RNA–Protein interactions for RNA: ENST00000638820.1

SCN8A-215, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5 BASIC

Gene SCN8A, Length 3,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-215ENST00000638820 TMEM97Q5BJF2 176 aa9.38□□□□□ -0.91
SCN8A-215ENST00000638820 Q6ZUT4 128 aa9.38□□□□□ -0.91
SCN8A-215ENST00000638820 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
SCN8A-215ENST00000638820 TRAV12-1A0A0B4J245 112 aa9.38□□□□□ -0.91
SCN8A-215ENST00000638820 A0A0J9YXV3 536 aa9.38□□□□□ -0.91
SCN8A-215ENST00000638820 LURAP1LQ8IV03 231 aa9.37□□□□□ -0.91
SCN8A-215ENST00000638820 LINC00469Q8N7U9 141 aa9.37□□□□□ -0.91
SCN8A-215ENST00000638820 CHCHD7Q9BUK0 85 aa9.37□□□□□ -0.91
SCN8A-215ENST00000638820 NANOS2P60321 138 aaKnown RBP9.37□□□□□ -0.91
SCN8A-215ENST00000638820 Q6ZTC4 211 aa9.37□□□□□ -0.91
SCN8A-215ENST00000638820 SCGB1D4Q6XE38 83 aa9.37□□□□□ -0.91
SCN8A-215ENST00000638820 ICOSQ9Y6W8 199 aa9.37□□□□□ -0.91
SCN8A-215ENST00000638820 TENM3Q9P273 2699 aa9.37□□□□□ -0.91
SCN8A-215ENST00000638820 TRBV6-8A0A0A6YYG3 113 aa9.36□□□□□ -0.91
SCN8A-215ENST00000638820 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
SCN8A-215ENST00000638820 A8MZ25 164 aa9.36□□□□□ -0.91
SCN8A-215ENST00000638820 LINC00694P0DN24 101 aa9.36□□□□□ -0.91
SCN8A-215ENST00000638820 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
SCN8A-215ENST00000638820 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
SCN8A-215ENST00000638820 TTTY13Q9BZ97 58 aa9.35□□□□□ -0.91
SCN8A-215ENST00000638820 NTM-AS1Q6ZSK4 140 aa9.35□□□□□ -0.91
SCN8A-215ENST00000638820 UBE2D4Q9Y2X8 147 aa9.35□□□□□ -0.91
SCN8A-215ENST00000638820 CLPSL2Q6UWE3 100 aa9.35□□□□□ -0.91
SCN8A-215ENST00000638820 PCP2Q8IVA1 136 aa9.35□□□□□ -0.91
SCN8A-215ENST00000638820 DEFB131BA0A096LNP1 70 aa9.34□□□□□ -0.91
SCN8A-215ENST00000638820 C12orf74Q32Q52 190 aa9.34□□□□□ -0.91
SCN8A-215ENST00000638820 HINT1P49773 126 aaPredicted RBP9.34□□□□□ -0.91
SCN8A-215ENST00000638820 LINC00612Q8N6U2 182 aa9.34□□□□□ -0.91
SCN8A-215ENST00000638820 GTSF1LQ9H1H1 148 aa9.33□□□□□ -0.92
SCN8A-215ENST00000638820 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
SCN8A-215ENST00000638820 LGALS3P17931 250 aaKnown RBP9.33□□□□□ -0.92
SCN8A-215ENST00000638820 PYGO1Q9Y3Y4 419 aa9.33□□□□□ -0.92
SCN8A-215ENST00000638820 M0R143 59 aa9.32□□□□□ -0.92
SCN8A-215ENST00000638820 COX8AP10176 69 aa9.32□□□□□ -0.92
SCN8A-215ENST00000638820 ANGP03950 147 aaKnown RBP9.31□□□□□ -0.92
SCN8A-215ENST00000638820 KPRPQ5T749 579 aaPredicted RBP9.31□□□□□ -0.92
SCN8A-215ENST00000638820 IGKV2D-26A0A0A0MRZ7 120 aa9.31□□□□□ -0.92
SCN8A-215ENST00000638820 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
SCN8A-215ENST00000638820 H3BRM9 83 aa9.3□□□□□ -0.92
SCN8A-215ENST00000638820 SEC11AP67812 179 aa9.3□□□□□ -0.92
SCN8A-215ENST00000638820 TOMM7Q9P0U1 55 aa9.3□□□□□ -0.92
SCN8A-215ENST00000638820 SH2D6Q7Z4S9 175 aa9.29□□□□□ -0.92
SCN8A-215ENST00000638820 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
SCN8A-215ENST00000638820 SPINK8P0C7L1 97 aa9.29□□□□□ -0.92
SCN8A-215ENST00000638820 SRSF9Q13242 221 aaKnown RBP eCLIP9.29□□□□□ -0.92
SCN8A-215ENST00000638820 PTTG1IPP53801 180 aa9.28□□□□□ -0.92
SCN8A-215ENST00000638820 IGLV4-69A0A075B6H9 119 aa9.28□□□□□ -0.92
SCN8A-215ENST00000638820 C11orf68Q9H3H3 251 aaKnown RBP9.28□□□□□ -0.92
SCN8A-215ENST00000638820 ZNF25P17030 456 aaPredicted RBP9.27□□□□□ -0.92
SCN8A-215ENST00000638820 MPV17L2Q567V2 206 aa9.27□□□□□ -0.92
SCN8A-215ENST00000638820 IGLV4-60A0A075B6I1 120 aa9.27□□□□□ -0.93
SCN8A-215ENST00000638820 IGLL5B9A064 214 aa9.27□□□□□ -0.93
SCN8A-215ENST00000638820 RBX1P62877 108 aa9.27□□□□□ -0.93
SCN8A-215ENST00000638820 CDC42SE2Q9NRR3 84 aa9.27□□□□□ -0.93
SCN8A-215ENST00000638820 GCSHP23434 173 aa9.27□□□□□ -0.93
SCN8A-215ENST00000638820 IGLV10-54A0A075B6I4 117 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 ZNF22P17026 224 aaPredicted RBP9.26□□□□□ -0.93
SCN8A-215ENST00000638820 XCL1P47992 114 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 HERVK_113P63121 156 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 HIST1H4GQ99525 98 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 J3QQQ9 107 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 IGHV3-30P01768 117 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 IGHV3-33P01772 117 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 IGHV3-30-3P0DP02 117 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 IGHV3-30-5P0DP03 117 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 AMELXQ99217 191 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 CDKN2A-AS1Q9UH64 79 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 E9PLD3 99 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 MRPS36P82909 103 aaKnown RBP9.26□□□□□ -0.93
SCN8A-215ENST00000638820 SS18Q15532 418 aa9.26□□□□□ -0.93
SCN8A-215ENST00000638820 MRPL52Q86TS9 123 aaKnown RBP9.26□□□□□ -0.93
SCN8A-215ENST00000638820 TRAV10A0A0B4J240 114 aa9.25□□□□□ -0.93
SCN8A-215ENST00000638820 H7C423 109 aa9.25□□□□□ -0.93
SCN8A-215ENST00000638820 CRPP02741 224 aa9.25□□□□□ -0.93
SCN8A-215ENST00000638820 C5orf38Q86SI9 138 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 LINC00269Q8N2A0 174 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 PLEKHB2Q96CS7 222 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 TM2D3Q9BRN9 247 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 KLK12Q9UKR0 248 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 EREGO14944 169 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 MRPS16Q9Y3D3 137 aaKnown RBP9.24□□□□□ -0.93
SCN8A-215ENST00000638820 MYMXA0A1B0GTQ4 84 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 UBE2D1P51668 147 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 NFE4Q86UQ8 179 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 SNHG12Q9BXW3 62 aa9.24□□□□□ -0.93
SCN8A-215ENST00000638820 TINCRA0A1B0GVN0 87 aa9.23□□□□□ -0.93
SCN8A-215ENST00000638820 PRSS2P07478 247 aa9.23□□□□□ -0.93
SCN8A-215ENST00000638820 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
SCN8A-215ENST00000638820 A0A0U1RRA0 63 aa9.23□□□□□ -0.93
SCN8A-215ENST00000638820 LELP1Q5T871 98 aa9.23□□□□□ -0.93
SCN8A-215ENST00000638820 UBE2WQ96B02 151 aa9.23□□□□□ -0.93
SCN8A-215ENST00000638820 ZNF625Q96I27 306 aaPredicted RBP9.23□□□□□ -0.93
SCN8A-215ENST00000638820 NPSP0C0P6 89 aa9.23□□□□□ -0.93
SCN8A-215ENST00000638820 MAPKAPK5-AS1Q8N8E1 139 aa9.23□□□□□ -0.93
SCN8A-215ENST00000638820 LINC00242Q5T6M2 205 aa9.22□□□□□ -0.93
SCN8A-215ENST00000638820 MALP21145 153 aa9.21□□□□□ -0.93
SCN8A-215ENST00000638820 NDUFA12Q9UI09 145 aa9.21□□□□□ -0.93
SCN8A-215ENST00000638820 TMEM223A0PJW6 202 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms