RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 K7EP34 96 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 LEPROTL1O95214 131 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 HERVK_113P61574 105 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 C12orf74Q32Q52 190 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 LITAFQ99732 161 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 SLC25A34Q6PIV7 304 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 ST20Q9HBF5 79 aa5.36□□□□□ -1.55
SCARB2-209ENST00000638409 NBEAL1Q6ZS30 2694 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 FA2HQ7L5A8 372 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 Q8N377 158 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 GPR82Q96P67 336 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 SCRT2Q9NQ03 307 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 C19orf71A6NCJ1 209 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 LTAP01374 205 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 CHCHD1Q96BP2 118 aaKnown RBP5.35□□□□□ -1.55
SCARB2-209ENST00000638409 TMEM191AQ9H0A3 160 aa5.35□□□□□ -1.55
SCARB2-209ENST00000638409 MEGF8Q7Z7M0 2845 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 IGHV3-74A0A0B4J1X5 117 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 A8MWL6 223 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 NCR2O95944 276 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 TCRAP04437 139 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 IL4P05112 153 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 Q86TA4 180 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 DYNLRB2Q8TF09 96 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 FAM104AQ969W3 186 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 CHAC1Q9BUX1 264 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 RHPN1-AS1Q9BWJ2 59 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 NAA38Q9BRA0 125 aaKnown RBP5.34□□□□□ -1.55
SCARB2-209ENST00000638409 ZNF492Q9P255 531 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 RABAC1Q9UI14 185 aa5.34□□□□□ -1.55
SCARB2-209ENST00000638409 H3BUT2 72 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 AP1S3Q96PC3 154 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 IGHV3OR16-8A0A075B7F1 116 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 TRAV2A0A0B4J234 112 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 IGLV2-11P01706 119 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 ARMS2P0C7Q2 107 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 LYZP61626 148 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 TMEM189A5PLL7 270 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 C2orf91Q6ZV80 131 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
SCARB2-209ENST00000638409 KRTAP16-1A8MUX0 517 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 FXYD7P58549 80 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 HIST1H1AQ02539 215 aaPredicted RBP5.32□□□□□ -1.56
SCARB2-209ENST00000638409 CEND1Q8N111 149 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 OR5A1Q8NGJ0 315 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 OR10AG1Q8NH19 301 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 CARD19Q96LW7 228 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 H3BRM9 83 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 CXCL5P42830 114 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 CMC4P56277 68 aaPredicted RBP5.32□□□□□ -1.56
SCARB2-209ENST00000638409 KRTAP15-1Q3LI76 137 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 LINC01545Q5VT33 79 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 OR8A1Q8NGG7 326 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 NDFIP1Q9BT67 221 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 GFRA4Q9GZZ7 299 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 C11orf68Q9H3H3 251 aaKnown RBP5.32□□□□□ -1.56
SCARB2-209ENST00000638409 MRPL16Q9NX20 251 aaKnown RBP5.32□□□□□ -1.56
SCARB2-209ENST00000638409 HSPB8Q9UJY1 196 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 HIGD1AQ9Y241 93 aa5.32□□□□□ -1.56
SCARB2-209ENST00000638409 K7EIL1 84 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 SPCS1Q9Y6A9 102 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 IGHV3-49A0A0A0MS15 119 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 H3BRN7 92 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 COX8AP10176 69 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 SEC11AP67812 179 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 FOXI2Q6ZQN5 318 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 SHANK2-AS3Q9BTD1 123 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 OTORQ9NRC9 128 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 NOTCH1P46531 2555 aa5.31□□□□□ -1.56
SCARB2-209ENST00000638409 TMSB15BA0A087X1C1 80 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 A0A1B0GUT8 65 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 IFI27P40305 119 aaPredicted RBP5.3□□□□□ -1.56
SCARB2-209ENST00000638409 HRCT1Q6UXD1 115 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 GTSCR1Q86UQ5 136 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 BPIFA4PQ86YQ2 179 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 ERG28Q9UKR5 140 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 A0A096LNJ9 63 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 IGHV3-66A0A0C4DH42 116 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 NDUFC2O95298 119 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 DCANP1Q8TF63 244 aa5.3□□□□□ -1.56
SCARB2-209ENST00000638409 A0A1W2PPM0 123 aa5.29□□□□□ -1.56
SCARB2-209ENST00000638409 NOTCH3Q9UM47 2321 aa5.29□□□□□ -1.56
SCARB2-209ENST00000638409 A8MUN3 132 aa5.29□□□□□ -1.56
SCARB2-209ENST00000638409 PRB2P02812 416 aaPredicted RBP5.29□□□□□ -1.56
SCARB2-209ENST00000638409 CRIP1P50238 77 aa5.29□□□□□ -1.56
SCARB2-209ENST00000638409 RAB37Q96AX2 223 aa5.29□□□□□ -1.56
SCARB2-209ENST00000638409 C8orf17Q9NRJ1 99 aa5.29□□□□□ -1.56
SCARB2-209ENST00000638409 SMAD5-AS1Q9Y6J3 95 aa5.29□□□□□ -1.56
SCARB2-209ENST00000638409 D6R8Y8 96 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 J3QR89 54 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 M0R3E3 92 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 CD7P09564 240 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 ZFAND6Q6FIF0 208 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 Q8N3U1 123 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 LST1O00453 97 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 AMN1Q8IY45 258 aa5.28□□□□□ -1.56
SCARB2-209ENST00000638409 CSN1S1P47710 185 aa5.27□□□□□ -1.57
SCARB2-209ENST00000638409 NMUP48645 174 aa5.27□□□□□ -1.57
SCARB2-209ENST00000638409 TMEM14CQ9P0S9 112 aa5.27□□□□□ -1.57
SCARB2-209ENST00000638409 SORL1Q92673 2214 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms