RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 I3L3M4 83 aa13.04□□□□□ -0.32
SEMA6C-210ENST00000621728 PTTG1IPP53801 180 aa13.04□□□□□ -0.32
SEMA6C-210ENST00000621728 RPL36AP83881 106 aaKnown RBP13.04□□□□□ -0.32
SEMA6C-210ENST00000621728 ZC2HC1BQ5TFG8 222 aa13.04□□□□□ -0.32
SEMA6C-210ENST00000621728 RPL36ALQ969Q0 106 aaKnown RBP13.04□□□□□ -0.32
SEMA6C-210ENST00000621728 C2orf66Q6UXQ4 117 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 KIR2DL4Q99706 377 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 TEX48A0A1B0GUV7 120 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 UBE2D3P61077 147 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 UBE2D2P62837 147 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 VSIG2Q96IQ7 327 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 PRADC1Q9BSG0 188 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 PRO0255Q9UI72 69 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 CYSLTR1Q9Y271 337 aa13.03□□□□□ -0.32
SEMA6C-210ENST00000621728 H3BRM9 83 aa13.02□□□□□ -0.32
SEMA6C-210ENST00000621728 GYPEP15421 78 aa13.02□□□□□ -0.32
SEMA6C-210ENST00000621728 PCP2Q8IVA1 136 aa13.02□□□□□ -0.32
SEMA6C-210ENST00000621728 PAPPA-AS1Q5QFB9 102 aa13.01□□□□□ -0.33
SEMA6C-210ENST00000621728 C11orf45Q8TAV5 145 aa13.01□□□□□ -0.33
SEMA6C-210ENST00000621728 TRAV26-1A0A087WT03 109 aa13.01□□□□□ -0.33
SEMA6C-210ENST00000621728 PAX4O43316 350 aa13.01□□□□□ -0.33
SEMA6C-210ENST00000621728 VAMP3Q15836 100 aa13.01□□□□□ -0.33
SEMA6C-210ENST00000621728 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
SEMA6C-210ENST00000621728 RPL39P62891 51 aaKnown RBP13□□□□□ -0.33
SEMA6C-210ENST00000621728 TAL2Q16559 108 aa13□□□□□ -0.33
SEMA6C-210ENST00000621728 A0A096LPF7 62 aa13□□□□□ -0.33
SEMA6C-210ENST00000621728 LINC00694P0DN24 101 aa13□□□□□ -0.33
SEMA6C-210ENST00000621728 CCL25O15444 150 aa12.99□□□□□ -0.33
SEMA6C-210ENST00000621728 BAALCQ8WXS3 180 aa12.99□□□□□ -0.33
SEMA6C-210ENST00000621728 TIMM17AQ99595 171 aa12.99□□□□□ -0.33
SEMA6C-210ENST00000621728 IGKV2D-26A0A0A0MRZ7 120 aa12.98□□□□□ -0.33
SEMA6C-210ENST00000621728 NTM-AS1Q6ZSK4 140 aa12.98□□□□□ -0.33
SEMA6C-210ENST00000621728 STAB2Q8WWQ8 2551 aa12.97□□□□□ -0.33
SEMA6C-210ENST00000621728 CHCHD7Q9BUK0 85 aa12.97□□□□□ -0.33
SEMA6C-210ENST00000621728 TRBV25-1A0A075B6N4 114 aa12.96□□□□□ -0.33
SEMA6C-210ENST00000621728 Q6ZVH6 145 aa12.96□□□□□ -0.33
SEMA6C-210ENST00000621728 DAZ4Q86SG3 579 aaKnown RBP12.96□□□□□ -0.33
SEMA6C-210ENST00000621728 CHAC1Q9BUX1 264 aa12.96□□□□□ -0.33
SEMA6C-210ENST00000621728 DAZ3Q9NR90 486 aaKnown RBP12.96□□□□□ -0.33
SEMA6C-210ENST00000621728 C9orf118A6NHY6 69 aa12.96□□□□□ -0.34
SEMA6C-210ENST00000621728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.95□□□□□ -0.34
SEMA6C-210ENST00000621728 IGKV2-29A2NJV5 120 aaPredicted RBP12.95□□□□□ -0.34
SEMA6C-210ENST00000621728 PRSS29PA6NIE9 313 aa12.95□□□□□ -0.34
SEMA6C-210ENST00000621728 IGIPA6NJ69 53 aa12.95□□□□□ -0.34
SEMA6C-210ENST00000621728 TM2D2Q9BX73 214 aa12.95□□□□□ -0.34
SEMA6C-210ENST00000621728 C20orf203Q8NBC4 194 aa12.94□□□□□ -0.34
SEMA6C-210ENST00000621728 DEFB131BA0A096LNP1 70 aa12.94□□□□□ -0.34
SEMA6C-210ENST00000621728 E9PLD3 99 aa12.94□□□□□ -0.34
SEMA6C-210ENST00000621728 PMVKQ15126 192 aa12.94□□□□□ -0.34
SEMA6C-210ENST00000621728 ATP6V0E2Q8NHE4 81 aa12.93□□□□□ -0.34
SEMA6C-210ENST00000621728 TCTAP57738 103 aa12.92□□□□□ -0.34
SEMA6C-210ENST00000621728 CEMP1Q6PRD7 247 aaPredicted RBP12.92□□□□□ -0.34
SEMA6C-210ENST00000621728 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
SEMA6C-210ENST00000621728 GTF2H5Q6ZYL4 71 aa12.92□□□□□ -0.34
SEMA6C-210ENST00000621728 OPRPNQ99935 248 aaPredicted RBP12.92□□□□□ -0.34
SEMA6C-210ENST00000621728 HERVK_113P61574 105 aa12.91□□□□□ -0.34
SEMA6C-210ENST00000621728 AMMECR1LQ6DCA0 310 aa12.91□□□□□ -0.34
SEMA6C-210ENST00000621728 CEND1Q8N111 149 aa12.91□□□□□ -0.34
SEMA6C-210ENST00000621728 MYMXA0A1B0GTQ4 84 aa12.9□□□□□ -0.34
SEMA6C-210ENST00000621728 TRAV8-6A0A0B4J262 113 aa12.9□□□□□ -0.35
SEMA6C-210ENST00000621728 TMEM238C9JI98 176 aa12.9□□□□□ -0.35
SEMA6C-210ENST00000621728 FBN3Q75N90 2809 aa12.89□□□□□ -0.35
SEMA6C-210ENST00000621728 NHLRC4P0CG21 123 aaPredicted RBP12.89□□□□□ -0.35
SEMA6C-210ENST00000621728 GCSHP23434 173 aa12.89□□□□□ -0.35
SEMA6C-210ENST00000621728 GTSF1LQ9H1H1 148 aa12.89□□□□□ -0.35
SEMA6C-210ENST00000621728 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
SEMA6C-210ENST00000621728 ICOSQ9Y6W8 199 aa12.89□□□□□ -0.35
SEMA6C-210ENST00000621728 TRBV6-8A0A0A6YYG3 113 aa12.88□□□□□ -0.35
SEMA6C-210ENST00000621728 MRPL23Q16540 153 aaKnown RBP12.88□□□□□ -0.35
SEMA6C-210ENST00000621728 MAPKAPK5-AS1Q8N8E1 139 aa12.88□□□□□ -0.35
SEMA6C-210ENST00000621728 TRAV10A0A0B4J240 114 aa12.87□□□□□ -0.35
SEMA6C-210ENST00000621728 C11orf86A6NJI1 115 aa12.87□□□□□ -0.35
SEMA6C-210ENST00000621728 FAM104AQ969W3 186 aa12.87□□□□□ -0.35
SEMA6C-210ENST00000621728 VPS25Q9BRG1 176 aa12.87□□□□□ -0.35
SEMA6C-210ENST00000621728 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
SEMA6C-210ENST00000621728 GAGE10A6NGK3 116 aa12.86□□□□□ -0.35
SEMA6C-210ENST00000621728 TMEM243Q9BU79 118 aa12.86□□□□□ -0.35
SEMA6C-210ENST00000621728 TTTY13Q9BZ97 58 aa12.86□□□□□ -0.35
SEMA6C-210ENST00000621728 UBE2D4Q9Y2X8 147 aa12.86□□□□□ -0.35
SEMA6C-210ENST00000621728 FXYD2P54710 66 aa12.86□□□□□ -0.35
SEMA6C-210ENST00000621728 RNASE13Q5GAN3 156 aaKnown RBP12.86□□□□□ -0.35
SEMA6C-210ENST00000621728 GAGE6Q13070 117 aa12.85□□□□□ -0.35
SEMA6C-210ENST00000621728 NFE4Q86UQ8 179 aa12.85□□□□□ -0.35
SEMA6C-210ENST00000621728 OR5A1Q8NGJ0 315 aa12.85□□□□□ -0.35
SEMA6C-210ENST00000621728 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
SEMA6C-210ENST00000621728 IGLV4-3A0A075B6K6 122 aa12.84□□□□□ -0.35
SEMA6C-210ENST00000621728 K7EP34 96 aa12.84□□□□□ -0.35
SEMA6C-210ENST00000621728 RNF151Q2KHN1 245 aa12.84□□□□□ -0.35
SEMA6C-210ENST00000621728 A0A1W2PPM0 123 aa12.84□□□□□ -0.35
SEMA6C-210ENST00000621728 H3BUT2 72 aa12.84□□□□□ -0.35
SEMA6C-210ENST00000621728 HIST1H4GQ99525 98 aa12.84□□□□□ -0.35
SEMA6C-210ENST00000621728 CHCHD5Q9BSY4 110 aa12.84□□□□□ -0.35
SEMA6C-210ENST00000621728 H3BNG1 76 aa12.83□□□□□ -0.36
SEMA6C-210ENST00000621728 FABP2P12104 132 aa12.83□□□□□ -0.36
SEMA6C-210ENST00000621728 Q6ZUT4 128 aa12.83□□□□□ -0.36
SEMA6C-210ENST00000621728 UBE2L6O14933 153 aa12.82□□□□□ -0.36
SEMA6C-210ENST00000621728 ZNF815PA8K554 130 aa12.81□□□□□ -0.36
SEMA6C-210ENST00000621728 K7ERU9 68 aa12.81□□□□□ -0.36
SEMA6C-210ENST00000621728 LYPD5Q6UWN5 251 aa12.81□□□□□ -0.36
SEMA6C-210ENST00000621728 A0A1B0GWB2 263 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms