RNA–Protein interactions for RNA: ENST00000633627.1

CROCCP4-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

TSL 3 BASIC

Gene CROCCP4, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-202ENST00000633627 UBE2D4Q9Y2X8 147 aa12.87□□□□□ -0.35
CROCCP4-202ENST00000633627 CSDC2Q9Y534 153 aaKnown RBP12.87□□□□□ -0.35
CROCCP4-202ENST00000633627 RPL39P62891 51 aaKnown RBP12.86□□□□□ -0.35
CROCCP4-202ENST00000633627 OR5A1Q8NGJ0 315 aa12.86□□□□□ -0.35
CROCCP4-202ENST00000633627 TMEM18Q96B42 140 aa12.86□□□□□ -0.35
CROCCP4-202ENST00000633627 TMEM101Q96IK0 257 aa12.86□□□□□ -0.35
CROCCP4-202ENST00000633627 CDC42SE2Q9NRR3 84 aa12.86□□□□□ -0.35
CROCCP4-202ENST00000633627 TRAV8-4A0A0B4J246 113 aa12.85□□□□□ -0.35
CROCCP4-202ENST00000633627 K7EMI3 77 aa12.85□□□□□ -0.35
CROCCP4-202ENST00000633627 IFI27P40305 119 aaPredicted RBP12.85□□□□□ -0.35
CROCCP4-202ENST00000633627 SMAGPQ0VAQ4 97 aa12.85□□□□□ -0.35
CROCCP4-202ENST00000633627 WFDC2Q14508 124 aa12.83□□□□□ -0.36
CROCCP4-202ENST00000633627 DGAT2L7PQ6IED9 249 aa12.83□□□□□ -0.36
CROCCP4-202ENST00000633627 ZNF664Q8N3J9 261 aa12.83□□□□□ -0.36
CROCCP4-202ENST00000633627 FAM104AQ969W3 186 aa12.83□□□□□ -0.36
CROCCP4-202ENST00000633627 LRP1BQ9NZR2 4599 aa12.83□□□□□ -0.36
CROCCP4-202ENST00000633627 IGLV10-54A0A075B6I4 117 aa12.82□□□□□ -0.36
CROCCP4-202ENST00000633627 EREGO14944 169 aa12.82□□□□□ -0.36
CROCCP4-202ENST00000633627 KRTAP10-2P60368 255 aa12.82□□□□□ -0.36
CROCCP4-202ENST00000633627 ORMDL2Q53FV1 153 aa12.82□□□□□ -0.36
CROCCP4-202ENST00000633627 BAALCQ8WXS3 180 aa12.82□□□□□ -0.36
CROCCP4-202ENST00000633627 LINC01546A6NGU7 62 aa12.81□□□□□ -0.36
CROCCP4-202ENST00000633627 SPATA12Q7Z6I5 190 aa12.81□□□□□ -0.36
CROCCP4-202ENST00000633627 PRSS3P2Q8NHM4 247 aa12.81□□□□□ -0.36
CROCCP4-202ENST00000633627 SPANXA1Q9NS26 97 aa12.81□□□□□ -0.36
CROCCP4-202ENST00000633627 IGKV3OR2-268A0A0C4DH90 116 aa12.8□□□□□ -0.36
CROCCP4-202ENST00000633627 Q6ZUT4 128 aa12.8□□□□□ -0.36
CROCCP4-202ENST00000633627 LINC00959A0A1B0GUT2 108 aa12.79□□□□□ -0.36
CROCCP4-202ENST00000633627 COLCA2A8K830 154 aa12.79□□□□□ -0.36
CROCCP4-202ENST00000633627 LECT2O14960 151 aa12.79□□□□□ -0.36
CROCCP4-202ENST00000633627 C18orf32Q8TCD1 76 aa12.79□□□□□ -0.36
CROCCP4-202ENST00000633627 PYGO1Q9Y3Y4 419 aa12.79□□□□□ -0.36
CROCCP4-202ENST00000633627 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
CROCCP4-202ENST00000633627 C2orf66Q6UXQ4 117 aa12.78□□□□□ -0.36
CROCCP4-202ENST00000633627 Q8N814 137 aa12.78□□□□□ -0.36
CROCCP4-202ENST00000633627 CYSLTR1Q9Y271 337 aa12.78□□□□□ -0.36
CROCCP4-202ENST00000633627 SCO1O75880 301 aa12.77□□□□□ -0.37
CROCCP4-202ENST00000633627 RNASE13Q5GAN3 156 aaKnown RBP12.77□□□□□ -0.37
CROCCP4-202ENST00000633627 CHCHD10Q8WYQ3 142 aaPredicted RBP12.77□□□□□ -0.37
CROCCP4-202ENST00000633627 OPRPNQ99935 248 aaPredicted RBP12.77□□□□□ -0.37
CROCCP4-202ENST00000633627 PGPEP1Q9NXJ5 209 aa12.77□□□□□ -0.37
CROCCP4-202ENST00000633627 URB1-AS1Q96HZ7 61 aa12.76□□□□□ -0.37
CROCCP4-202ENST00000633627 GAGE12HA6NDE8 117 aa12.75□□□□□ -0.37
CROCCP4-202ENST00000633627 FA2HQ7L5A8 372 aa12.75□□□□□ -0.37
CROCCP4-202ENST00000633627 IGLV4-3A0A075B6K6 122 aa12.74□□□□□ -0.37
CROCCP4-202ENST00000633627 IGIPA6NJ69 53 aa12.74□□□□□ -0.37
CROCCP4-202ENST00000633627 G0S2P27469 103 aa12.74□□□□□ -0.37
CROCCP4-202ENST00000633627 FUSP35637 526 aaKnown RBP eCLIP12.74□□□□□ -0.37
CROCCP4-202ENST00000633627 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
CROCCP4-202ENST00000633627 TOMM6Q96B49 74 aa12.74□□□□□ -0.37
CROCCP4-202ENST00000633627 USP17L23D6RBM5 183 aa12.73□□□□□ -0.37
CROCCP4-202ENST00000633627 CCL25O15444 150 aa12.73□□□□□ -0.37
CROCCP4-202ENST00000633627 TRGC2P03986 189 aa12.73□□□□□ -0.37
CROCCP4-202ENST00000633627 SS18Q15532 418 aa12.73□□□□□ -0.37
CROCCP4-202ENST00000633627 NTN5Q8WTR8 489 aaPredicted RBP12.73□□□□□ -0.37
CROCCP4-202ENST00000633627 C16orf90A8MZG2 172 aa12.72□□□□□ -0.37
CROCCP4-202ENST00000633627 C1orf196B1AJZ1 125 aa12.72□□□□□ -0.37
CROCCP4-202ENST00000633627 NPSP0C0P6 89 aa12.72□□□□□ -0.37
CROCCP4-202ENST00000633627 XCL1P47992 114 aa12.72□□□□□ -0.37
CROCCP4-202ENST00000633627 FOXI1Q12951 378 aa12.72□□□□□ -0.37
CROCCP4-202ENST00000633627 AP5S1Q9NUS5 200 aa12.72□□□□□ -0.37
CROCCP4-202ENST00000633627 TRAV13-1A0A0B4J241 112 aa12.71□□□□□ -0.37
CROCCP4-202ENST00000633627 LINC00614P0C842 121 aa12.71□□□□□ -0.37
CROCCP4-202ENST00000633627 TMEM141Q96I45 108 aa12.71□□□□□ -0.37
CROCCP4-202ENST00000633627 C14orf177Q52M58 125 aa12.7□□□□□ -0.38
CROCCP4-202ENST00000633627 CD164L2Q6UWJ8 174 aa12.7□□□□□ -0.38
CROCCP4-202ENST00000633627 TIMM17AQ99595 171 aa12.7□□□□□ -0.38
CROCCP4-202ENST00000633627 DNAH8Q96JB1 4490 aa12.69□□□□□ -0.38
CROCCP4-202ENST00000633627 LINC01549A6NIU2 74 aa12.69□□□□□ -0.38
CROCCP4-202ENST00000633627 ATP6V1G1O75348 118 aa12.69□□□□□ -0.38
CROCCP4-202ENST00000633627 S100A1P23297 94 aa12.69□□□□□ -0.38
CROCCP4-202ENST00000633627 AMELXQ99217 191 aa12.69□□□□□ -0.38
CROCCP4-202ENST00000633627 KIAA1109Q2LD37 5005 aa12.69□□□□□ -0.38
CROCCP4-202ENST00000633627 APOBP04114 4563 aaKnown RBP12.69□□□□□ -0.38
CROCCP4-202ENST00000633627 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.68□□□□□ -0.38
CROCCP4-202ENST00000633627 A0A096LNJ9 63 aa12.68□□□□□ -0.38
CROCCP4-202ENST00000633627 IFITM10A6NMD0 228 aa12.68□□□□□ -0.38
CROCCP4-202ENST00000633627 PRSS1P07477 247 aa12.68□□□□□ -0.38
CROCCP4-202ENST00000633627 RAB5BP61020 215 aa12.68□□□□□ -0.38
CROCCP4-202ENST00000633627 LINC00173Q6ZV60 143 aa12.68□□□□□ -0.38
CROCCP4-202ENST00000633627 ERASQ7Z444 233 aa12.68□□□□□ -0.38
CROCCP4-202ENST00000633627 IGLV5-52A0A0A0MRZ9 124 aa12.67□□□□□ -0.38
CROCCP4-202ENST00000633627 C15orf56Q8N910 161 aa12.67□□□□□ -0.38
CROCCP4-202ENST00000633627 ZC2HC1BQ5TFG8 222 aa12.66□□□□□ -0.38
CROCCP4-202ENST00000633627 Q6ZN92 141 aa12.66□□□□□ -0.38
CROCCP4-202ENST00000633627 TEX43Q6ZNM6 134 aa12.66□□□□□ -0.38
CROCCP4-202ENST00000633627 SCGB3A1Q96QR1 104 aa12.66□□□□□ -0.38
CROCCP4-202ENST00000633627 VCX2Q9H322 139 aa12.66□□□□□ -0.38
CROCCP4-202ENST00000633627 CFAP161Q6P656 301 aa12.65□□□□□ -0.38
CROCCP4-202ENST00000633627 RYR1P21817 5038 aa12.65□□□□□ -0.38
CROCCP4-202ENST00000633627 UBE2D1P51668 147 aa12.64□□□□□ -0.39
CROCCP4-202ENST00000633627 PAPPA-AS1Q5QFB9 102 aa12.64□□□□□ -0.39
CROCCP4-202ENST00000633627 CHCHD1Q96BP2 118 aaKnown RBP12.64□□□□□ -0.39
CROCCP4-202ENST00000633627 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
CROCCP4-202ENST00000633627 HBDP02042 147 aa12.63□□□□□ -0.39
CROCCP4-202ENST00000633627 GCSHP23434 173 aa12.63□□□□□ -0.39
CROCCP4-202ENST00000633627 KRTAP10-1P60331 282 aa12.63□□□□□ -0.39
CROCCP4-202ENST00000633627 LINC00242Q5T6M2 205 aa12.63□□□□□ -0.39
CROCCP4-202ENST00000633627 C2orf88Q9BSF0 95 aa12.63□□□□□ -0.39
CROCCP4-202ENST00000633627 COX7A2LO14548 114 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms