RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 SPTA1P02549 2419 aa6.17□□□□□ -1.42
ALMS1-208ENST00000620466 C9orf85Q96MD7 179 aa6.17□□□□□ -1.42
ALMS1-208ENST00000620466 A8MZ25 164 aa6.17□□□□□ -1.42
ALMS1-208ENST00000620466 M0R2N4 97 aa6.17□□□□□ -1.42
ALMS1-208ENST00000620466 IGLV1-40P01703 118 aa6.17□□□□□ -1.42
ALMS1-208ENST00000620466 DEFB114Q30KQ6 69 aa6.17□□□□□ -1.42
ALMS1-208ENST00000620466 A0A096LNI7 61 aa6.16□□□□□ -1.42
ALMS1-208ENST00000620466 POLR2KP53803 58 aaKnown RBP6.16□□□□□ -1.42
ALMS1-208ENST00000620466 DCANP1Q8TF63 244 aa6.16□□□□□ -1.42
ALMS1-208ENST00000620466 TRBV30A0A0K0K1B3 111 aa6.16□□□□□ -1.42
ALMS1-208ENST00000620466 COX8CQ7Z4L0 72 aa6.16□□□□□ -1.42
ALMS1-208ENST00000620466 HRCT1Q6UXD1 115 aa6.15□□□□□ -1.42
ALMS1-208ENST00000620466 ZNF702PQ9H963 129 aa6.15□□□□□ -1.42
ALMS1-208ENST00000620466 PYGO1Q9Y3Y4 419 aa6.15□□□□□ -1.42
ALMS1-208ENST00000620466 IGLV2-18A0A075B6J9 118 aa6.15□□□□□ -1.42
ALMS1-208ENST00000620466 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
ALMS1-208ENST00000620466 C18orf65Q6ZTR6 163 aa6.15□□□□□ -1.43
ALMS1-208ENST00000620466 LINC00308Q8TCZ7 52 aa6.15□□□□□ -1.43
ALMS1-208ENST00000620466 TRAV10A0A0B4J240 114 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 BPY2O14599 106 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 LY6G6CO95867 125 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 MIFP14174 115 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 IGIPA6NJ69 53 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 PRM2P04554 102 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 NDUFV3P56181 108 aaKnown RBP6.14□□□□□ -1.43
ALMS1-208ENST00000620466 UBE2D4Q9Y2X8 147 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 COL6A6A6NMZ7 2263 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 IGLV4-69A0A075B6H9 119 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 WFDC10BQ8IUB3 73 aa6.14□□□□□ -1.43
ALMS1-208ENST00000620466 PDE6GP18545 87 aa6.13□□□□□ -1.43
ALMS1-208ENST00000620466 Q6ZSV7 163 aa6.13□□□□□ -1.43
ALMS1-208ENST00000620466 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.13□□□□□ -1.43
ALMS1-208ENST00000620466 DNAH12Q6ZR08 3092 aa6.13□□□□□ -1.43
ALMS1-208ENST00000620466 J3KT08 172 aa6.13□□□□□ -1.43
ALMS1-208ENST00000620466 TRAV23DV6A0A075B6W5 121 aa6.13□□□□□ -1.43
ALMS1-208ENST00000620466 PIK3CD-AS1Q5SR53 167 aa6.13□□□□□ -1.43
ALMS1-208ENST00000620466 SLPIP03973 132 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 SCXQ7RTU7 201 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 SPTSSBQ8NFR3 76 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 PCSK5Q92824 1860 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 ACACAQ13085 2346 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 LINC00643Q86TS7 51 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 ZNF706Q9Y5V0 76 aaPredicted RBP6.12□□□□□ -1.43
ALMS1-208ENST00000620466 UTRNP46939 3433 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 DSCAMO60469 2012 aa6.12□□□□□ -1.43
ALMS1-208ENST00000620466 WNK2Q9Y3S1 2297 aa6.11□□□□□ -1.43
ALMS1-208ENST00000620466 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
ALMS1-208ENST00000620466 TRBV6-8A0A0A6YYG3 113 aa6.11□□□□□ -1.43
ALMS1-208ENST00000620466 USP17L23D6RBM5 183 aa6.11□□□□□ -1.43
ALMS1-208ENST00000620466 TIMM17BO60830 172 aa6.11□□□□□ -1.43
ALMS1-208ENST00000620466 TSPEAR-AS2P59090 65 aa6.11□□□□□ -1.43
ALMS1-208ENST00000620466 UBE2D3P61077 147 aa6.11□□□□□ -1.43
ALMS1-208ENST00000620466 BBC3Q96PG8 261 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-208ENST00000620466 TET2Q6N021 2002 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-208ENST00000620466 CRIP2P52943 208 aaPredicted RBP6.11□□□□□ -1.43
ALMS1-208ENST00000620466 PRR14LQ5THK1 2151 aa6.1□□□□□ -1.43
ALMS1-208ENST00000620466 A0A0J9YWU9 116 aa6.1□□□□□ -1.43
ALMS1-208ENST00000620466 AVPP01185 164 aa6.1□□□□□ -1.43
ALMS1-208ENST00000620466 PCNX1Q96RV3 2341 aa6.1□□□□□ -1.43
ALMS1-208ENST00000620466 ZNF318Q5VUA4 2279 aa6.1□□□□□ -1.43
ALMS1-208ENST00000620466 MRPS36P82909 103 aaKnown RBP6.1□□□□□ -1.43
ALMS1-208ENST00000620466 PPDPFQ9H3Y8 114 aa6.1□□□□□ -1.43
ALMS1-208ENST00000620466 IGKV2-28A0A075B6P5 120 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 IGKV2D-28P01615 120 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 XGP55808 180 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 SDIM1Q6ZPB5 146 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 GVINP1Q7Z2Y8 2422 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 TNCP24821 2201 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 ARFGEF3Q5TH69 2177 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 LINC01546A6NGU7 62 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 A0A1W2PPR1 153 aa6.09□□□□□ -1.43
ALMS1-208ENST00000620466 IGLV9-49A0A0B4J1Y8 123 aa6.09□□□□□ -1.44
ALMS1-208ENST00000620466 PLA2G2AP14555 144 aa6.09□□□□□ -1.44
ALMS1-208ENST00000620466 LOC100131303A0A0U1RQF7 123 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 MPLKIPQ8TAP9 179 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 LST1O00453 97 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 SYCNQ0VAF6 134 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 TRBV6-4A0A1B0GX49 114 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 XAGE1AQ9HD64 81 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 LOC107984640A0A0U1RRK4 108 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 ENHOQ6UWT2 76 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 PLAC8L1A1L4L8 177 aa6.08□□□□□ -1.44
ALMS1-208ENST00000620466 NANOS2P60321 138 aaKnown RBP6.08□□□□□ -1.44
ALMS1-208ENST00000620466 IBA57-AS1B1ANH7 110 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 KPRPQ5T749 579 aaPredicted RBP6.07□□□□□ -1.44
ALMS1-208ENST00000620466 WFDC10AQ9H1F0 79 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 RPL37AP8A6NKH3 93 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 SPINK6Q6UWN8 80 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 POM121L12Q8N7R1 296 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 M0QXV9 152 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 CHCHD7Q9BUK0 85 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 SPTBN2O15020 2390 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 FAM240AA0A1B0GVK7 77 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 C3orf84H3BNL1 204 aa6.07□□□□□ -1.44
ALMS1-208ENST00000620466 OXLD1Q5BKU9 147 aa6.06□□□□□ -1.44
ALMS1-208ENST00000620466 C1orf158Q8N1D5 194 aa6.06□□□□□ -1.44
ALMS1-208ENST00000620466 APC2O95996 2303 aa6.06□□□□□ -1.44
ALMS1-208ENST00000620466 UBE2D2P62837 147 aa6.06□□□□□ -1.44
ALMS1-208ENST00000620466 ZNF580Q9UK33 172 aa6.06□□□□□ -1.44
ALMS1-208ENST00000620466 PLXNB1O43157 2135 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms