RNA–Protein interactions for RNA: ENST00000040877.1

TARBP1-201, Transcript of TAR (HIV-1) RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARBP1, Length 5,130 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARBP1-201ENST00000040877 DHRS4-AS1Q9P1J3 65 aa16.86■□□□□ 0.29
TARBP1-201ENST00000040877 Q8IZM0 81 aa16.86■□□□□ 0.29
TARBP1-201ENST00000040877 UPK3BQ9BT76 320 aa16.86■□□□□ 0.29
TARBP1-201ENST00000040877 C20orf197Q8N268 126 aa16.86■□□□□ 0.29
TARBP1-201ENST00000040877 CDC42SE2Q9NRR3 84 aa16.86■□□□□ 0.29
TARBP1-201ENST00000040877 ARHGAP32A7KAX9 2087 aa16.85■□□□□ 0.29
TARBP1-201ENST00000040877 LOC107984640A0A0U1RRK4 108 aa16.85■□□□□ 0.29
TARBP1-201ENST00000040877 OXLD1Q5BKU9 147 aa16.85■□□□□ 0.29
TARBP1-201ENST00000040877 ZNF706Q9Y5V0 76 aaPredicted RBP16.84■□□□□ 0.29
TARBP1-201ENST00000040877 COX8CQ7Z4L0 72 aa16.84■□□□□ 0.29
TARBP1-201ENST00000040877 A0A0J9YWU9 116 aa16.81■□□□□ 0.28
TARBP1-201ENST00000040877 LINC00310P59036 64 aa16.81■□□□□ 0.28
TARBP1-201ENST00000040877 LINC00474Q9P2X8 69 aa16.81■□□□□ 0.28
TARBP1-201ENST00000040877 SMR3AQ99954 134 aa16.81■□□□□ 0.28
TARBP1-201ENST00000040877 IGIPA6NJ69 53 aa16.81■□□□□ 0.28
TARBP1-201ENST00000040877 A8MZ25 164 aa16.8■□□□□ 0.28
TARBP1-201ENST00000040877 PRM2P04554 102 aa16.8■□□□□ 0.28
TARBP1-201ENST00000040877 SLPIP03973 132 aa16.79■□□□□ 0.28
TARBP1-201ENST00000040877 A0A096LNI7 61 aa16.79■□□□□ 0.28
TARBP1-201ENST00000040877 XGP55808 180 aa16.79■□□□□ 0.28
TARBP1-201ENST00000040877 NANOS2P60321 138 aaKnown RBP16.79■□□□□ 0.28
TARBP1-201ENST00000040877 IGLV2-18A0A075B6J9 118 aa16.78■□□□□ 0.28
TARBP1-201ENST00000040877 FAM236DA0A1B0GTK5 79 aa16.78■□□□□ 0.28
TARBP1-201ENST00000040877 FAM236CP0DP71 79 aa16.78■□□□□ 0.28
TARBP1-201ENST00000040877 GAS8-AS1O95177 125 aa16.77■□□□□ 0.27
TARBP1-201ENST00000040877 IGKV4-1P06312 121 aa16.76■□□□□ 0.27
TARBP1-201ENST00000040877 LRCOL1A6NCL2 159 aa16.76■□□□□ 0.27
TARBP1-201ENST00000040877 CCKP06307 115 aa16.76■□□□□ 0.27
TARBP1-201ENST00000040877 NUPR2A6NF83 97 aa16.75■□□□□ 0.27
TARBP1-201ENST00000040877 EDN2P20800 178 aa16.75■□□□□ 0.27
TARBP1-201ENST00000040877 CCDC179H3BU77 68 aa16.75■□□□□ 0.27
TARBP1-201ENST00000040877 IGKV2-28A0A075B6P5 120 aa16.74■□□□□ 0.27
TARBP1-201ENST00000040877 IGKV2D-28P01615 120 aa16.74■□□□□ 0.27
TARBP1-201ENST00000040877 Q6ZQY7 126 aa16.74■□□□□ 0.27
TARBP1-201ENST00000040877 LST1O00453 97 aa16.74■□□□□ 0.27
TARBP1-201ENST00000040877 LINC00242Q5T6M2 205 aa16.74■□□□□ 0.27
TARBP1-201ENST00000040877 C1orf158Q8N1D5 194 aa16.73■□□□□ 0.27
TARBP1-201ENST00000040877 LINC00526Q96FQ7 95 aa16.73■□□□□ 0.27
TARBP1-201ENST00000040877 CPAMD8Q8IZJ3 1885 aa16.72■□□□□ 0.27
TARBP1-201ENST00000040877 IMUPQ9GZP8 106 aa16.72■□□□□ 0.27
TARBP1-201ENST00000040877 EGFEM1PQ0D2K5 195 aa16.71■□□□□ 0.27
TARBP1-201ENST00000040877 CYSRT1A8MQ03 144 aa16.71■□□□□ 0.27
TARBP1-201ENST00000040877 CSDC2Q9Y534 153 aaKnown RBP16.71■□□□□ 0.27
TARBP1-201ENST00000040877 JMJD1CQ15652 2540 aa16.71■□□□□ 0.26
TARBP1-201ENST00000040877 ZNF73O43830 326 aaPredicted RBP16.71■□□□□ 0.26
TARBP1-201ENST00000040877 ENHOQ6UWT2 76 aa16.7■□□□□ 0.26
TARBP1-201ENST00000040877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.7■□□□□ 0.26
TARBP1-201ENST00000040877 BEAN1Q3B7T3 259 aa16.69■□□□□ 0.26
TARBP1-201ENST00000040877 MPLKIPQ8TAP9 179 aa16.69■□□□□ 0.26
TARBP1-201ENST00000040877 SMIM11BQ8TCY0 68 aa16.69■□□□□ 0.26
TARBP1-201ENST00000040877 SEC61GP60059 68 aa16.69■□□□□ 0.26
TARBP1-201ENST00000040877 M0R2N4 97 aa16.69■□□□□ 0.26
TARBP1-201ENST00000040877 ABCA12Q86UK0 2595 aa16.69■□□□□ 0.26
TARBP1-201ENST00000040877 LY6G6CO95867 125 aa16.68■□□□□ 0.26
TARBP1-201ENST00000040877 CEP295Q9C0D2 2601 aa16.68■□□□□ 0.26
TARBP1-201ENST00000040877 POM121L12Q8N7R1 296 aa16.68■□□□□ 0.26
TARBP1-201ENST00000040877 RAI1Q7Z5J4 1906 aaPredicted RBP16.68■□□□□ 0.26
TARBP1-201ENST00000040877 DOPEY1Q5JWR5 2465 aa16.67■□□□□ 0.26
TARBP1-201ENST00000040877 USP9XQ93008 2570 aaPredicted RBP16.67■□□□□ 0.26
TARBP1-201ENST00000040877 ANKRD11Q6UB99 2663 aaPredicted RBP16.66■□□□□ 0.26
TARBP1-201ENST00000040877 FHL2Q14192 279 aa16.66■□□□□ 0.26
TARBP1-201ENST00000040877 SRCAPQ6ZRS2 3230 aa16.66■□□□□ 0.26
TARBP1-201ENST00000040877 SERP2Q8N6R1 65 aa16.66■□□□□ 0.26
TARBP1-201ENST00000040877 SMIM1B2RUZ4 78 aa16.65■□□□□ 0.26
TARBP1-201ENST00000040877 USP17L23D6RBM5 183 aa16.65■□□□□ 0.26
TARBP1-201ENST00000040877 ZFYVE26Q68DK2 2539 aa16.65■□□□□ 0.26
TARBP1-201ENST00000040877 URB1-AS1Q96HZ7 61 aa16.64■□□□□ 0.25
TARBP1-201ENST00000040877 SVIPQ8NHG7 77 aa16.64■□□□□ 0.25
TARBP1-201ENST00000040877 EP400Q96L91 3159 aa16.63■□□□□ 0.25
TARBP1-201ENST00000040877 F8WDY8 70 aa16.63■□□□□ 0.25
TARBP1-201ENST00000040877 NDUFC2-KCTD14E9PQ53 114 aa16.63■□□□□ 0.25
TARBP1-201ENST00000040877 A0A0U1RQV1 116 aa16.62■□□□□ 0.25
TARBP1-201ENST00000040877 COX7CP15954 63 aa16.62■□□□□ 0.25
TARBP1-201ENST00000040877 SCXQ7RTU7 201 aa16.61■□□□□ 0.25
TARBP1-201ENST00000040877 CASC2Q6XLA1 102 aa16.61■□□□□ 0.25
TARBP1-201ENST00000040877 PLAC8L1A1L4L8 177 aa16.6■□□□□ 0.25
TARBP1-201ENST00000040877 AMELXQ99217 191 aa16.6■□□□□ 0.25
TARBP1-201ENST00000040877 TLN2Q9Y4G6 2542 aa16.6■□□□□ 0.25
TARBP1-201ENST00000040877 FAM240AA0A1B0GVK7 77 aa16.6■□□□□ 0.25
TARBP1-201ENST00000040877 UNQ6190/PRO20217Q6UXQ8 127 aa16.6■□□□□ 0.25
TARBP1-201ENST00000040877 RETNQ9HD89 108 aa16.59■□□□□ 0.25
TARBP1-201ENST00000040877 Q8N2B8 174 aa16.59■□□□□ 0.25
TARBP1-201ENST00000040877 SPTSSBQ8NFR3 76 aa16.59■□□□□ 0.25
TARBP1-201ENST00000040877 PPDPFQ9H3Y8 114 aa16.58■□□□□ 0.25
TARBP1-201ENST00000040877 Q6ZTC4 211 aa16.58■□□□□ 0.24
TARBP1-201ENST00000040877 A0A1B0GUV1 79 aa16.58■□□□□ 0.24
TARBP1-201ENST00000040877 RPL37AP8A6NKH3 93 aa16.58■□□□□ 0.24
TARBP1-201ENST00000040877 C3orf84H3BNL1 204 aa16.58■□□□□ 0.24
TARBP1-201ENST00000040877 ADAMTS20P59510 1910 aa16.57■□□□□ 0.24
TARBP1-201ENST00000040877 Q6Q795 121 aa16.57■□□□□ 0.24
TARBP1-201ENST00000040877 EML5Q05BV3 1969 aa16.57■□□□□ 0.24
TARBP1-201ENST00000040877 WDR87Q6ZQQ6 2873 aa16.55■□□□□ 0.24
TARBP1-201ENST00000040877 EXPH5Q8NEV8 1989 aa16.55■□□□□ 0.24
TARBP1-201ENST00000040877 IGLV4-60A0A075B6I1 120 aa16.55■□□□□ 0.24
TARBP1-201ENST00000040877 WFDC10BQ8IUB3 73 aa16.53■□□□□ 0.24
TARBP1-201ENST00000040877 LINC01561Q8N1V8 128 aa16.53■□□□□ 0.24
TARBP1-201ENST00000040877 LINC00694P0DN24 101 aa16.53■□□□□ 0.24
TARBP1-201ENST00000040877 RPL28P46779 137 aaKnown RBP16.53■□□□□ 0.24
TARBP1-201ENST00000040877 M0QXV9 152 aa16.52■□□□□ 0.24
TARBP1-201ENST00000040877 V9GYY9 64 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms