RNA–Protein interactions for RNA: ENST00000639561.1

ATRIP-208, Transcript of ATR interacting protein, humanhuman

TSL 2

Gene ATRIP, Length 2,376 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-208ENST00000639561 TRAV4A0A0B4J268 109 aa9.86□□□□□ -0.83
ATRIP-208ENST00000639561 IGKV2-29A2NJV5 120 aaPredicted RBP9.86□□□□□ -0.83
ATRIP-208ENST00000639561 CEND1Q8N111 149 aa9.86□□□□□ -0.83
ATRIP-208ENST00000639561 ZNF815PA8K554 130 aa9.85□□□□□ -0.83
ATRIP-208ENST00000639561 H3BRM9 83 aa9.85□□□□□ -0.83
ATRIP-208ENST00000639561 RNASE13Q5GAN3 156 aaKnown RBP9.85□□□□□ -0.83
ATRIP-208ENST00000639561 AMELXQ99217 191 aa9.85□□□□□ -0.83
ATRIP-208ENST00000639561 UBE2D4Q9Y2X8 147 aa9.85□□□□□ -0.83
ATRIP-208ENST00000639561 A0A0J9YXV3 536 aa9.85□□□□□ -0.83
ATRIP-208ENST00000639561 HERVK_113P61574 105 aa9.85□□□□□ -0.83
ATRIP-208ENST00000639561 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
ATRIP-208ENST00000639561 K7EQD1 137 aa9.84□□□□□ -0.83
ATRIP-208ENST00000639561 SLC25A29Q8N8R3 303 aa9.84□□□□□ -0.83
ATRIP-208ENST00000639561 PLEKHB2Q96CS7 222 aa9.84□□□□□ -0.83
ATRIP-208ENST00000639561 NAA38Q9BRA0 125 aaKnown RBP9.84□□□□□ -0.83
ATRIP-208ENST00000639561 K7ERJ3 54 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 ZNF22P17026 224 aaPredicted RBP9.83□□□□□ -0.84
ATRIP-208ENST00000639561 RRN3P1Q2M238 152 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 RAB37Q96AX2 223 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 COL7A1Q02388 2944 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE7O76087 117 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE12FP0CL80 117 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE12GP0CL81 117 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE12IP0CL82 117 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 TAL2Q16559 108 aa9.83□□□□□ -0.84
ATRIP-208ENST00000639561 TMEM223A0PJW6 202 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 C9orf118A6NHY6 69 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 HIST1H4GQ99525 98 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 TRBV10-1A0A0K0K1A3 114 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE10A6NGK3 116 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 Q6ZUT4 128 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 OVOL2Q9BRP0 275 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 SPANXA1Q9NS26 97 aa9.82□□□□□ -0.84
ATRIP-208ENST00000639561 H3BUT2 72 aa9.81□□□□□ -0.84
ATRIP-208ENST00000639561 CRYBA4P53673 196 aa9.81□□□□□ -0.84
ATRIP-208ENST00000639561 NHP2Q9NX24 153 aaKnown RBP9.81□□□□□ -0.84
ATRIP-208ENST00000639561 TRGV2A0A075B6R0 118 aa9.81□□□□□ -0.84
ATRIP-208ENST00000639561 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
ATRIP-208ENST00000639561 SCGB1D4Q6XE38 83 aa9.81□□□□□ -0.84
ATRIP-208ENST00000639561 J3QQQ9 107 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 RPL36AP83881 106 aaKnown RBP9.8□□□□□ -0.84
ATRIP-208ENST00000639561 RPL36ALQ969Q0 106 aaKnown RBP9.8□□□□□ -0.84
ATRIP-208ENST00000639561 IGHV3-64A0A075B6Q5 118 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE12JA6NER3 117 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 SMIM13P0DJ93 91 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 UBE2D3P61077 147 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 UBE2D2P62837 147 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE4Q13068 117 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE5Q13069 117 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 GAGE13Q4V321 117 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 NTM-AS1Q6ZSK4 140 aa9.8□□□□□ -0.84
ATRIP-208ENST00000639561 A8MZ25 164 aa9.79□□□□□ -0.84
ATRIP-208ENST00000639561 LINC00694P0DN24 101 aa9.79□□□□□ -0.84
ATRIP-208ENST00000639561 A0A0J9YY99 117 aa9.79□□□□□ -0.84
ATRIP-208ENST00000639561 SBSPONQ8IVN8 264 aa9.79□□□□□ -0.84
ATRIP-208ENST00000639561 LOC100131303A0A0U1RQF7 123 aa9.78□□□□□ -0.84
ATRIP-208ENST00000639561 GTF2H5Q6ZYL4 71 aa9.78□□□□□ -0.84
ATRIP-208ENST00000639561 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
ATRIP-208ENST00000639561 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
ATRIP-208ENST00000639561 LEPROTO15243 131 aa9.78□□□□□ -0.84
ATRIP-208ENST00000639561 IGHV4-30-4P0DP06 118 aa9.78□□□□□ -0.84
ATRIP-208ENST00000639561 LGALS3P17931 250 aaKnown RBP9.77□□□□□ -0.85
ATRIP-208ENST00000639561 A0A1W2PPM0 123 aa9.77□□□□□ -0.85
ATRIP-208ENST00000639561 C12orf74Q32Q52 190 aa9.77□□□□□ -0.85
ATRIP-208ENST00000639561 X6R8D5 127 aa9.77□□□□□ -0.85
ATRIP-208ENST00000639561 TRBV6-4A0A1B0GX49 114 aa9.76□□□□□ -0.85
ATRIP-208ENST00000639561 OR5A1Q8NGJ0 315 aa9.76□□□□□ -0.85
ATRIP-208ENST00000639561 TIMM21Q9BVV7 248 aa9.76□□□□□ -0.85
ATRIP-208ENST00000639561 TRAV8-3A0A0A6YYJ7 113 aa9.75□□□□□ -0.85
ATRIP-208ENST00000639561 TINCRA0A1B0GVN0 87 aa9.75□□□□□ -0.85
ATRIP-208ENST00000639561 C3orf84H3BNL1 204 aa9.75□□□□□ -0.85
ATRIP-208ENST00000639561 UBE2D1P51668 147 aa9.75□□□□□ -0.85
ATRIP-208ENST00000639561 FHL2Q14192 279 aa9.75□□□□□ -0.85
ATRIP-208ENST00000639561 TRGV4A0A0C4DH28 118 aa9.75□□□□□ -0.85
ATRIP-208ENST00000639561 K7EP34 96 aa9.75□□□□□ -0.85
ATRIP-208ENST00000639561 SRSF9Q13242 221 aaKnown RBP eCLIP9.75□□□□□ -0.85
ATRIP-208ENST00000639561 A0A1B0GWB2 263 aa9.74□□□□□ -0.85
ATRIP-208ENST00000639561 IGHV3-30-3P0DP02 117 aa9.74□□□□□ -0.85
ATRIP-208ENST00000639561 TM2D3Q9BRN9 247 aa9.74□□□□□ -0.85
ATRIP-208ENST00000639561 DEFB130BP0DP73 79 aa9.74□□□□□ -0.85
ATRIP-208ENST00000639561 DEFB130AP0DP74 79 aa9.74□□□□□ -0.85
ATRIP-208ENST00000639561 DGAT2L7PQ6IED9 249 aa9.74□□□□□ -0.85
ATRIP-208ENST00000639561 C10orf126Q8N4M7 172 aa9.73□□□□□ -0.85
ATRIP-208ENST00000639561 SCGB1A1P11684 91 aa9.73□□□□□ -0.85
ATRIP-208ENST00000639561 LINC00612Q8N6U2 182 aa9.73□□□□□ -0.85
ATRIP-208ENST00000639561 KIR2DL5BQ8NHK3 375 aa9.73□□□□□ -0.85
ATRIP-208ENST00000639561 SPATA25Q9BR10 227 aa9.73□□□□□ -0.85
ATRIP-208ENST00000639561 SPANXB1Q9NS25 103 aaPredicted RBP9.73□□□□□ -0.85
ATRIP-208ENST00000639561 IGHV1-58A0A0C4DH39 117 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 IGLL5B9A064 214 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 IGHV3-30P01768 117 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 SPINK8P0C7L1 97 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 IGHV3-30-5P0DP03 117 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 GTSF1LQ9H1H1 148 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 CSDC2Q9Y534 153 aaKnown RBP9.72□□□□□ -0.85
ATRIP-208ENST00000639561 A0A1B0GV72 72 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 MUC7Q8TAX7 377 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 SPCS1Q9Y6A9 102 aa9.72□□□□□ -0.85
ATRIP-208ENST00000639561 HUWE1Q7Z6Z7 4374 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms