RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 SMAGPQ0VAQ4 97 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 GAGE6Q13070 117 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 ERASQ7Z444 233 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 MRPL52Q86TS9 123 aaKnown RBP5.5□□□□□ -1.53
CPNE3-209ENST00000620393 SCGB3A1Q96QR1 104 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 TIMM21Q9BVV7 248 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 LINC00588Q9Y4M8 146 aa5.5□□□□□ -1.53
CPNE3-209ENST00000620393 CSDC2Q9Y534 153 aaKnown RBP5.5□□□□□ -1.53
CPNE3-209ENST00000620393 A0A1B0GUV1 79 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 IFITM10A6NMD0 228 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 C3orf84H3BNL1 204 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 ATP5LO75964 103 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 FGF6P10767 208 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 FABP4P15090 132 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 PKIAP61925 76 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 TMEM141Q96I45 108 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 TIMM17AQ99595 171 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 HIST1H2BLQ99880 126 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 SPANXA1Q9NS26 97 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 HSPB8Q9UJY1 196 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 UBE2D4Q9Y2X8 147 aa5.49□□□□□ -1.53
CPNE3-209ENST00000620393 MRPS16Q9Y3D3 137 aaKnown RBP5.49□□□□□ -1.53
CPNE3-209ENST00000620393 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-209ENST00000620393 NPSP0C0P6 89 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 ZNF25P17030 456 aaPredicted RBP5.48□□□□□ -1.53
CPNE3-209ENST00000620393 RBX1P62877 108 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 MRPS36P82909 103 aaKnown RBP5.48□□□□□ -1.53
CPNE3-209ENST00000620393 AMMECR1LQ6DCA0 310 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 DGAT2L7PQ6IED9 249 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 LINC00173Q6ZV60 143 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 FAM104AQ969W3 186 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 IFI27L1Q96BM0 104 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 UPK3BQ9BT76 320 aa5.48□□□□□ -1.53
CPNE3-209ENST00000620393 A0A087WX48 190 aa5.47□□□□□ -1.53
CPNE3-209ENST00000620393 CASC10Q5T4H9 136 aa5.47□□□□□ -1.53
CPNE3-209ENST00000620393 ZNF664Q8N3J9 261 aa5.47□□□□□ -1.53
CPNE3-209ENST00000620393 OR5A1Q8NGJ0 315 aa5.47□□□□□ -1.53
CPNE3-209ENST00000620393 TMEM101Q96IK0 257 aa5.47□□□□□ -1.53
CPNE3-209ENST00000620393 OPRPNQ99935 248 aaPredicted RBP5.47□□□□□ -1.53
CPNE3-209ENST00000620393 CDC42SE2Q9NRR3 84 aa5.47□□□□□ -1.53
CPNE3-209ENST00000620393 TGP01266 2768 aa5.46□□□□□ -1.53
CPNE3-209ENST00000620393 IGLV4-60A0A075B6I1 120 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 IGLV4-3A0A075B6K6 122 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 PRSS1P07477 247 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 DNAH10OSP0CZ25 163 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 MPV17L2Q567V2 206 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 LINC01556Q5JQF7 62 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 PAPPA-AS1Q5QFB9 102 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 Q6ZN92 141 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 WFDC10BQ8IUB3 73 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 Q8N976 141 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 AMELXQ99217 191 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 MAP1LC3CQ9BXW4 147 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 VCX2Q9H322 139 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 Q9H8V8 135 aa5.46□□□□□ -1.54
CPNE3-209ENST00000620393 PLECQ15149 4684 aaKnown RBP5.45□□□□□ -1.54
CPNE3-209ENST00000620393 PRSS29PA6NIE9 313 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 SYS1-DBNDD2H3BUS1 97 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 SIVA1O15304 175 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 C3orf79P0CE67 100 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 PMVKQ15126 192 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 SPATA12Q7Z6I5 190 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 UBE2DNLQ8IWF7 75 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 OR10D4PQ8NGN7 298 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 BAALCQ8WXS3 180 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 CST9LQ9H4G1 147 aa5.45□□□□□ -1.54
CPNE3-209ENST00000620393 TRAV12-1A0A0B4J245 112 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 IGHV3-30P01768 117 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 IGHV3-33P01772 117 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 IGHV3-30-3P0DP02 117 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 IGHV3-30-5P0DP03 117 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 KRTDAPP60985 99 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 ZC2HC1BQ5TFG8 222 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 LGALS9CQ6DKI2 356 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 PET117Q6UWS5 81 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 TEX43Q6ZNM6 134 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 Q6ZUT4 128 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 STARD9Q9P2P6 4700 aa5.44□□□□□ -1.54
CPNE3-209ENST00000620393 CSMD3Q7Z407 3707 aa5.43□□□□□ -1.54
CPNE3-209ENST00000620393 TRAV9-2A0A087WT02 112 aa5.43□□□□□ -1.54
CPNE3-209ENST00000620393 LOC105371267A0A1B0GV96 52 aa5.43□□□□□ -1.54
CPNE3-209ENST00000620393 K7EP13 123 aa5.43□□□□□ -1.54
CPNE3-209ENST00000620393 ANGP03950 147 aaKnown RBP5.43□□□□□ -1.54
CPNE3-209ENST00000620393 RNASE13Q5GAN3 156 aaKnown RBP5.43□□□□□ -1.54
CPNE3-209ENST00000620393 LINC00269Q8N2A0 174 aa5.43□□□□□ -1.54
CPNE3-209ENST00000620393 PRR34Q9NV39 138 aa5.43□□□□□ -1.54
CPNE3-209ENST00000620393 KLK12Q9UKR0 248 aa5.43□□□□□ -1.54
CPNE3-209ENST00000620393 IBA57-AS1B1ANH7 110 aa5.42□□□□□ -1.54
CPNE3-209ENST00000620393 CCL25O15444 150 aa5.42□□□□□ -1.54
CPNE3-209ENST00000620393 REG3AQ06141 175 aa5.42□□□□□ -1.54
CPNE3-209ENST00000620393 ENHOQ6UWT2 76 aa5.42□□□□□ -1.54
CPNE3-209ENST00000620393 C2orf88Q9BSF0 95 aa5.42□□□□□ -1.54
CPNE3-209ENST00000620393 CHTOPQ9Y3Y2 248 aaKnown RBP5.42□□□□□ -1.54
CPNE3-209ENST00000620393 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.42□□□□□ -1.54
CPNE3-209ENST00000620393 TRAV13-1A0A0B4J241 112 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 LINC00959A0A1B0GUT2 108 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 H0Y8G0 127 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 UBE2D1P51668 147 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 ODF1Q14990 250 aa5.41□□□□□ -1.54
CPNE3-209ENST00000620393 LINC01545Q5VT33 79 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 133.7 ms