RNA–Protein interactions for RNA: ENST00000631029.1

UBA3-213, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-213ENST00000631029 DOPEY1Q5JWR5 2465 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 IGHV3-73A0A0B4J1V6 119 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 TRAV8-4A0A0B4J246 113 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 TRAV4A0A0B4J268 109 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 A8MZ25 164 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 SMIM1B2RUZ4 78 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 COX7A2LO14548 114 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 CRLF1O75462 422 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 TGFAP01135 160 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 COX6CP09669 75 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 COX6A2Q02221 97 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 ODF3L2Q3SX64 289 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 C2orf82Q6UX34 121 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 SOSTDC1Q6X4U4 206 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 NTM-AS1Q6ZSK4 140 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 C18orf65Q6ZTR6 163 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 LRRC75A-AS1Q8N1F1 130 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 TEX29Q8N6K0 151 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 C22orf24Q9Y442 160 aa4.33□□□□□ -1.72
UBA3-213ENST00000631029 UTP20O75691 2785 aaKnown RBP4.33□□□□□ -1.72
UBA3-213ENST00000631029 TEX15Q9BXT5 2789 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 SVEP1Q4LDE5 3571 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 PTPN13Q12923 2485 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 PRRC2AP48634 2157 aaKnown RBP4.32□□□□□ -1.72
UBA3-213ENST00000631029 TRACP01848 142 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 LINC00694P0DN24 101 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 NDUFV3P56181 108 aaKnown RBP4.32□□□□□ -1.72
UBA3-213ENST00000631029 HERV-K104P63124 156 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 Q1RN00 199 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 RNASE13Q5GAN3 156 aaKnown RBP4.32□□□□□ -1.72
UBA3-213ENST00000631029 FAM222AQ5U5X8 452 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 Q6ZSV7 163 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 COPS9Q8WXC6 57 aa4.32□□□□□ -1.72
UBA3-213ENST00000631029 UNC79Q9P2D8 2635 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 CELSR1Q9NYQ6 3014 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 H7C2G1 150 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 K7EQD1 137 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 SNCGO76070 127 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 PF4P02776 101 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 PRM2P04554 102 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 ACYP1P07311 99 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 GAGE2BQ13066 116 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 GAGE5Q13069 117 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 GAGE6Q13070 117 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 DAZ2Q13117 558 aaKnown RBP4.31□□□□□ -1.72
UBA3-213ENST00000631029 GAGE2EQ4V326 116 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 DAZ4Q86SG3 579 aaKnown RBP4.31□□□□□ -1.72
UBA3-213ENST00000631029 C15orf53Q8NAA6 179 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 CLEC2BQ92478 149 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 FAM110AQ9BQ89 295 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 ANAPC13Q9BS18 74 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 IMUPQ9GZP8 106 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 DAZ3Q9NR90 486 aaKnown RBP4.31□□□□□ -1.72
UBA3-213ENST00000631029 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 GAGE2DQ9UEU5 116 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 ZFHX3Q15911 3703 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 NBASA2RRP1 2371 aa4.31□□□□□ -1.72
UBA3-213ENST00000631029 SPTAN1Q13813 2472 aaKnown RBP4.3□□□□□ -1.72
UBA3-213ENST00000631029 IGHV3-38A0A0C4DH36 116 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 PLAC8L1A1L4L8 177 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 PRSS2P07478 247 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 RPL36AP83881 106 aaKnown RBP4.3□□□□□ -1.72
UBA3-213ENST00000631029 CIRBPQ14011 172 aaKnown RBP4.3□□□□□ -1.72
UBA3-213ENST00000631029 DEFB136Q30KP8 78 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 KRTAP1-3Q8IUG1 177 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 NRGNQ92686 78 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 RPL36ALQ969Q0 106 aaKnown RBP4.3□□□□□ -1.72
UBA3-213ENST00000631029 Q96MF0 132 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 LINC01587Q99440 93 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 Q9H8V8 135 aa4.3□□□□□ -1.72
UBA3-213ENST00000631029 BEX4Q9NWD9 120 aaPredicted RBP4.3□□□□□ -1.72
UBA3-213ENST00000631029 CR1P17927 2039 aa4.29□□□□□ -1.72
UBA3-213ENST00000631029 AKAP6Q13023 2319 aa4.29□□□□□ -1.72
UBA3-213ENST00000631029 FLNCQ14315 2725 aa4.29□□□□□ -1.72
UBA3-213ENST00000631029 GIG44P09565 113 aaPredicted RBP4.29□□□□□ -1.72
UBA3-213ENST00000631029 RPL28P46779 137 aaKnown RBP4.29□□□□□ -1.72
UBA3-213ENST00000631029 OVOL2Q9BRP0 275 aa4.29□□□□□ -1.72
UBA3-213ENST00000631029 TRBV6-4A0A1B0GX49 114 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 GAGE12JA6NER3 117 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 GAGE7O76087 117 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 GAGE12FP0CL80 117 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 GAGE12GP0CL81 117 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 GAGE12IP0CL82 117 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 CMC4P56277 68 aaPredicted RBP4.28□□□□□ -1.72
UBA3-213ENST00000631029 GAGE4Q13068 117 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 DAND5Q8N907 189 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 DYNLRB2Q8TF09 96 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 C19orf73Q9NVV2 129 aa4.28□□□□□ -1.72
UBA3-213ENST00000631029 USP9YO00507 2555 aaPredicted RBP4.28□□□□□ -1.72
UBA3-213ENST00000631029 TEP1Q99973 2627 aaKnown RBP4.27□□□□□ -1.73
UBA3-213ENST00000631029 IGKV2-28A0A075B6P5 120 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 IGKV2D-28P01615 120 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 HTN1P15515 57 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 NPC2P61916 151 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 DEFB113Q30KQ7 82 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 HIST2H2BDQ6DRA6 164 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 DGAT2L7PQ6IED9 249 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 Q6ZTI0 123 aa4.27□□□□□ -1.73
UBA3-213ENST00000631029 LINC00643Q86TS7 51 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms