MBD3-201ENST00000156825 MRPS12O15235 138 aaKnown RBP13.73□□□□□ -0.21
MBD3-201ENST00000156825 F8P00451 2351 aa13.73□□□□□ -0.21
MBD3-201ENST00000156825 MT-ATP8P03928 68 aa13.73□□□□□ -0.21
MBD3-201ENST00000156825 RAI1Q7Z5J4 1906 aaPredicted RBP13.73□□□□□ -0.21
MBD3-201ENST00000156825 H3BQ85 93 aa13.73□□□□□ -0.21
MBD3-201ENST00000156825 C1orf158Q8N1D5 194 aa13.72□□□□□ -0.21
MBD3-201ENST00000156825 A0A0J9YWU9 116 aa13.71□□□□□ -0.21
MBD3-201ENST00000156825 C2orf91Q6ZV80 131 aa13.71□□□□□ -0.21
MBD3-201ENST00000156825 CD164L2Q6UWJ8 174 aa13.71□□□□□ -0.21
MBD3-201ENST00000156825 SPANXB1Q9NS25 103 aaPredicted RBP13.71□□□□□ -0.21
MBD3-201ENST00000156825 UPK3BQ9BT76 320 aa13.71□□□□□ -0.22
MBD3-201ENST00000156825 LINC00643Q86TS7 51 aa13.71□□□□□ -0.22
MBD3-201ENST00000156825 CRIP2P52943 208 aaPredicted RBP13.7□□□□□ -0.22
MBD3-201ENST00000156825 POM121L12Q8N7R1 296 aa13.7□□□□□ -0.22
MBD3-201ENST00000156825 MUC4Q99102 2169 aa13.7□□□□□ -0.22
MBD3-201ENST00000156825 EML5Q05BV3 1969 aa13.7□□□□□ -0.22
MBD3-201ENST00000156825 LINC00310P59036 64 aa13.69□□□□□ -0.22
MBD3-201ENST00000156825 RPL37AP8A6NKH3 93 aa13.69□□□□□ -0.22
MBD3-201ENST00000156825 C3orf84H3BNL1 204 aa13.68□□□□□ -0.22
MBD3-201ENST00000156825 BRI3O95415 125 aa13.68□□□□□ -0.22
MBD3-201ENST00000156825 Q6ZQY7 126 aa13.68□□□□□ -0.22
MBD3-201ENST00000156825 PDE6GP18545 87 aa13.67□□□□□ -0.22
MBD3-201ENST00000156825 LELP1Q5T871 98 aa13.67□□□□□ -0.22
MBD3-201ENST00000156825 TET2Q6N021 2002 aaPredicted RBP13.67□□□□□ -0.22
MBD3-201ENST00000156825 IGKV4-1P06312 121 aa13.67□□□□□ -0.22
MBD3-201ENST00000156825 UBE2D1P51668 147 aa13.67□□□□□ -0.22
MBD3-201ENST00000156825 URB1-AS1Q96HZ7 61 aa13.67□□□□□ -0.22
MBD3-201ENST00000156825 MRGPRG-AS1Q2M3A8 158 aa13.66□□□□□ -0.22
MBD3-201ENST00000156825 UBE2D3P61077 147 aa13.66□□□□□ -0.22
MBD3-201ENST00000156825 UBE2D2P62837 147 aa13.66□□□□□ -0.22
MBD3-201ENST00000156825 ENHOQ6UWT2 76 aa13.66□□□□□ -0.22
MBD3-201ENST00000156825 CCKP06307 115 aa13.65□□□□□ -0.22
MBD3-201ENST00000156825 KIR2DL5BQ8NHK3 375 aa13.65□□□□□ -0.22
MBD3-201ENST00000156825 C20orf197Q8N268 126 aa13.65□□□□□ -0.22
MBD3-201ENST00000156825 CDC42SE2Q9NRR3 84 aa13.65□□□□□ -0.22
MBD3-201ENST00000156825 TRBV30A0A0K0K1B3 111 aa13.64□□□□□ -0.23
MBD3-201ENST00000156825 CNFNQ9BYD5 112 aa13.64□□□□□ -0.23
MBD3-201ENST00000156825 LY6G6CO95867 125 aa13.64□□□□□ -0.23
MBD3-201ENST00000156825 ANKRD17O75179 2603 aaKnown RBP13.63□□□□□ -0.23
MBD3-201ENST00000156825 C9orf116Q5BN46 136 aaPredicted RBP13.63□□□□□ -0.23
MBD3-201ENST00000156825 IGIPA6NJ69 53 aa13.62□□□□□ -0.23
MBD3-201ENST00000156825 IGLV4-69A0A075B6H9 119 aa13.62□□□□□ -0.23
MBD3-201ENST00000156825 SMIM11BQ8TCY0 68 aa13.62□□□□□ -0.23
MBD3-201ENST00000156825 AGRNO00468 2067 aa13.62□□□□□ -0.23
MBD3-201ENST00000156825 LINC00242Q5T6M2 205 aa13.62□□□□□ -0.23
MBD3-201ENST00000156825 SPINK6Q6UWN8 80 aa13.61□□□□□ -0.23
MBD3-201ENST00000156825 CYSRT1A8MQ03 144 aa13.61□□□□□ -0.23
MBD3-201ENST00000156825 LINC00694P0DN24 101 aa13.61□□□□□ -0.23
MBD3-201ENST00000156825 IGLV1-51P01701 117 aa13.61□□□□□ -0.23
MBD3-201ENST00000156825 HRCT1Q6UXD1 115 aa13.61□□□□□ -0.23
MBD3-201ENST00000156825 UNQ6190/PRO20217Q6UXQ8 127 aa13.61□□□□□ -0.23
MBD3-201ENST00000156825 USP24Q9UPU5 2620 aa13.6□□□□□ -0.23
MBD3-201ENST00000156825 WFDC10BQ8IUB3 73 aa13.6□□□□□ -0.23
MBD3-201ENST00000156825 IGLV4-60A0A075B6I1 120 aa13.59□□□□□ -0.23
MBD3-201ENST00000156825 MRPS36P82909 103 aaKnown RBP13.59□□□□□ -0.23
MBD3-201ENST00000156825 ZNF580Q9UK33 172 aa13.59□□□□□ -0.23
MBD3-201ENST00000156825 NDUFV3P56181 108 aaKnown RBP13.56□□□□□ -0.24
MBD3-201ENST00000156825 PRR3P79522 188 aaKnown RBP13.56□□□□□ -0.24
MBD3-201ENST00000156825 COX6A2Q02221 97 aa13.56□□□□□ -0.24
MBD3-201ENST00000156825 Q6ZTC4 211 aa13.56□□□□□ -0.24
MBD3-201ENST00000156825 CPAMD8Q8IZJ3 1885 aa13.56□□□□□ -0.24
MBD3-201ENST00000156825 Q6ZSN1 163 aa13.55□□□□□ -0.24
MBD3-201ENST00000156825 TIMM17BO60830 172 aa13.55□□□□□ -0.24
MBD3-201ENST00000156825 M0R378 163 aa13.54□□□□□ -0.24
MBD3-201ENST00000156825 LST1O00453 97 aa13.53□□□□□ -0.24
MBD3-201ENST00000156825 TSPEAR-AS2P59090 65 aa13.53□□□□□ -0.24
MBD3-201ENST00000156825 CHCHD7Q9BUK0 85 aa13.52□□□□□ -0.24
MBD3-201ENST00000156825 SMIM1B2RUZ4 78 aa13.52□□□□□ -0.25
MBD3-201ENST00000156825 ZNF73O43830 326 aaPredicted RBP13.51□□□□□ -0.25
MBD3-201ENST00000156825 WFDC13Q8IUB5 93 aa13.51□□□□□ -0.25
MBD3-201ENST00000156825 Q8IZM0 81 aa13.51□□□□□ -0.25
MBD3-201ENST00000156825 IGLV9-49A0A0B4J1Y8 123 aa13.5□□□□□ -0.25
MBD3-201ENST00000156825 J3KT08 172 aa13.5□□□□□ -0.25
MBD3-201ENST00000156825 FHL2Q14192 279 aa13.5□□□□□ -0.25
MBD3-201ENST00000156825 C7orf33Q8WU49 177 aa13.5□□□□□ -0.25
MBD3-201ENST00000156825 ADAMTS20P59510 1910 aa13.49□□□□□ -0.25
MBD3-201ENST00000156825 HECTD1Q9ULT8 2610 aa13.49□□□□□ -0.25
MBD3-201ENST00000156825 A0A096LNJ9 63 aa13.48□□□□□ -0.25
MBD3-201ENST00000156825 LOC107984640A0A0U1RRK4 108 aa13.47□□□□□ -0.25
MBD3-201ENST00000156825 USP17L23D6RBM5 183 aa13.46□□□□□ -0.25
MBD3-201ENST00000156825 ADAMTSL4-AS1Q5T5F5 129 aa13.46□□□□□ -0.25
MBD3-201ENST00000156825 C6orf223Q8N319 242 aa13.46□□□□□ -0.26
MBD3-201ENST00000156825 MPLKIPQ8TAP9 179 aa13.46□□□□□ -0.26
MBD3-201ENST00000156825 PRR4Q16378 134 aa13.45□□□□□ -0.26
MBD3-201ENST00000156825 MGAM2Q2M2H8 2515 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms