RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 ELOF1P60002 83 aaKnown RBP1.82□□□□□ -2.12
BRCA1-229ENST00000621897 TPRXLQ17RH7 258 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 DEFB134Q4QY38 66 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 XAF1Q6GPH4 301 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 FAM223AQ8IWN6 122 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
BRCA1-229ENST00000621897 CDC42SE2Q9NRR3 84 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 MRPL36Q9P0J6 103 aaKnown RBP1.82□□□□□ -2.12
BRCA1-229ENST00000621897 CRCT1Q9UGL9 99 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 ESPL1Q14674 2120 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 ARFGEF3Q5TH69 2177 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 PRRC2BQ5JSZ5 2229 aaKnown RBP1.82□□□□□ -2.12
BRCA1-229ENST00000621897 C1orf167Q5SNV9 1468 aa1.82□□□□□ -2.12
BRCA1-229ENST00000621897 CEP192Q8TEP8 1941 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 EHBP1L1Q8N3D4 1523 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 ABCA6Q8N139 1617 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 CTTNBP2Q8WZ74 1663 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 UNC13CQ8NB66 2214 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 A0A0G2JQZ4 141 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 LOC101927531A0A1B0GV80 90 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 CLPSL1A2RUU4 121 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 C7orf77A4D0Y5 90 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 HIGD1CA8MV81 97 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 CHKB-CPT1BH3BT56 60 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 ZNF56Q15929 161 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 DYNLRB1Q9NP97 96 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 NDUFA4L2Q9NRX3 87 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 LENEPQ9Y5L5 61 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 SPTBP11277 2137 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 NEXMIFQ5QGS0 1516 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 ARHGEF5Q12774 1597 aa1.81□□□□□ -2.12
BRCA1-229ENST00000621897 WIZO95785 1651 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 DLEC1Q9Y238 1755 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 TRBV6-7A0A0A0MS04 114 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 TRBV6-8A0A0A6YYG3 113 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 LOC285095A0A1B0GVY8 99 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 HMGN2P05204 90 aaKnown RBP1.8□□□□□ -2.12
BRCA1-229ENST00000621897 SMIM13P0DJ93 91 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 DEFB121Q5J5C9 76 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 Q86TA4 180 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 SPACA4Q8TDM5 124 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 TVP23CQ96ET8 276 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 PLXNC1O60486 1568 aa1.8□□□□□ -2.12
BRCA1-229ENST00000621897 TRBV6-4A0A1B0GX49 114 aa1.79□□□□□ -2.12
BRCA1-229ENST00000621897 UMAD1C9J7I0 102 aa1.79□□□□□ -2.12
BRCA1-229ENST00000621897 PDE6GP18545 87 aa1.79□□□□□ -2.12
BRCA1-229ENST00000621897 FANCD2Q9BXW9 1451 aa1.79□□□□□ -2.12
BRCA1-229ENST00000621897 COL4A2P08572 1712 aa1.79□□□□□ -2.12
BRCA1-229ENST00000621897 GBF1Q92538 1859 aa1.79□□□□□ -2.12
BRCA1-229ENST00000621897 ABCA4P78363 2273 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 RTTNQ86VV8 2226 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 ABCC8Q09428 1581 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 ASXL1Q8IXJ9 1541 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 A0A087WXM4 84 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 F8WEM9 126 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 HMGN4O00479 90 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 SAA2P0DJI9 122 aaPredicted RBP1.78□□□□□ -2.12
BRCA1-229ENST00000621897 SSBP1Q04837 148 aaKnown RBP1.78□□□□□ -2.12
BRCA1-229ENST00000621897 C10orf55Q5SWW7 151 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 DEFB132Q7Z7B7 95 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 AMELXQ99217 191 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 TMEM14BQ9NUH8 114 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 V9GYH0 126 aa1.78□□□□□ -2.12
BRCA1-229ENST00000621897 ARFGEF1Q9Y6D6 1849 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 LOC285556D6RIA3 1793 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 SCN7AQ01118 1682 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 PLCH1Q4KWH8 1693 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 CFAP43Q8NDM7 1665 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 RNF17Q9BXT8 1623 aaKnown RBP1.77□□□□□ -2.13
BRCA1-229ENST00000621897 IGLV3-32A0A0A0MS00 114 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 MYMXA0A1B0GTQ4 84 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 ZNF815PA8K554 130 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 JMJD7-PLA2G4BH0Y9G9 81 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 IGLV3-1P01715 115 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 RNASE3P12724 160 aaKnown RBP1.77□□□□□ -2.13
BRCA1-229ENST00000621897 CCL3L1P16619 93 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 PSMG4Q5JS54 123 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 C20orf197Q8N268 126 aa1.77□□□□□ -2.13
BRCA1-229ENST00000621897 TET1Q8NFU7 2136 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 IQCF6A8MYZ5 107 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 PPYP01298 95 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 SFTA3P0C7M3 94 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 XRN1Q8IZH2 1706 aaKnown RBP1.76□□□□□ -2.13
BRCA1-229ENST00000621897 RREB1Q92766 1687 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 MYO7BQ6PIF6 2116 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 MROH2BQ7Z745 1585 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 ANKRD36A6QL64 1941 aa1.76□□□□□ -2.13
BRCA1-229ENST00000621897 A0A1B0GUL6 1792 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 SIPA1L3O60292 1781 aaPredicted RBP1.75□□□□□ -2.13
BRCA1-229ENST00000621897 ITSN2Q9NZM3 1697 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 A0A1W2PNN7 141 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 FAM223BA6NKX1 122 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 C10orf142B7Z368 130 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 IGLV6-57P01721 117 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 PLGLAQ15195 96 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 SFTA2Q6UW10 78 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 PIK3C2BO00750 1634 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 MYO7AQ13402 2215 aa1.75□□□□□ -2.13
BRCA1-229ENST00000621897 TOP2AP11388 1531 aaKnown RBP1.75□□□□□ -2.13
BRCA1-229ENST00000621897 ZMYM4Q5VZL5 1548 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms