RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 IGHV3-30-3P0DP02 117 aa11.67□□□□□ -0.54
SEMA3B-214ENST00000619119 HIST1H4AP62805 103 aaKnown RBP11.67□□□□□ -0.54
SEMA3B-214ENST00000619119 DEFB113Q30KQ7 82 aa11.67□□□□□ -0.54
SEMA3B-214ENST00000619119 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
SEMA3B-214ENST00000619119 RPL35AP18077 110 aaKnown RBP11.67□□□□□ -0.54
SEMA3B-214ENST00000619119 TMEM61Q8N0U2 210 aa11.67□□□□□ -0.54
SEMA3B-214ENST00000619119 Q96MF0 132 aa11.67□□□□□ -0.54
SEMA3B-214ENST00000619119 TIRAPP58753 221 aa11.66□□□□□ -0.54
SEMA3B-214ENST00000619119 SERP2Q8N6R1 65 aa11.66□□□□□ -0.54
SEMA3B-214ENST00000619119 ITPR3Q14573 2671 aa11.66□□□□□ -0.54
SEMA3B-214ENST00000619119 PFN2P35080 140 aa11.66□□□□□ -0.54
SEMA3B-214ENST00000619119 IGHG2P01859 326 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 SYNJ2BPP57105 145 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 LINC00336Q6ZUF6 198 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 ACANP16112 2415 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 A0A087WWL8 130 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 A8MZ25 164 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 PPP1R17O96001 155 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 MALP21145 153 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 UPK3BQ9BT76 320 aa11.65□□□□□ -0.54
SEMA3B-214ENST00000619119 TINCRA0A1B0GVN0 87 aa11.65□□□□□ -0.55
SEMA3B-214ENST00000619119 CLPSL1A2RUU4 121 aa11.65□□□□□ -0.55
SEMA3B-214ENST00000619119 GNRH2O43555 120 aa11.65□□□□□ -0.55
SEMA3B-214ENST00000619119 BUB3O43684 328 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 FLNAP21333 2647 aaKnown RBP11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 A0A1W2PRX2 142 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 VCYO14598 125 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 IGHV4-31P0DP07 118 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 DEFB1P60022 68 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 C19orf54Q5BKX5 351 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 C10orf99Q6UWK7 81 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 PRO0628Q9UI54 55 aa11.64□□□□□ -0.55
SEMA3B-214ENST00000619119 A0A0J9YX75 114 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 MIAQ16674 131 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 UNQ9165/PRO28630Q6UXU0 137 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 NDUFA12Q9UI09 145 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 ITPR2Q14571 2701 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 NXPH4O95158 308 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 BAALC-AS2P0C853 105 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 POLR2KP53803 58 aaKnown RBP11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
SEMA3B-214ENST00000619119 CR1P17927 2039 aa11.62□□□□□ -0.55
SEMA3B-214ENST00000619119 IGKV3-7A0A075B6H7 116 aa11.62□□□□□ -0.55
SEMA3B-214ENST00000619119 FAM223BA6NKX1 122 aa11.62□□□□□ -0.55
SEMA3B-214ENST00000619119 FAM223AQ8IWN6 122 aa11.62□□□□□ -0.55
SEMA3B-214ENST00000619119 FAM74A4Q5TZK3 123 aa11.61□□□□□ -0.55
SEMA3B-214ENST00000619119 C9orf47Q6ZRZ4 202 aa11.61□□□□□ -0.55
SEMA3B-214ENST00000619119 NOTCH2Q04721 2471 aa11.61□□□□□ -0.55
SEMA3B-214ENST00000619119 SETD2Q9BYW2 2564 aaPredicted RBP11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 MUC4Q99102 2169 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 A0A0U1RRA0 63 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 FHL2Q14192 279 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 KLK9Q2XQG4 91 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 RNASE13Q5GAN3 156 aaKnown RBP11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 WFDC11Q8NEX6 87 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 KLK9Q9UKQ9 250 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 USP17L23D6RBM5 183 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 RNASE4P34096 147 aaKnown RBP11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 C16orf92Q96LL3 132 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 KMT2BQ9UMN6 2715 aaPredicted RBP11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 TRAV21A0A0B4J279 112 aa11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 RPL11P62913 178 aaKnown RBP11.59□□□□□ -0.55
SEMA3B-214ENST00000619119 MTORP42345 2549 aa11.58□□□□□ -0.56
SEMA3B-214ENST00000619119 HECTD1Q9ULT8 2610 aa11.58□□□□□ -0.56
SEMA3B-214ENST00000619119 COX7A2LO14548 114 aa11.58□□□□□ -0.56
SEMA3B-214ENST00000619119 LINC00315P59091 139 aa11.58□□□□□ -0.56
SEMA3B-214ENST00000619119 RNASE3P12724 160 aaKnown RBP11.57□□□□□ -0.56
SEMA3B-214ENST00000619119 DNAL4O96015 105 aa11.57□□□□□ -0.56
SEMA3B-214ENST00000619119 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
SEMA3B-214ENST00000619119 Q9HAA7 133 aa11.57□□□□□ -0.56
SEMA3B-214ENST00000619119 INAFM2P0DMQ5 153 aa11.56□□□□□ -0.56
SEMA3B-214ENST00000619119 KRTAP1-3Q8IUG1 177 aa11.56□□□□□ -0.56
SEMA3B-214ENST00000619119 PLA2G2AP14555 144 aa11.56□□□□□ -0.56
SEMA3B-214ENST00000619119 CIRBPQ14011 172 aaKnown RBP11.56□□□□□ -0.56
SEMA3B-214ENST00000619119 USMG5Q96IX5 58 aa11.56□□□□□ -0.56
SEMA3B-214ENST00000619119 NF1P21359 2839 aa11.56□□□□□ -0.56
SEMA3B-214ENST00000619119 CUBNO60494 3623 aa11.56□□□□□ -0.56
SEMA3B-214ENST00000619119 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 IGHV4OR15-8A0A075B7B6 117 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 A0A087WW49 117 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 KIF25-AS1Q9Y6Z4 181 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 IGLV1-40P01703 118 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 C20orf173Q96LM9 149 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 J3QKU1 62 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 HOXD3P31249 432 aaPredicted RBP11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 LINC01561Q8N1V8 128 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 Q8N2B8 174 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 C22orf24Q9Y442 160 aa11.55□□□□□ -0.56
SEMA3B-214ENST00000619119 GCN1Q92616 2671 aaKnown RBP11.54□□□□□ -0.56
SEMA3B-214ENST00000619119 UNC79Q9P2D8 2635 aa11.54□□□□□ -0.56
SEMA3B-214ENST00000619119 TMEM243Q9BU79 118 aa11.54□□□□□ -0.56
SEMA3B-214ENST00000619119 TRBV27A0A0K0K1C4 114 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 CD28P10747 220 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 HIST2H2BDQ6DRA6 164 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 NDUFA4O00483 81 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 CFHR3Q02985 330 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 FAM218AQ96MZ4 157 aa11.53□□□□□ -0.56
SEMA3B-214ENST00000619119 C14orf132Q9NPU4 83 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms