RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 UBE2L6O14933 153 aa12.17□□□□□ -0.46
PHGDH-208ENST00000641023 DAD1P61803 113 aa12.17□□□□□ -0.46
PHGDH-208ENST00000641023 RNASE13Q5GAN3 156 aaKnown RBP12.17□□□□□ -0.46
PHGDH-208ENST00000641023 Q6ZUT4 128 aa12.17□□□□□ -0.46
PHGDH-208ENST00000641023 HSD52Q0P140 79 aa12.17□□□□□ -0.46
PHGDH-208ENST00000641023 MAPKAPK5-AS1Q8N8E1 139 aa12.17□□□□□ -0.46
PHGDH-208ENST00000641023 TMEM243Q9BU79 118 aa12.17□□□□□ -0.46
PHGDH-208ENST00000641023 MYMXA0A1B0GTQ4 84 aa12.16□□□□□ -0.46
PHGDH-208ENST00000641023 H7C423 109 aa12.16□□□□□ -0.46
PHGDH-208ENST00000641023 SPART-AS1P0CW21 52 aa12.16□□□□□ -0.46
PHGDH-208ENST00000641023 LINC00694P0DN24 101 aa12.16□□□□□ -0.46
PHGDH-208ENST00000641023 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
PHGDH-208ENST00000641023 COL6A5A8TX70 2615 aa12.16□□□□□ -0.46
PHGDH-208ENST00000641023 GYPEP15421 78 aa12.15□□□□□ -0.46
PHGDH-208ENST00000641023 ZNF22P17026 224 aaPredicted RBP12.15□□□□□ -0.46
PHGDH-208ENST00000641023 TRBV6-8A0A0A6YYG3 113 aa12.14□□□□□ -0.47
PHGDH-208ENST00000641023 G3V4G9 280 aa12.14□□□□□ -0.47
PHGDH-208ENST00000641023 AMMECR1LQ6DCA0 310 aa12.14□□□□□ -0.47
PHGDH-208ENST00000641023 TINCRA0A1B0GVN0 87 aa12.14□□□□□ -0.47
PHGDH-208ENST00000641023 TMEM223A0PJW6 202 aa12.14□□□□□ -0.47
PHGDH-208ENST00000641023 ATP5G1P05496 136 aa12.14□□□□□ -0.47
PHGDH-208ENST00000641023 PAX4O43316 350 aa12.13□□□□□ -0.47
PHGDH-208ENST00000641023 OR5A1Q8NGJ0 315 aa12.13□□□□□ -0.47
PHGDH-208ENST00000641023 ATP6V0E2Q8NHE4 81 aa12.13□□□□□ -0.47
PHGDH-208ENST00000641023 TMEM101Q96IK0 257 aa12.13□□□□□ -0.47
PHGDH-208ENST00000641023 TEX48A0A1B0GUV7 120 aa12.12□□□□□ -0.47
PHGDH-208ENST00000641023 ZNF815PA8K554 130 aa12.12□□□□□ -0.47
PHGDH-208ENST00000641023 CELA1Q9UNI1 258 aa12.12□□□□□ -0.47
PHGDH-208ENST00000641023 UBE2D1P51668 147 aa12.12□□□□□ -0.47
PHGDH-208ENST00000641023 SEC11AP67812 179 aa12.12□□□□□ -0.47
PHGDH-208ENST00000641023 ZNF25P17030 456 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-208ENST00000641023 ORAOV1Q8WV07 137 aa12.11□□□□□ -0.47
PHGDH-208ENST00000641023 GEMIN7Q9H840 131 aaKnown RBP12.11□□□□□ -0.47
PHGDH-208ENST00000641023 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
PHGDH-208ENST00000641023 PKD1L1Q8TDX9 2849 aa12.11□□□□□ -0.47
PHGDH-208ENST00000641023 J3QQQ9 107 aa12.1□□□□□ -0.47
PHGDH-208ENST00000641023 LEPROTO15243 131 aa12.1□□□□□ -0.47
PHGDH-208ENST00000641023 LGALS3P17931 250 aaKnown RBP12.1□□□□□ -0.47
PHGDH-208ENST00000641023 SAMD5Q5TGI4 173 aa12.1□□□□□ -0.47
PHGDH-208ENST00000641023 SCGB1D4Q6XE38 83 aa12.1□□□□□ -0.47
PHGDH-208ENST00000641023 CHCHD5Q9BSY4 110 aa12.09□□□□□ -0.47
PHGDH-208ENST00000641023 TIRAPP58753 221 aa12.09□□□□□ -0.47
PHGDH-208ENST00000641023 TAL2Q16559 108 aa12.09□□□□□ -0.47
PHGDH-208ENST00000641023 A6NDN8 102 aa12.08□□□□□ -0.48
PHGDH-208ENST00000641023 GAGE6Q13070 117 aa12.08□□□□□ -0.48
PHGDH-208ENST00000641023 PLEKHB2Q96CS7 222 aa12.08□□□□□ -0.48
PHGDH-208ENST00000641023 VSIG2Q96IQ7 327 aa12.08□□□□□ -0.48
PHGDH-208ENST00000641023 CMYA5Q8N3K9 4069 aa12.08□□□□□ -0.48
PHGDH-208ENST00000641023 A0A0J9YY99 117 aa12.07□□□□□ -0.48
PHGDH-208ENST00000641023 F5H768 121 aa12.07□□□□□ -0.48
PHGDH-208ENST00000641023 HERVK_113P63121 156 aa12.07□□□□□ -0.48
PHGDH-208ENST00000641023 IGHV3-64A0A075B6Q5 118 aa12.07□□□□□ -0.48
PHGDH-208ENST00000641023 GCSHP23434 173 aa12.07□□□□□ -0.48
PHGDH-208ENST00000641023 TSPEAR-AS2P59090 65 aa12.07□□□□□ -0.48
PHGDH-208ENST00000641023 FAM19A3Q7Z5A8 133 aa12.07□□□□□ -0.48
PHGDH-208ENST00000641023 H3BRM9 83 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 HIST1H4GQ99525 98 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 TRAV26-1A0A087WT03 109 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 TRAV13-1A0A0B4J241 112 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 IGHV1-58A0A0C4DH39 117 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 CEND1Q8N111 149 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 TM2D2Q9BX73 214 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 RETNQ9HD89 108 aa12.06□□□□□ -0.48
PHGDH-208ENST00000641023 IGLV5-45A0A087WSX0 123 aa12.05□□□□□ -0.48
PHGDH-208ENST00000641023 ANK2Q01484 3957 aa12.05□□□□□ -0.48
PHGDH-208ENST00000641023 A0A096LPF7 62 aa12.04□□□□□ -0.48
PHGDH-208ENST00000641023 IGHV3-30-3P0DP02 117 aa12.04□□□□□ -0.48
PHGDH-208ENST00000641023 HTN3P15516 51 aa12.04□□□□□ -0.48
PHGDH-208ENST00000641023 CDKN2A-AS1Q9UH64 79 aa12.04□□□□□ -0.48
PHGDH-208ENST00000641023 PTTG1IPP53801 180 aa12.04□□□□□ -0.48
PHGDH-208ENST00000641023 TRAV8-3A0A0A6YYJ7 113 aa12.03□□□□□ -0.48
PHGDH-208ENST00000641023 COX11Q9Y6N1 276 aa12.03□□□□□ -0.48
PHGDH-208ENST00000641023 TAX1BP3O14907 124 aa12.02□□□□□ -0.48
PHGDH-208ENST00000641023 MRPL23Q16540 153 aaKnown RBP12.02□□□□□ -0.48
PHGDH-208ENST00000641023 TMEM262E9PQX1 116 aa12.02□□□□□ -0.49
PHGDH-208ENST00000641023 SPINK8P0C7L1 97 aa12.02□□□□□ -0.49
PHGDH-208ENST00000641023 FXYD2P54710 66 aa12.02□□□□□ -0.49
PHGDH-208ENST00000641023 COX6A2Q02221 97 aa12.02□□□□□ -0.49
PHGDH-208ENST00000641023 SRSF9Q13242 221 aaKnown RBP eCLIP12.02□□□□□ -0.49
PHGDH-208ENST00000641023 C12orf74Q32Q52 190 aa12.02□□□□□ -0.49
PHGDH-208ENST00000641023 C11orf68Q9H3H3 251 aaKnown RBP12.02□□□□□ -0.49
PHGDH-208ENST00000641023 IGLV4-60A0A075B6I1 120 aa12.01□□□□□ -0.49
PHGDH-208ENST00000641023 SH2D6Q7Z4S9 175 aa12.01□□□□□ -0.49
PHGDH-208ENST00000641023 Q6ZVH6 145 aa12.01□□□□□ -0.49
PHGDH-208ENST00000641023 A0A1B0GUV1 79 aa12□□□□□ -0.49
PHGDH-208ENST00000641023 ICOSQ9Y6W8 199 aa12□□□□□ -0.49
PHGDH-208ENST00000641023 K7EP13 123 aa11.98□□□□□ -0.49
PHGDH-208ENST00000641023 SMIM13P0DJ93 91 aa11.98□□□□□ -0.49
PHGDH-208ENST00000641023 SPANXB1Q9NS25 103 aaPredicted RBP11.98□□□□□ -0.49
PHGDH-208ENST00000641023 IGKV3OR2-268A0A0C4DH90 116 aa11.97□□□□□ -0.49
PHGDH-208ENST00000641023 RBX1P62877 108 aa11.97□□□□□ -0.49
PHGDH-208ENST00000641023 NDUFA12Q9UI09 145 aa11.97□□□□□ -0.49
PHGDH-208ENST00000641023 DNAH3Q8TD57 4116 aa11.97□□□□□ -0.49
PHGDH-208ENST00000641023 ZFAND6Q6FIF0 208 aa11.96□□□□□ -0.49
PHGDH-208ENST00000641023 NHP2Q9NX24 153 aaKnown RBP11.96□□□□□ -0.49
PHGDH-208ENST00000641023 NOTCH1P46531 2555 aa11.96□□□□□ -0.49
PHGDH-208ENST00000641023 PRB2P02812 416 aaPredicted RBP11.96□□□□□ -0.5
PHGDH-208ENST00000641023 C10orf126Q8N4M7 172 aa11.96□□□□□ -0.5
PHGDH-208ENST00000641023 MDFIQ99750 246 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms