RNA–Protein interactions for RNA: ENST00000054950.3

RCN1-201, Transcript of reticulocalbin 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCN1, Length 2,572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-201ENST00000054950 DAZ2Q13117 558 aaKnown RBP14.39□□□□□ -0.11
RCN1-201ENST00000054950 DAZ4Q86SG3 579 aaKnown RBP14.39□□□□□ -0.11
RCN1-201ENST00000054950 DAZ3Q9NR90 486 aaKnown RBP14.39□□□□□ -0.11
RCN1-201ENST00000054950 PLA2G2AP14555 144 aa14.38□□□□□ -0.11
RCN1-201ENST00000054950 C3orf56Q8N813 242 aa14.38□□□□□ -0.11
RCN1-201ENST00000054950 WFDC10AQ9H1F0 79 aa14.38□□□□□ -0.11
RCN1-201ENST00000054950 Q9HAA7 133 aa14.38□□□□□ -0.11
RCN1-201ENST00000054950 C22orf24Q9Y442 160 aa14.37□□□□□ -0.11
RCN1-201ENST00000054950 FAM19A3Q7Z5A8 133 aa14.36□□□□□ -0.11
RCN1-201ENST00000054950 TOMM7Q9P0U1 55 aa14.36□□□□□ -0.11
RCN1-201ENST00000054950 BAALC-AS2P0C853 105 aa14.35□□□□□ -0.11
RCN1-201ENST00000054950 CSDC2Q9Y534 153 aaKnown RBP14.35□□□□□ -0.11
RCN1-201ENST00000054950 MRPL23Q16540 153 aaKnown RBP14.35□□□□□ -0.11
RCN1-201ENST00000054950 UBE2L6O14933 153 aa14.34□□□□□ -0.11
RCN1-201ENST00000054950 TRBV10-1A0A0K0K1A3 114 aa14.33□□□□□ -0.11
RCN1-201ENST00000054950 MIR7-3HGQ8N6C7 128 aa14.33□□□□□ -0.11
RCN1-201ENST00000054950 CCDC168Q8NDH2 2452 aa14.33□□□□□ -0.12
RCN1-201ENST00000054950 LINC00337Q8N6G1 96 aa14.33□□□□□ -0.12
RCN1-201ENST00000054950 TRBV7-7A0A0K0K1E9 115 aa14.32□□□□□ -0.12
RCN1-201ENST00000054950 TMEM243Q9BU79 118 aa14.32□□□□□ -0.12
RCN1-201ENST00000054950 FAM236AA0A1B0GUQ0 79 aa14.32□□□□□ -0.12
RCN1-201ENST00000054950 FAM236BA0A1B0GV22 79 aa14.32□□□□□ -0.12
RCN1-201ENST00000054950 GIG44P09565 113 aaPredicted RBP14.3□□□□□ -0.12
RCN1-201ENST00000054950 IGKV2-28A0A075B6P5 120 aa14.3□□□□□ -0.12
RCN1-201ENST00000054950 TRGV2A0A075B6R0 118 aa14.3□□□□□ -0.12
RCN1-201ENST00000054950 IGKV2D-28P01615 120 aa14.3□□□□□ -0.12
RCN1-201ENST00000054950 RPL35AP18077 110 aaKnown RBP14.3□□□□□ -0.12
RCN1-201ENST00000054950 HERV-K104P63124 156 aa14.3□□□□□ -0.12
RCN1-201ENST00000054950 ITPR3Q14573 2671 aa14.3□□□□□ -0.12
RCN1-201ENST00000054950 IGLV4-60A0A075B6I1 120 aa14.29□□□□□ -0.12
RCN1-201ENST00000054950 TRACP01848 142 aa14.29□□□□□ -0.12
RCN1-201ENST00000054950 COPS9Q8WXC6 57 aa14.29□□□□□ -0.12
RCN1-201ENST00000054950 COX7B2Q8TF08 81 aa14.29□□□□□ -0.12
RCN1-201ENST00000054950 PLAC8L1A1L4L8 177 aa14.29□□□□□ -0.12
RCN1-201ENST00000054950 CCL24O00175 119 aa14.28□□□□□ -0.12
RCN1-201ENST00000054950 C9orf129Q5T035 196 aaKnown RBP14.28□□□□□ -0.12
RCN1-201ENST00000054950 APCP25054 2843 aa14.28□□□□□ -0.12
RCN1-201ENST00000054950 CRPP02741 224 aa14.28□□□□□ -0.12
RCN1-201ENST00000054950 HIST2H2BCQ6DN03 193 aa14.28□□□□□ -0.12
RCN1-201ENST00000054950 SND1-IT1Q9HBX3 110 aa14.28□□□□□ -0.12
RCN1-201ENST00000054950 A0A087WYN8 130 aa14.27□□□□□ -0.13
RCN1-201ENST00000054950 LINC00158P58513 81 aa14.27□□□□□ -0.13
RCN1-201ENST00000054950 SVIPQ8NHG7 77 aa14.27□□□□□ -0.13
RCN1-201ENST00000054950 GAGE2AQ6NT46 116 aa14.26□□□□□ -0.13
RCN1-201ENST00000054950 C11orf68Q9H3H3 251 aaKnown RBP14.26□□□□□ -0.13
RCN1-201ENST00000054950 PFN2P35080 140 aa14.25□□□□□ -0.13
RCN1-201ENST00000054950 ACYP1P07311 99 aa14.25□□□□□ -0.13
RCN1-201ENST00000054950 FN1P02751 2386 aaKnown RBP14.25□□□□□ -0.13
RCN1-201ENST00000054950 DEFB113Q30KQ7 82 aa14.24□□□□□ -0.13
RCN1-201ENST00000054950 C5orf38Q86SI9 138 aa14.24□□□□□ -0.13
RCN1-201ENST00000054950 SMIM20Q8N5G0 67 aa14.24□□□□□ -0.13
RCN1-201ENST00000054950 SMIM11BQ8TCY0 68 aa14.24□□□□□ -0.13
RCN1-201ENST00000054950 TRAV25A0A0B4J276 109 aa14.24□□□□□ -0.13
RCN1-201ENST00000054950 DNAJC9-AS1A6NH13 148 aa14.24□□□□□ -0.13
RCN1-201ENST00000054950 ATP5G1P05496 136 aa14.24□□□□□ -0.13
RCN1-201ENST00000054950 RPL28P46779 137 aaKnown RBP14.24□□□□□ -0.13
RCN1-201ENST00000054950 UBR5O95071 2799 aaPredicted RBP14.23□□□□□ -0.13
RCN1-201ENST00000054950 TRAV13-2A0A0B4J235 113 aa14.23□□□□□ -0.13
RCN1-201ENST00000054950 TRGV4A0A0C4DH28 118 aa14.23□□□□□ -0.13
RCN1-201ENST00000054950 MALP21145 153 aa14.23□□□□□ -0.13
RCN1-201ENST00000054950 FLNAP21333 2647 aaKnown RBP14.23□□□□□ -0.13
RCN1-201ENST00000054950 CCL18P55774 89 aa14.23□□□□□ -0.13
RCN1-201ENST00000054950 ESM1Q9NQ30 184 aa14.23□□□□□ -0.13
RCN1-201ENST00000054950 USP24Q9UPU5 2620 aa14.22□□□□□ -0.13
RCN1-201ENST00000054950 LINC00643Q86TS7 51 aa14.21□□□□□ -0.13
RCN1-201ENST00000054950 IGHV3OR16-9A0A0B4J2B5 98 aa14.19□□□□□ -0.14
RCN1-201ENST00000054950 C16orf74Q96GX8 76 aa14.19□□□□□ -0.14
RCN1-201ENST00000054950 BBC3Q96PG8 261 aaPredicted RBP14.19□□□□□ -0.14
RCN1-201ENST00000054950 KRTAP1-3Q8IUG1 177 aa14.19□□□□□ -0.14
RCN1-201ENST00000054950 C14orf132Q9NPU4 83 aa14.19□□□□□ -0.14
RCN1-201ENST00000054950 MTORP42345 2549 aa14.18□□□□□ -0.14
RCN1-201ENST00000054950 FAM222AQ5U5X8 452 aa14.18□□□□□ -0.14
RCN1-201ENST00000054950 TRBV6-8A0A0A6YYG3 113 aa14.18□□□□□ -0.14
RCN1-201ENST00000054950 TRBV6-4A0A1B0GX49 114 aa14.18□□□□□ -0.14
RCN1-201ENST00000054950 ACANP16112 2415 aa14.17□□□□□ -0.14
RCN1-201ENST00000054950 SLPIP03973 132 aa14.17□□□□□ -0.14
RCN1-201ENST00000054950 NBEAL2Q6ZNJ1 2754 aa14.17□□□□□ -0.14
RCN1-201ENST00000054950 DNAL4O96015 105 aa14.17□□□□□ -0.14
RCN1-201ENST00000054950 PF4P02776 101 aa14.17□□□□□ -0.14
RCN1-201ENST00000054950 SDIM1Q6ZPB5 146 aa14.17□□□□□ -0.14
RCN1-201ENST00000054950 FHL2Q14192 279 aa14.16□□□□□ -0.14
RCN1-201ENST00000054950 IMUPQ9GZP8 106 aa14.16□□□□□ -0.14
RCN1-201ENST00000054950 PAX4O43316 350 aa14.16□□□□□ -0.14
RCN1-201ENST00000054950 CLPSL2Q6UWE3 100 aa14.16□□□□□ -0.14
RCN1-201ENST00000054950 OR13C6PQ8NH95 151 aa14.16□□□□□ -0.14
RCN1-201ENST00000054950 LECT2O14960 151 aa14.15□□□□□ -0.14
RCN1-201ENST00000054950 INAFM2P0DMQ5 153 aa14.15□□□□□ -0.14
RCN1-201ENST00000054950 CSNK1G2-AS1Q8NCQ2 148 aa14.15□□□□□ -0.14
RCN1-201ENST00000054950 C19orf73Q9NVV2 129 aa14.15□□□□□ -0.14
RCN1-201ENST00000054950 GCN1Q92616 2671 aaKnown RBP14.15□□□□□ -0.14
RCN1-201ENST00000054950 WFDC11Q8NEX6 87 aa14.14□□□□□ -0.15
RCN1-201ENST00000054950 DEFB130BP0DP73 79 aa14.14□□□□□ -0.15
RCN1-201ENST00000054950 DEFB130AP0DP74 79 aa14.14□□□□□ -0.15
RCN1-201ENST00000054950 XCL1P47992 114 aa14.13□□□□□ -0.15
RCN1-201ENST00000054950 A0A087WZ39 114 aa14.12□□□□□ -0.15
RCN1-201ENST00000054950 NCR3O14931 201 aa14.12□□□□□ -0.15
RCN1-201ENST00000054950 PPDPFQ9H3Y8 114 aa14.12□□□□□ -0.15
RCN1-201ENST00000054950 A0A096LPF7 62 aa14.11□□□□□ -0.15
RCN1-201ENST00000054950 LRRC75A-AS1Q8N1F1 130 aa14.11□□□□□ -0.15
RCN1-201ENST00000054950 LINC00959A0A1B0GUT2 108 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms