RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 HCP5Q6MZN7 132 aa6.76□□□□□ -1.33
USB1-216ENST00000624720 PLA2G2AP14555 144 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 SNURFQ9Y675 71 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 PRRC2AP48634 2157 aaKnown RBP6.75□□□□□ -1.33
USB1-216ENST00000624720 TRAV7A0A075B6U4 112 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 ZNF876PQ49A33 203 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 RMI2Q96E14 147 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 MTORP42345 2549 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 M0R381 172 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 UBE2BP63146 152 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 EIF4EBP1Q13541 118 aaPredicted RBP6.75□□□□□ -1.33
USB1-216ENST00000624720 LCA10Q71F78 164 aa6.75□□□□□ -1.33
USB1-216ENST00000624720 PHF5AQ7RTV0 110 aaKnown RBP6.75□□□□□ -1.33
USB1-216ENST00000624720 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
USB1-216ENST00000624720 C14orf178Q8N769 122 aaPredicted RBP6.74□□□□□ -1.33
USB1-216ENST00000624720 CCL19Q99731 98 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 J3QKU1 62 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 M0R3E3 92 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 DNAL4O96015 105 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 KRTAP10-9P60411 292 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 C11orf71Q6IPW1 123 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 BRD3OSQ6XYD6 125 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 FAM167A-AS1Q96KT0 104 aa6.74□□□□□ -1.33
USB1-216ENST00000624720 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
USB1-216ENST00000624720 ADAMTSL4-AS1Q5T5F5 129 aa6.73□□□□□ -1.33
USB1-216ENST00000624720 PRR25Q96S07 402 aa6.73□□□□□ -1.33
USB1-216ENST00000624720 ABCA2Q9BZC7 2435 aa6.73□□□□□ -1.33
USB1-216ENST00000624720 DSCAML1Q8TD84 2053 aa6.73□□□□□ -1.33
USB1-216ENST00000624720 RPL28P46779 137 aaKnown RBP6.73□□□□□ -1.33
USB1-216ENST00000624720 BLCAPP62952 87 aa6.73□□□□□ -1.33
USB1-216ENST00000624720 MUSTN1Q8IVN3 82 aa6.73□□□□□ -1.33
USB1-216ENST00000624720 FLNBO75369 2602 aaKnown RBP6.72□□□□□ -1.33
USB1-216ENST00000624720 NACAE9PAV3 2078 aa6.72□□□□□ -1.33
USB1-216ENST00000624720 ITPR2Q14571 2701 aa6.72□□□□□ -1.33
USB1-216ENST00000624720 LAGE3Q14657 143 aa6.72□□□□□ -1.33
USB1-216ENST00000624720 VMO1Q7Z5L0 202 aa6.72□□□□□ -1.33
USB1-216ENST00000624720 TET2Q6N021 2002 aaPredicted RBP6.72□□□□□ -1.33
USB1-216ENST00000624720 TMEM30BQ3MIR4 351 aa6.71□□□□□ -1.33
USB1-216ENST00000624720 OPRPNQ99935 248 aaPredicted RBP6.71□□□□□ -1.33
USB1-216ENST00000624720 MYO9AB2RTY4 2548 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 IGHV4-30-2A0A087WSY4 118 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 IGHV4-61A0A0C4DH41 118 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 BCE1O60756 84 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 LYZL1Q6UWQ5 148 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 IGHV3OR16-8A0A075B7F1 116 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 TRAV12-3A0A0B4J271 114 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 IGHV3-35A0A0C4DH35 117 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 Q1T7F1 81 aa6.71□□□□□ -1.34
USB1-216ENST00000624720 TEX15Q9BXT5 2789 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 UBR5O95071 2799 aaPredicted RBP6.7□□□□□ -1.34
USB1-216ENST00000624720 IGHV1-3A0A0C4DH29 117 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 BUB1B-PAK6H3BSN5 160 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 I3L3M4 83 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 KAAG1Q9UBP8 84 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 GCN1Q92616 2671 aaKnown RBP6.7□□□□□ -1.34
USB1-216ENST00000624720 APCP25054 2843 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 IGHV3-23P01764 117 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 LINC00846Q9NV44 126 aa6.7□□□□□ -1.34
USB1-216ENST00000624720 MIFP14174 115 aa6.69□□□□□ -1.34
USB1-216ENST00000624720 ZNF833PQ6ZTB9 187 aa6.69□□□□□ -1.34
USB1-216ENST00000624720 Q86TA4 180 aa6.69□□□□□ -1.34
USB1-216ENST00000624720 ZNF491Q8N8L2 437 aa6.69□□□□□ -1.34
USB1-216ENST00000624720 ZNF469Q96JG9 3925 aaPredicted RBP6.69□□□□□ -1.34
USB1-216ENST00000624720 LY6EQ16553 131 aa6.69□□□□□ -1.34
USB1-216ENST00000624720 M0R1W7 72 aa6.68□□□□□ -1.34
USB1-216ENST00000624720 BAALC-AS2P0C853 105 aa6.68□□□□□ -1.34
USB1-216ENST00000624720 WT1-ASQ06250 92 aa6.68□□□□□ -1.34
USB1-216ENST00000624720 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
USB1-216ENST00000624720 NKAPP1Q8N9T2 125 aa6.68□□□□□ -1.34
USB1-216ENST00000624720 DIRC1Q969H9 104 aa6.68□□□□□ -1.34
USB1-216ENST00000624720 SCGB3A1Q96QR1 104 aa6.68□□□□□ -1.34
USB1-216ENST00000624720 MRPL36Q9P0J6 103 aaKnown RBP6.68□□□□□ -1.34
USB1-216ENST00000624720 PSPHP1O15172 72 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 IGLV1-47P01700 117 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 TRBV12-3P01733 135 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 PRNTQ86SH4 94 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 FLNAP21333 2647 aaKnown RBP6.67□□□□□ -1.34
USB1-216ENST00000624720 IGLV2-18A0A075B6J9 118 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 DYNLRB2Q8TF09 96 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 TOMM6Q96B49 74 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 TMEM14BQ9NUH8 114 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 PHLDA3Q9Y5J5 127 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 COX7A2LO14548 114 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 LMO4P61968 165 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 ATP5EP2Q5VTU8 51 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 DPM3Q9P2X0 92 aa6.67□□□□□ -1.34
USB1-216ENST00000624720 ITPR3Q14573 2671 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 IGLV2-23P01705 113 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 TSPEAR-AS2P59090 65 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 SPTSSBQ8NFR3 76 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 IGKV1OR2-108A0A075B7D4 117 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 COX7A2P2O60397 106 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 GAS8-AS1O95177 125 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 COX8CQ7Z4L0 72 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 LINC01356Q8N9X3 169 aa6.66□□□□□ -1.34
USB1-216ENST00000624720 RNF223E7ERA6 249 aa6.65□□□□□ -1.34
USB1-216ENST00000624720 IGHV4-38-2P0DP08 117 aa6.65□□□□□ -1.34
USB1-216ENST00000624720 SYCNQ0VAF6 134 aa6.65□□□□□ -1.34
USB1-216ENST00000624720 Q6ZRP5 223 aa6.65□□□□□ -1.34
USB1-216ENST00000624720 RNF185Q96GF1 192 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms