RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 AP5S1Q9NUS5 200 aa12.61□□□□□ -0.39
MECP2-216ENST00000627864 CSDC2Q9Y534 153 aaKnown RBP12.61□□□□□ -0.39
MECP2-216ENST00000627864 IGKV2D-24A0A075B6R9 120 aa12.6□□□□□ -0.39
MECP2-216ENST00000627864 MIAQ16674 131 aa12.6□□□□□ -0.39
MECP2-216ENST00000627864 Q6ZRN7 208 aaPredicted RBP12.6□□□□□ -0.39
MECP2-216ENST00000627864 BAGE3Q86Y29 109 aa12.6□□□□□ -0.39
MECP2-216ENST00000627864 RMI2Q96E14 147 aa12.6□□□□□ -0.39
MECP2-216ENST00000627864 RNASE13Q5GAN3 156 aaKnown RBP12.59□□□□□ -0.39
MECP2-216ENST00000627864 OPRPNQ99935 248 aaPredicted RBP12.59□□□□□ -0.39
MECP2-216ENST00000627864 TM2D2Q9BX73 214 aa12.59□□□□□ -0.39
MECP2-216ENST00000627864 PSCAO43653 123 aa12.58□□□□□ -0.4
MECP2-216ENST00000627864 Q6ZUT4 128 aa12.58□□□□□ -0.4
MECP2-216ENST00000627864 TOMM6Q96B49 74 aa12.58□□□□□ -0.4
MECP2-216ENST00000627864 C1orf43Q9BWL3 253 aa12.58□□□□□ -0.4
MECP2-216ENST00000627864 PYGO1Q9Y3Y4 419 aa12.58□□□□□ -0.4
MECP2-216ENST00000627864 IGLV10-54A0A075B6I4 117 aa12.57□□□□□ -0.4
MECP2-216ENST00000627864 MRPS36P82909 103 aaKnown RBP12.56□□□□□ -0.4
MECP2-216ENST00000627864 FAM104AQ969W3 186 aa12.56□□□□□ -0.4
MECP2-216ENST00000627864 CHCHD1Q96BP2 118 aaKnown RBP12.56□□□□□ -0.4
MECP2-216ENST00000627864 COX11Q9Y6N1 276 aa12.56□□□□□ -0.4
MECP2-216ENST00000627864 TRAV8-4A0A0B4J246 113 aa12.55□□□□□ -0.4
MECP2-216ENST00000627864 PRSS29PA6NIE9 313 aa12.55□□□□□ -0.4
MECP2-216ENST00000627864 PMCHL1Q16048 86 aa12.55□□□□□ -0.4
MECP2-216ENST00000627864 LINC00336Q6ZUF6 198 aa12.55□□□□□ -0.4
MECP2-216ENST00000627864 SCGB3A1Q96QR1 104 aa12.55□□□□□ -0.4
MECP2-216ENST00000627864 IGLV4-3A0A075B6K6 122 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 LINC01549A6NIU2 74 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 IGIPA6NJ69 53 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BKO60814 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BJP06899 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BOP23527 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BBP33778 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BDP58876 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BCP62807 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 TNP2Q05952 138 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST2H2BEQ16778 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BHQ93079 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 TMEM141Q96I45 108 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BNQ99877 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 HIST1H2BMQ99879 126 aa12.54□□□□□ -0.4
MECP2-216ENST00000627864 A0A096LNJ9 63 aa12.53□□□□□ -0.4
MECP2-216ENST00000627864 LINC00959A0A1B0GUT2 108 aa12.53□□□□□ -0.4
MECP2-216ENST00000627864 C1orf196B1AJZ1 125 aa12.53□□□□□ -0.4
MECP2-216ENST00000627864 SS18Q15532 418 aa12.53□□□□□ -0.4
MECP2-216ENST00000627864 ERASQ7Z444 233 aa12.53□□□□□ -0.4
MECP2-216ENST00000627864 HSBP1O75506 76 aa12.52□□□□□ -0.41
MECP2-216ENST00000627864 SERF1AO75920 110 aa12.52□□□□□ -0.41
MECP2-216ENST00000627864 HBDP02042 147 aa12.52□□□□□ -0.41
MECP2-216ENST00000627864 TIMM17AQ99595 171 aa12.52□□□□□ -0.41
MECP2-216ENST00000627864 RYR3Q15413 4870 aa12.52□□□□□ -0.41
MECP2-216ENST00000627864 TRAV13-1A0A0B4J241 112 aa12.51□□□□□ -0.41
MECP2-216ENST00000627864 KRTAP26-1Q6PEX3 210 aa12.51□□□□□ -0.41
MECP2-216ENST00000627864 Q6ZN92 141 aa12.51□□□□□ -0.41
MECP2-216ENST00000627864 MAPKAPK5-AS1Q8N8E1 139 aa12.51□□□□□ -0.41
MECP2-216ENST00000627864 CHCHD10Q8WYQ3 142 aaPredicted RBP12.51□□□□□ -0.41
MECP2-216ENST00000627864 GAGE12HA6NDE8 117 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 IFITM10A6NMD0 228 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 NPSP0C0P6 89 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 LINC00310P59036 64 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 ZC2HC1BQ5TFG8 222 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 TEX43Q6ZNM6 134 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 BAALCQ8WXS3 180 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 VCX2Q9H322 139 aa12.5□□□□□ -0.41
MECP2-216ENST00000627864 CCL25O15444 150 aa12.49□□□□□ -0.41
MECP2-216ENST00000627864 PAPPA-AS1Q5QFB9 102 aa12.49□□□□□ -0.41
MECP2-216ENST00000627864 FAM19A2Q8N3H0 131 aa12.49□□□□□ -0.41
MECP2-216ENST00000627864 NUPR1O60356 82 aa12.48□□□□□ -0.41
MECP2-216ENST00000627864 XCL1P47992 114 aa12.48□□□□□ -0.41
MECP2-216ENST00000627864 PDZD11Q5EBL8 140 aa12.48□□□□□ -0.41
MECP2-216ENST00000627864 A0A087WTM6 91 aa12.47□□□□□ -0.41
MECP2-216ENST00000627864 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.47□□□□□ -0.41
MECP2-216ENST00000627864 LECT2O14960 151 aa12.47□□□□□ -0.41
MECP2-216ENST00000627864 LINC00173Q6ZV60 143 aa12.47□□□□□ -0.41
MECP2-216ENST00000627864 AMELXQ99217 191 aa12.47□□□□□ -0.41
MECP2-216ENST00000627864 C2orf88Q9BSF0 95 aa12.47□□□□□ -0.41
MECP2-216ENST00000627864 LRCOL1A6NCL2 159 aa12.46□□□□□ -0.41
MECP2-216ENST00000627864 EREGO14944 169 aa12.46□□□□□ -0.41
MECP2-216ENST00000627864 ATP5LO75964 103 aa12.45□□□□□ -0.42
MECP2-216ENST00000627864 NDUFA6P56556 154 aa12.45□□□□□ -0.42
MECP2-216ENST00000627864 WFDC2Q14508 124 aa12.45□□□□□ -0.42
MECP2-216ENST00000627864 FOXI1Q12951 378 aa12.44□□□□□ -0.42
MECP2-216ENST00000627864 CD164L2Q6UWJ8 174 aa12.44□□□□□ -0.42
MECP2-216ENST00000627864 FRAS1Q86XX4 4008 aa12.44□□□□□ -0.42
MECP2-216ENST00000627864 UBE2D1P51668 147 aa12.43□□□□□ -0.42
MECP2-216ENST00000627864 DNAH10Q8IVF4 4471 aa12.43□□□□□ -0.42
MECP2-216ENST00000627864 USP17L23D6RBM5 183 aa12.42□□□□□ -0.42
MECP2-216ENST00000627864 PMVKQ15126 192 aa12.42□□□□□ -0.42
MECP2-216ENST00000627864 CST9LQ9H4G1 147 aa12.42□□□□□ -0.42
MECP2-216ENST00000627864 A0A1B0GVY2 172 aa12.41□□□□□ -0.42
MECP2-216ENST00000627864 LINC00242Q5T6M2 205 aa12.41□□□□□ -0.42
MECP2-216ENST00000627864 DNAH2Q9P225 4427 aa12.41□□□□□ -0.42
MECP2-216ENST00000627864 DNAH17Q9UFH2 4485 aa12.4□□□□□ -0.42
MECP2-216ENST00000627864 LEPROTL1O95214 131 aa12.4□□□□□ -0.42
MECP2-216ENST00000627864 FABP4P15090 132 aa12.4□□□□□ -0.42
MECP2-216ENST00000627864 C5orf38Q86SI9 138 aa12.4□□□□□ -0.42
MECP2-216ENST00000627864 IFI27L1Q96BM0 104 aa12.4□□□□□ -0.42
MECP2-216ENST00000627864 COX7A2LO14548 114 aa12.39□□□□□ -0.43
MECP2-216ENST00000627864 PRSS1P07477 247 aa12.39□□□□□ -0.43
MECP2-216ENST00000627864 COX6A2Q02221 97 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms