RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 TNFRSF13BO14836 293 aaPredicted RBP13.27□□□□□ -0.29
CACNA1A-227ENST00000636549 MIFP14174 115 aa13.27□□□□□ -0.29
CACNA1A-227ENST00000636549 XGP55808 180 aa13.27□□□□□ -0.29
CACNA1A-227ENST00000636549 LMO4P61968 165 aa13.26□□□□□ -0.29
CACNA1A-227ENST00000636549 FAM167A-AS1Q96KT0 104 aa13.26□□□□□ -0.29
CACNA1A-227ENST00000636549 FSHBP01225 129 aa13.26□□□□□ -0.29
CACNA1A-227ENST00000636549 IGLV3-1P01715 115 aa13.25□□□□□ -0.29
CACNA1A-227ENST00000636549 ZNF706Q9Y5V0 76 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-227ENST00000636549 IL15RAQ13261 267 aa13.25□□□□□ -0.29
CACNA1A-227ENST00000636549 LINC00322Q6ZN03 302 aaPredicted RBP13.25□□□□□ -0.29
CACNA1A-227ENST00000636549 J3KT08 172 aa13.25□□□□□ -0.29
CACNA1A-227ENST00000636549 TMEM89A2RUT3 159 aa13.25□□□□□ -0.29
CACNA1A-227ENST00000636549 LOC107984640A0A0U1RRK4 108 aa13.24□□□□□ -0.29
CACNA1A-227ENST00000636549 M0QXV9 152 aa13.24□□□□□ -0.29
CACNA1A-227ENST00000636549 G3V4G9 280 aa13.24□□□□□ -0.29
CACNA1A-227ENST00000636549 C9orf116Q5BN46 136 aaPredicted RBP13.24□□□□□ -0.29
CACNA1A-227ENST00000636549 LINC01006Q8NI28 216 aa13.23□□□□□ -0.29
CACNA1A-227ENST00000636549 TRBV6-5A0A0K0K1A5 114 aa13.23□□□□□ -0.29
CACNA1A-227ENST00000636549 C10orf25Q5T742 122 aa13.22□□□□□ -0.29
CACNA1A-227ENST00000636549 SHANK1Q9Y566 2161 aa13.22□□□□□ -0.29
CACNA1A-227ENST00000636549 IGLC6P0CF74 106 aa13.22□□□□□ -0.29
CACNA1A-227ENST00000636549 EXPH5Q8NEV8 1989 aa13.22□□□□□ -0.29
CACNA1A-227ENST00000636549 TMEM223A0PJW6 202 aa13.21□□□□□ -0.29
CACNA1A-227ENST00000636549 PCOTHQ58A44 107 aa13.21□□□□□ -0.29
CACNA1A-227ENST00000636549 LINC01545Q5VT33 79 aa13.21□□□□□ -0.29
CACNA1A-227ENST00000636549 Q8N9L7 120 aa13.21□□□□□ -0.29
CACNA1A-227ENST00000636549 MED13LQ71F56 2210 aa13.21□□□□□ -0.3
CACNA1A-227ENST00000636549 IGLV4-69A0A075B6H9 119 aa13.21□□□□□ -0.3
CACNA1A-227ENST00000636549 IGLV1-47P01700 117 aa13.21□□□□□ -0.3
CACNA1A-227ENST00000636549 LRRC75A-AS1Q8N1F1 130 aa13.2□□□□□ -0.3
CACNA1A-227ENST00000636549 C6orf223Q8N319 242 aa13.2□□□□□ -0.3
CACNA1A-227ENST00000636549 PLXNB3Q9ULL4 1909 aa13.2□□□□□ -0.3
CACNA1A-227ENST00000636549 SERTAD4-AS1Q5TG53 156 aa13.19□□□□□ -0.3
CACNA1A-227ENST00000636549 ZNF702PQ9H963 129 aa13.19□□□□□ -0.3
CACNA1A-227ENST00000636549 GPR179Q6PRD1 2367 aa13.19□□□□□ -0.3
CACNA1A-227ENST00000636549 SMIM9A6NGZ8 99 aa13.19□□□□□ -0.3
CACNA1A-227ENST00000636549 SPANXCQ9NY87 97 aa13.19□□□□□ -0.3
CACNA1A-227ENST00000636549 KRTAP10-9P60411 292 aa13.18□□□□□ -0.3
CACNA1A-227ENST00000636549 SBSPONQ8IVN8 264 aa13.18□□□□□ -0.3
CACNA1A-227ENST00000636549 DSCAMO60469 2012 aa13.18□□□□□ -0.3
CACNA1A-227ENST00000636549 NDUFA7O95182 113 aa13.18□□□□□ -0.3
CACNA1A-227ENST00000636549 TIMM17BO60830 172 aa13.17□□□□□ -0.3
CACNA1A-227ENST00000636549 Q6ZQY7 126 aa13.17□□□□□ -0.3
CACNA1A-227ENST00000636549 RBX1P62877 108 aa13.17□□□□□ -0.3
CACNA1A-227ENST00000636549 MRPL55Q7Z7F7 128 aaKnown RBP13.17□□□□□ -0.3
CACNA1A-227ENST00000636549 CTRLP40313 264 aa13.16□□□□□ -0.3
CACNA1A-227ENST00000636549 PRR3P79522 188 aaKnown RBP13.16□□□□□ -0.3
CACNA1A-227ENST00000636549 LINC00337Q8N6G1 96 aa13.16□□□□□ -0.3
CACNA1A-227ENST00000636549 SPANXDQ9BXN6 97 aa13.16□□□□□ -0.3
CACNA1A-227ENST00000636549 C1orf229Q6ZS94 237 aaPredicted RBP13.16□□□□□ -0.3
CACNA1A-227ENST00000636549 IGLV4-3A0A075B6K6 122 aa13.16□□□□□ -0.3
CACNA1A-227ENST00000636549 TRBV27A0A0K0K1C4 114 aa13.16□□□□□ -0.3
CACNA1A-227ENST00000636549 K7EQG2 157 aa13.15□□□□□ -0.3
CACNA1A-227ENST00000636549 SPANXB1Q9NS25 103 aaPredicted RBP13.15□□□□□ -0.3
CACNA1A-227ENST00000636549 FREM1Q5H8C1 2179 aa13.14□□□□□ -0.31
CACNA1A-227ENST00000636549 U3KQK5 164 aa13.14□□□□□ -0.31
CACNA1A-227ENST00000636549 C1orf134Q5TEV5 83 aa13.13□□□□□ -0.31
CACNA1A-227ENST00000636549 LINC00308Q8TCZ7 52 aa13.13□□□□□ -0.31
CACNA1A-227ENST00000636549 KRTAP27-1Q3LI81 207 aa13.12□□□□□ -0.31
CACNA1A-227ENST00000636549 MT-ATP8P03928 68 aa13.12□□□□□ -0.31
CACNA1A-227ENST00000636549 Q6ZSR3 168 aa13.12□□□□□ -0.31
CACNA1A-227ENST00000636549 CRIP2P52943 208 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-227ENST00000636549 WNK1Q9H4A3 2382 aa13.11□□□□□ -0.31
CACNA1A-227ENST00000636549 ODF3BA8MYP8 253 aa13.11□□□□□ -0.31
CACNA1A-227ENST00000636549 TRIAP1O43715 76 aa13.11□□□□□ -0.31
CACNA1A-227ENST00000636549 LINC00959A0A1B0GUT2 108 aa13.11□□□□□ -0.31
CACNA1A-227ENST00000636549 M0R378 163 aa13.11□□□□□ -0.31
CACNA1A-227ENST00000636549 Q6ZTC4 211 aa13.1□□□□□ -0.31
CACNA1A-227ENST00000636549 PRLHP81277 87 aa13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 RAI1Q7Z5J4 1906 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 CDSNQ15517 529 aa13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 SMIM11BQ8TCY0 68 aa13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 PYGO1Q9Y3Y4 419 aa13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 NUP210LQ5VU65 1888 aa13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 ZFHX2Q9C0A1 2572 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 NDUFC2-KCTD14E9PQ53 114 aa13.09□□□□□ -0.31
CACNA1A-227ENST00000636549 REG3GQ6UW15 175 aa13.08□□□□□ -0.32
CACNA1A-227ENST00000636549 ZNF22P17026 224 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-227ENST00000636549 CREBBPQ92793 2442 aa13.08□□□□□ -0.32
CACNA1A-227ENST00000636549 LELP1Q5T871 98 aa13.08□□□□□ -0.32
CACNA1A-227ENST00000636549 MAPKAPK5-AS1Q8N8E1 139 aa13.08□□□□□ -0.32
CACNA1A-227ENST00000636549 PTPRQQ9UMZ3 2332 aa13.08□□□□□ -0.32
CACNA1A-227ENST00000636549 BEAN1Q3B7T3 259 aa13.08□□□□□ -0.32
CACNA1A-227ENST00000636549 RPL28P46779 137 aaKnown RBP13.07□□□□□ -0.32
CACNA1A-227ENST00000636549 TRBV7-6A0A0J9YX20 115 aa13.07□□□□□ -0.32
CACNA1A-227ENST00000636549 PDE6GP18545 87 aa13.07□□□□□ -0.32
CACNA1A-227ENST00000636549 MUC4Q99102 2169 aa13.07□□□□□ -0.32
CACNA1A-227ENST00000636549 CYSRT1A8MQ03 144 aa13.06□□□□□ -0.32
CACNA1A-227ENST00000636549 DHRS4-AS1Q9P1J3 65 aa13.06□□□□□ -0.32
CACNA1A-227ENST00000636549 FAM240AA0A1B0GVK7 77 aa13.06□□□□□ -0.32
CACNA1A-227ENST00000636549 C19orf71A6NCJ1 209 aa13.05□□□□□ -0.32
CACNA1A-227ENST00000636549 COA6Q5JTJ3 125 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-227ENST00000636549 M0QY20 66 aa13.05□□□□□ -0.32
CACNA1A-227ENST00000636549 RNASE8Q8TDE3 154 aaKnown RBP13.05□□□□□ -0.32
CACNA1A-227ENST00000636549 CD164L2Q6UWJ8 174 aa13.05□□□□□ -0.32
CACNA1A-227ENST00000636549 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
CACNA1A-227ENST00000636549 SOSTDC1Q6X4U4 206 aa13.04□□□□□ -0.32
CACNA1A-227ENST00000636549 CACNA1HO95180 2353 aa13.04□□□□□ -0.32
CACNA1A-227ENST00000636549 C10orf91Q5T1B1 145 aa13.04□□□□□ -0.32
CACNA1A-227ENST00000636549 H3BT86 120 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms