RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PRB1P04280 392 aa9.98□□□□□ -0.81
USH1C-201ENST00000005226 BAALC-AS2P0C853 105 aa9.98□□□□□ -0.81
USH1C-201ENST00000005226 C4orf3Q8WVX3 66 aa9.98□□□□□ -0.81
USH1C-201ENST00000005226 TOMM7Q9P0U1 55 aa9.98□□□□□ -0.81
USH1C-201ENST00000005226 K7EQD1 137 aa9.97□□□□□ -0.81
USH1C-201ENST00000005226 NBPF19A0A087WUL8 3843 aa9.97□□□□□ -0.81
USH1C-201ENST00000005226 WFDC10AQ9H1F0 79 aa9.97□□□□□ -0.81
USH1C-201ENST00000005226 CR1P17927 2039 aa9.96□□□□□ -0.81
USH1C-201ENST00000005226 C22orf24Q9Y442 160 aa9.96□□□□□ -0.81
USH1C-201ENST00000005226 FAM240AA0A1B0GVK7 77 aa9.95□□□□□ -0.82
USH1C-201ENST00000005226 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
USH1C-201ENST00000005226 FAM236AA0A1B0GUQ0 79 aa9.93□□□□□ -0.82
USH1C-201ENST00000005226 FAM236BA0A1B0GV22 79 aa9.93□□□□□ -0.82
USH1C-201ENST00000005226 UBE2L6O14933 153 aa9.93□□□□□ -0.82
USH1C-201ENST00000005226 MIR7-3HGQ8N6C7 128 aa9.93□□□□□ -0.82
USH1C-201ENST00000005226 IL17DQ8TAD2 202 aa9.93□□□□□ -0.82
USH1C-201ENST00000005226 MRPL23Q16540 153 aaKnown RBP9.92□□□□□ -0.82
USH1C-201ENST00000005226 LINC00337Q8N6G1 96 aa9.92□□□□□ -0.82
USH1C-201ENST00000005226 RPL35AP18077 110 aaKnown RBP9.92□□□□□ -0.82
USH1C-201ENST00000005226 TRGV2A0A075B6R0 118 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 C9orf129Q5T035 196 aaKnown RBP9.91□□□□□ -0.82
USH1C-201ENST00000005226 SMIM20Q8N5G0 67 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 TMEM243Q9BU79 118 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 IGLV4-60A0A075B6I1 120 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 TRBV7-7A0A0K0K1E9 115 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 CSDC2Q9Y534 153 aaKnown RBP9.91□□□□□ -0.82
USH1C-201ENST00000005226 IGKV2-28A0A075B6P5 120 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 IGKV2D-28P01615 120 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 LINC00158P58513 81 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 GAGE2AQ6NT46 116 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 FAM19A3Q7Z5A8 133 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 SVIPQ8NHG7 77 aa9.91□□□□□ -0.82
USH1C-201ENST00000005226 ITPR3Q14573 2671 aa9.9□□□□□ -0.82
USH1C-201ENST00000005226 TRBV10-1A0A0K0K1A3 114 aa9.9□□□□□ -0.82
USH1C-201ENST00000005226 ATP5G1P05496 136 aa9.9□□□□□ -0.82
USH1C-201ENST00000005226 GIG44P09565 113 aaPredicted RBP9.9□□□□□ -0.82
USH1C-201ENST00000005226 C11orf68Q9H3H3 251 aaKnown RBP9.9□□□□□ -0.82
USH1C-201ENST00000005226 PFN2P35080 140 aa9.9□□□□□ -0.83
USH1C-201ENST00000005226 COX7B2Q8TF08 81 aa9.9□□□□□ -0.83
USH1C-201ENST00000005226 SND1-IT1Q9HBX3 110 aa9.9□□□□□ -0.83
USH1C-201ENST00000005226 NBEAL2Q6ZNJ1 2754 aa9.9□□□□□ -0.83
USH1C-201ENST00000005226 A0A087WYN8 130 aa9.89□□□□□ -0.83
USH1C-201ENST00000005226 TRACP01848 142 aa9.89□□□□□ -0.83
USH1C-201ENST00000005226 HIST2H2BCQ6DN03 193 aa9.89□□□□□ -0.83
USH1C-201ENST00000005226 C5orf38Q86SI9 138 aa9.89□□□□□ -0.83
USH1C-201ENST00000005226 MTORP42345 2549 aa9.89□□□□□ -0.83
USH1C-201ENST00000005226 ACANP16112 2415 aa9.89□□□□□ -0.83
USH1C-201ENST00000005226 HERV-K104P63124 156 aa9.89□□□□□ -0.83
USH1C-201ENST00000005226 APCP25054 2843 aa9.88□□□□□ -0.83
USH1C-201ENST00000005226 CCL24O00175 119 aa9.88□□□□□ -0.83
USH1C-201ENST00000005226 CRPP02741 224 aa9.88□□□□□ -0.83
USH1C-201ENST00000005226 SMIM11BQ8TCY0 68 aa9.88□□□□□ -0.83
USH1C-201ENST00000005226 COPS9Q8WXC6 57 aa9.88□□□□□ -0.83
USH1C-201ENST00000005226 PLAC8L1A1L4L8 177 aa9.87□□□□□ -0.83
USH1C-201ENST00000005226 MALP21145 153 aa9.87□□□□□ -0.83
USH1C-201ENST00000005226 FLNAP21333 2647 aaKnown RBP9.87□□□□□ -0.83
USH1C-201ENST00000005226 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
USH1C-201ENST00000005226 CCL18P55774 89 aa9.86□□□□□ -0.83
USH1C-201ENST00000005226 SLPIP03973 132 aa9.86□□□□□ -0.83
USH1C-201ENST00000005226 ACYP1P07311 99 aa9.86□□□□□ -0.83
USH1C-201ENST00000005226 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
USH1C-201ENST00000005226 LINC00643Q86TS7 51 aa9.85□□□□□ -0.83
USH1C-201ENST00000005226 TRAV13-2A0A0B4J235 113 aa9.85□□□□□ -0.83
USH1C-201ENST00000005226 GCN1Q92616 2671 aaKnown RBP9.85□□□□□ -0.83
USH1C-201ENST00000005226 C14orf132Q9NPU4 83 aa9.84□□□□□ -0.83
USH1C-201ENST00000005226 OR13C6PQ8NH95 151 aa9.84□□□□□ -0.83
USH1C-201ENST00000005226 ESM1Q9NQ30 184 aa9.84□□□□□ -0.84
USH1C-201ENST00000005226 USP24Q9UPU5 2620 aa9.83□□□□□ -0.84
USH1C-201ENST00000005226 DNAJC9-AS1A6NH13 148 aa9.83□□□□□ -0.84
USH1C-201ENST00000005226 PAX4O43316 350 aa9.83□□□□□ -0.84
USH1C-201ENST00000005226 DEFB113Q30KQ7 82 aa9.83□□□□□ -0.84
USH1C-201ENST00000005226 TRAV25A0A0B4J276 109 aa9.82□□□□□ -0.84
USH1C-201ENST00000005226 IGHV3OR16-9A0A0B4J2B5 98 aa9.82□□□□□ -0.84
USH1C-201ENST00000005226 LECT2O14960 151 aa9.82□□□□□ -0.84
USH1C-201ENST00000005226 CLPSL2Q6UWE3 100 aa9.82□□□□□ -0.84
USH1C-201ENST00000005226 DNAL4O96015 105 aa9.82□□□□□ -0.84
USH1C-201ENST00000005226 DEFB130BP0DP73 79 aa9.81□□□□□ -0.84
USH1C-201ENST00000005226 DEFB130AP0DP74 79 aa9.81□□□□□ -0.84
USH1C-201ENST00000005226 SDIM1Q6ZPB5 146 aa9.81□□□□□ -0.84
USH1C-201ENST00000005226 BBC3Q96PG8 261 aaPredicted RBP9.81□□□□□ -0.84
USH1C-201ENST00000005226 UBR5O95071 2799 aaPredicted RBP9.81□□□□□ -0.84
USH1C-201ENST00000005226 TRBV6-8A0A0A6YYG3 113 aa9.81□□□□□ -0.84
USH1C-201ENST00000005226 NCR3O14931 201 aa9.81□□□□□ -0.84
USH1C-201ENST00000005226 PRR3P79522 188 aaKnown RBP9.81□□□□□ -0.84
USH1C-201ENST00000005226 FHL2Q14192 279 aa9.81□□□□□ -0.84
USH1C-201ENST00000005226 A0A096LPF7 62 aa9.8□□□□□ -0.84
USH1C-201ENST00000005226 IGKV3D-7A0A0C4DH55 119 aa9.8□□□□□ -0.84
USH1C-201ENST00000005226 XCL1P47992 114 aa9.8□□□□□ -0.84
USH1C-201ENST00000005226 C16orf74Q96GX8 76 aa9.8□□□□□ -0.84
USH1C-201ENST00000005226 IMUPQ9GZP8 106 aa9.8□□□□□ -0.84
USH1C-201ENST00000005226 TRBV6-4A0A1B0GX49 114 aa9.79□□□□□ -0.84
USH1C-201ENST00000005226 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
USH1C-201ENST00000005226 KLK5Q9Y337 293 aaPredicted RBP9.79□□□□□ -0.84
USH1C-201ENST00000005226 PF4P02776 101 aa9.79□□□□□ -0.84
USH1C-201ENST00000005226 INAFM2P0DMQ5 153 aa9.79□□□□□ -0.84
USH1C-201ENST00000005226 C9orf153Q5TBE3 101 aa9.79□□□□□ -0.84
USH1C-201ENST00000005226 C6orf226Q5I0X4 101 aa9.78□□□□□ -0.84
USH1C-201ENST00000005226 WFDC11Q8NEX6 87 aa9.78□□□□□ -0.84
USH1C-201ENST00000005226 KRTAP1-3Q8IUG1 177 aa9.78□□□□□ -0.84
USH1C-201ENST00000005226 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms