RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 SBSPONQ8IVN8 264 aa10.04□□□□□ -0.8
LIMS4-204ENST00000632897 Q8NAQ8 132 aa10.04□□□□□ -0.8
LIMS4-204ENST00000632897 NOTCH1P46531 2555 aa10.04□□□□□ -0.8
LIMS4-204ENST00000632897 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
LIMS4-204ENST00000632897 CEMP1Q6PRD7 247 aaPredicted RBP10.04□□□□□ -0.8
LIMS4-204ENST00000632897 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
LIMS4-204ENST00000632897 TRBV25-1A0A075B6N4 114 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 LOC100131303A0A0U1RQF7 123 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 MYMXA0A1B0GTQ4 84 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
LIMS4-204ENST00000632897 DGAT2L7PQ6IED9 249 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 Q6ZUT4 128 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 MAPKAPK5-AS1Q8N8E1 139 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 TTTY13Q9BZ97 58 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 PRO0255Q9UI72 69 aa10.03□□□□□ -0.8
LIMS4-204ENST00000632897 A0A0J9YXV3 536 aa10.02□□□□□ -0.81
LIMS4-204ENST00000632897 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
LIMS4-204ENST00000632897 SEC11AP67812 179 aa10.02□□□□□ -0.81
LIMS4-204ENST00000632897 KPRPQ5T749 579 aaPredicted RBP10.02□□□□□ -0.81
LIMS4-204ENST00000632897 SAMD5Q5TGI4 173 aa10.02□□□□□ -0.81
LIMS4-204ENST00000632897 NOTCH3Q9UM47 2321 aa10.01□□□□□ -0.81
LIMS4-204ENST00000632897 TEX48A0A1B0GUV7 120 aa10.01□□□□□ -0.81
LIMS4-204ENST00000632897 TMEM223A0PJW6 202 aa10.01□□□□□ -0.81
LIMS4-204ENST00000632897 DAD1P61803 113 aa10.01□□□□□ -0.81
LIMS4-204ENST00000632897 TGP01266 2768 aa10□□□□□ -0.81
LIMS4-204ENST00000632897 G3V4G9 280 aa10□□□□□ -0.81
LIMS4-204ENST00000632897 UBE2L6O14933 153 aa10□□□□□ -0.81
LIMS4-204ENST00000632897 SPART-AS1P0CW21 52 aa10□□□□□ -0.81
LIMS4-204ENST00000632897 TAL2Q16559 108 aa10□□□□□ -0.81
LIMS4-204ENST00000632897 TRBV6-8A0A0A6YYG3 113 aa9.99□□□□□ -0.81
LIMS4-204ENST00000632897 LEPROTO15243 131 aa9.99□□□□□ -0.81
LIMS4-204ENST00000632897 GYPEP15421 78 aa9.99□□□□□ -0.81
LIMS4-204ENST00000632897 ZNF25P17030 456 aaPredicted RBP9.99□□□□□ -0.81
LIMS4-204ENST00000632897 UBE2D1P51668 147 aa9.99□□□□□ -0.81
LIMS4-204ENST00000632897 OR5A1Q8NGJ0 315 aa9.99□□□□□ -0.81
LIMS4-204ENST00000632897 ORAOV1Q8WV07 137 aa9.99□□□□□ -0.81
LIMS4-204ENST00000632897 TMEM101Q96IK0 257 aa9.99□□□□□ -0.81
LIMS4-204ENST00000632897 ZNF815PA8K554 130 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 TIRAPP58753 221 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 RNASE13Q5GAN3 156 aaKnown RBP9.98□□□□□ -0.81
LIMS4-204ENST00000632897 AMMECR1LQ6DCA0 310 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 PLEKHB2Q96CS7 222 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 CMYA5Q8N3K9 4069 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 J3QQQ9 107 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 DEFB4AO15263 64 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 PAX4O43316 350 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 ATP5G1P05496 136 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 FAM19A3Q7Z5A8 133 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 ATP6V0E2Q8NHE4 81 aa9.98□□□□□ -0.81
LIMS4-204ENST00000632897 A6NDN8 102 aa9.97□□□□□ -0.81
LIMS4-204ENST00000632897 LGALS3P17931 250 aaKnown RBP9.97□□□□□ -0.81
LIMS4-204ENST00000632897 MRAPQ8TCY5 172 aa9.97□□□□□ -0.81
LIMS4-204ENST00000632897 GEMIN7Q9H840 131 aaKnown RBP9.97□□□□□ -0.81
LIMS4-204ENST00000632897 CDC42SE2Q9NRR3 84 aa9.97□□□□□ -0.81
LIMS4-204ENST00000632897 CELA1Q9UNI1 258 aa9.97□□□□□ -0.81
LIMS4-204ENST00000632897 IGLV5-45A0A087WSX0 123 aa9.96□□□□□ -0.82
LIMS4-204ENST00000632897 H3BRM9 83 aa9.95□□□□□ -0.82
LIMS4-204ENST00000632897 TSPEAR-AS2P59090 65 aa9.95□□□□□ -0.82
LIMS4-204ENST00000632897 HERVK_113P63121 156 aa9.95□□□□□ -0.82
LIMS4-204ENST00000632897 CEND1Q8N111 149 aa9.95□□□□□ -0.82
LIMS4-204ENST00000632897 TM2D2Q9BX73 214 aa9.95□□□□□ -0.82
LIMS4-204ENST00000632897 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
LIMS4-204ENST00000632897 IGHV1-58A0A0C4DH39 117 aa9.94□□□□□ -0.82
LIMS4-204ENST00000632897 SCGB1D4Q6XE38 83 aa9.94□□□□□ -0.82
LIMS4-204ENST00000632897 LINC00469Q8N7U9 141 aa9.94□□□□□ -0.82
LIMS4-204ENST00000632897 COX11Q9Y6N1 276 aa9.94□□□□□ -0.82
LIMS4-204ENST00000632897 TAX1BP3O14907 124 aa9.93□□□□□ -0.82
LIMS4-204ENST00000632897 GCSHP23434 173 aa9.93□□□□□ -0.82
LIMS4-204ENST00000632897 GAGE6Q13070 117 aa9.93□□□□□ -0.82
LIMS4-204ENST00000632897 VSIG2Q96IQ7 327 aa9.93□□□□□ -0.82
LIMS4-204ENST00000632897 HIST1H4GQ99525 98 aa9.93□□□□□ -0.82
LIMS4-204ENST00000632897 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
LIMS4-204ENST00000632897 C11orf68Q9H3H3 251 aaKnown RBP9.93□□□□□ -0.82
LIMS4-204ENST00000632897 LINC00242Q5T6M2 205 aa9.92□□□□□ -0.82
LIMS4-204ENST00000632897 SH2D6Q7Z4S9 175 aa9.92□□□□□ -0.82
LIMS4-204ENST00000632897 PRKDCP78527 4128 aaKnown RBP9.92□□□□□ -0.82
LIMS4-204ENST00000632897 IGHV3-30-3P0DP02 117 aa9.91□□□□□ -0.82
LIMS4-204ENST00000632897 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
LIMS4-204ENST00000632897 A0A0J9YY99 117 aa9.91□□□□□ -0.82
LIMS4-204ENST00000632897 F5H768 121 aa9.91□□□□□ -0.82
LIMS4-204ENST00000632897 FXYD2P54710 66 aa9.91□□□□□ -0.82
LIMS4-204ENST00000632897 CDKN2A-AS1Q9UH64 79 aa9.91□□□□□ -0.82
LIMS4-204ENST00000632897 TRAV13-1A0A0B4J241 112 aa9.9□□□□□ -0.83
LIMS4-204ENST00000632897 PTTG1IPP53801 180 aa9.9□□□□□ -0.83
LIMS4-204ENST00000632897 MRPL23Q16540 153 aaKnown RBP9.9□□□□□ -0.83
LIMS4-204ENST00000632897 RETNQ9HD89 108 aa9.9□□□□□ -0.83
LIMS4-204ENST00000632897 IGHV3-64A0A075B6Q5 118 aa9.89□□□□□ -0.83
LIMS4-204ENST00000632897 A0A1B0GUV1 79 aa9.89□□□□□ -0.83
LIMS4-204ENST00000632897 PRB2P02812 416 aaPredicted RBP9.89□□□□□ -0.83
LIMS4-204ENST00000632897 SPINK8P0C7L1 97 aa9.89□□□□□ -0.83
LIMS4-204ENST00000632897 C12orf74Q32Q52 190 aa9.89□□□□□ -0.83
LIMS4-204ENST00000632897 ICOSQ9Y6W8 199 aa9.89□□□□□ -0.83
LIMS4-204ENST00000632897 TRAV8-3A0A0A6YYJ7 113 aa9.88□□□□□ -0.83
LIMS4-204ENST00000632897 SMIM13P0DJ93 91 aa9.88□□□□□ -0.83
LIMS4-204ENST00000632897 COX6A2Q02221 97 aa9.88□□□□□ -0.83
LIMS4-204ENST00000632897 IGLV4-60A0A075B6I1 120 aa9.87□□□□□ -0.83
LIMS4-204ENST00000632897 IGLV5-39A0A0G2JS06 123 aa9.87□□□□□ -0.83
LIMS4-204ENST00000632897 HTN3P15516 51 aa9.87□□□□□ -0.83
LIMS4-204ENST00000632897 SRSF9Q13242 221 aaKnown RBP eCLIP9.87□□□□□ -0.83
LIMS4-204ENST00000632897 ZFAND6Q6FIF0 208 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms