RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 SLURP1P55000 103 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 HAMPP81172 84 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 C5orf56Q8N8D9 126 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 ATP6V0E2Q8NHE4 81 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 LENEPQ9Y5L5 61 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 FBN2P35556 2912 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 P0DMU3 169 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 FAM231AP0DMU4 169 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 FAM231CP0DMU5 169 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 SS18Q15532 418 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 EIF4EBP3O60516 100 aaPredicted RBP5.18□□□□□ -1.58
NEDD9-216ENST00000620854 NOP10Q9NPE3 64 aaKnown RBP5.18□□□□□ -1.58
NEDD9-216ENST00000620854 IGHV3-33P01772 117 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 INAFM2P0DMQ5 153 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 SMIM20Q8N5G0 67 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 CLEC2BQ92478 149 aa5.18□□□□□ -1.58
NEDD9-216ENST00000620854 F5H768 121 aa5.17□□□□□ -1.58
NEDD9-216ENST00000620854 SOCS3O14543 225 aa5.17□□□□□ -1.58
NEDD9-216ENST00000620854 XCL1P47992 114 aa5.17□□□□□ -1.58
NEDD9-216ENST00000620854 EBI3Q14213 229 aa5.17□□□□□ -1.58
NEDD9-216ENST00000620854 POLR2KP53803 58 aaKnown RBP5.17□□□□□ -1.58
NEDD9-216ENST00000620854 IGHV4-31P0DP07 118 aa5.17□□□□□ -1.58
NEDD9-216ENST00000620854 PROK1P58294 105 aa5.17□□□□□ -1.58
NEDD9-216ENST00000620854 LINC00315P59091 139 aa5.17□□□□□ -1.58
NEDD9-216ENST00000620854 CMC4P56277 68 aaPredicted RBP5.16□□□□□ -1.58
NEDD9-216ENST00000620854 RHOHQ15669 191 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 LINC01620Q4KN68 170 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 ESM1Q9NQ30 184 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 NF1P21359 2839 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 BAALC-AS2P0C853 105 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 NHLRC4P0CG21 123 aaPredicted RBP5.16□□□□□ -1.58
NEDD9-216ENST00000620854 NDUFV3P56181 108 aaKnown RBP5.16□□□□□ -1.58
NEDD9-216ENST00000620854 DNAJC30Q96LL9 226 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 Q9UF83 564 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 CHD6Q8TD26 2715 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 TRIAP1O43715 76 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 IGHG2P01859 326 aa5.16□□□□□ -1.58
NEDD9-216ENST00000620854 ANGP03950 147 aaKnown RBP5.15□□□□□ -1.58
NEDD9-216ENST00000620854 HERVK_113P63121 156 aa5.15□□□□□ -1.58
NEDD9-216ENST00000620854 NIPBLQ6KC79 2804 aaeCLIP5.15□□□□□ -1.58
NEDD9-216ENST00000620854 IGLV10-54A0A075B6I4 117 aa5.15□□□□□ -1.58
NEDD9-216ENST00000620854 TMEM263Q8WUH6 116 aaKnown RBP5.15□□□□□ -1.58
NEDD9-216ENST00000620854 AMELXQ99217 191 aa5.15□□□□□ -1.58
NEDD9-216ENST00000620854 KIF25-AS1Q9Y6Z4 181 aa5.15□□□□□ -1.58
NEDD9-216ENST00000620854 HECTD1Q9ULT8 2610 aa5.15□□□□□ -1.59
NEDD9-216ENST00000620854 A6NDX4 124 aa5.15□□□□□ -1.59
NEDD9-216ENST00000620854 ZNF22P17026 224 aaPredicted RBP5.15□□□□□ -1.59
NEDD9-216ENST00000620854 KRTAP10-9P60411 292 aa5.15□□□□□ -1.59
NEDD9-216ENST00000620854 ADAMTSL4-AS1Q5T5F5 129 aa5.15□□□□□ -1.59
NEDD9-216ENST00000620854 SVIPQ8NHG7 77 aa5.15□□□□□ -1.59
NEDD9-216ENST00000620854 IGHV3-30-3P0DP02 117 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 C10orf99Q6UWK7 81 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 IGHV4OR15-8A0A075B7B6 117 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 A0A087WW49 117 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 A0A0J9YXY3 114 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 GHRHP01286 108 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 MXRA5Q9NR99 2828 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 TRAV25A0A0B4J276 109 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 IGKV3D-7A0A0C4DH55 119 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 HERV-K104P63124 156 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 TIMM17AQ99595 171 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 ICOSQ9Y6W8 199 aa5.14□□□□□ -1.59
NEDD9-216ENST00000620854 TMEM223A0PJW6 202 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 DAD1P61803 113 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 OVOL2Q9BRP0 275 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 M0QY20 66 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 UBL5Q9BZL1 73 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 HIST2H2BDQ6DRA6 164 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 TRBV27A0A0K0K1C4 114 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 FAM236AA0A1B0GUQ0 79 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 FAM236BA0A1B0GV22 79 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 TMEM61Q8N0U2 210 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 C20orf203Q8NBC4 194 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 ODF3Q96PU9 254 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 CITED1Q99966 193 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 SND1-IT1Q9HBX3 110 aa5.13□□□□□ -1.59
NEDD9-216ENST00000620854 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 ZNF561-AS1K7EIQ3 104 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 SHISA2Q6UWI4 295 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 SPANXA1Q9NS26 97 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 H7C423 109 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 CCL24O00175 119 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 SBSPONQ8IVN8 264 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 NBEAL2Q6ZNJ1 2754 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 DNAJC9-AS1A6NH13 148 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 DEFB121Q5J5C9 76 aa5.12□□□□□ -1.59
NEDD9-216ENST00000620854 Q6YL49 198 aa5.11□□□□□ -1.59
NEDD9-216ENST00000620854 TEX15Q9BXT5 2789 aa5.11□□□□□ -1.59
NEDD9-216ENST00000620854 TRBV10-2A0A0K0K1G8 114 aa5.11□□□□□ -1.59
NEDD9-216ENST00000620854 TMEM126AQ9H061 195 aa5.11□□□□□ -1.59
NEDD9-216ENST00000620854 Q9HAA7 133 aa5.11□□□□□ -1.59
NEDD9-216ENST00000620854 TMEM89A2RUT3 159 aa5.11□□□□□ -1.59
NEDD9-216ENST00000620854 A0A0J9YX75 114 aa5.1□□□□□ -1.59
NEDD9-216ENST00000620854 KLLNB2CW77 178 aa5.1□□□□□ -1.59
NEDD9-216ENST00000620854 DEFB4AO15263 64 aa5.1□□□□□ -1.59
NEDD9-216ENST00000620854 POM121L12Q8N7R1 296 aa5.1□□□□□ -1.59
NEDD9-216ENST00000620854 A0A0B4J2C4 111 aa5.1□□□□□ -1.59
NEDD9-216ENST00000620854 LGALS9O00182 355 aa5.1□□□□□ -1.59
NEDD9-216ENST00000620854 VSIG2Q96IQ7 327 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms