RNA–Protein interactions for RNA: ENST00000616401.1

SOX2-OT-236, SOX2 overlapping transcript, humanhuman

Gene SOX2-OT, Length 69 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-236ENST00000616401 DDTP30046 118 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 SKP1P63208 163 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 REEP5Q00765 189 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 MRPL23Q16540 153 aaKnown RBP-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 MORN4Q8NDC4 146 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 CAPSLQ8WWF8 208 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 ANKRD36BP1Q96IX9 119 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 BTF3L4Q96K17 158 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 MCEEQ96PE7 176 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 ARPC5LQ9BPX5 153 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 MAP1LC3BQ9GZQ8 125 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 MAP1LC3AQ9H492 121 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 FAIMQ9NVQ4 179 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 MRM2Q9UI43 246 aaKnown RBP-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 SNX5Q9Y5X3 404 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 LINC00312Q9Y6C7 94 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 DDX60LQ5H9U9 1706 aaKnown RBP-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 UNC13AQ9UPW8 1703 aa-1.92□□□□□ -2.72
SOX2-OT-236ENST00000616401 ADGRL2O95490 1459 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 MRC2Q9UBG0 1479 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 MAP3K5Q99683 1374 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 TRAV21A0A0B4J279 112 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 TRBV7-6A0A0J9YX20 115 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 LOC285095A0A1B0GVY8 99 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 CCDC169A6NNP5 214 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 H7C2Y5 167 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 BIRC5O15392 142 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 MYL3P08590 195 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 IGLC1P0CG04 106 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 CCL1P22362 96 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 ATP5DP30049 168 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 DYNLT3P51808 116 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 RAB10P61026 200 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 UBE2KP61086 200 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 ARF3P61204 181 aaPredicted RBP-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 MAXP61244 160 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 ARF1P84077 181 aaKnown RBP-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 SFTA2Q6UW10 78 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 DYNLRB2Q8TF09 96 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 SKA1Q96BD8 255 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 LLPHQ9BRT6 129 aaKnown RBP-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 ARMC7Q9H6L4 198 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 OLA1Q9NTK5 396 aaKnown RBP-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 COMMD9Q9P000 198 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 CFDP1Q9UEE9 299 aaPredicted RBP-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 NFAT5O94916 1531 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 DUOX2Q9NRD8 1548 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 C5P01031 1676 aa-1.93□□□□□ -2.72
SOX2-OT-236ENST00000616401 CCDC88BA6NC98 1476 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 KCNE1BA0A087WTH5 132 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 TRBV2A0A0J9YWF9 115 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 A0A0U1RQV5 110 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 LOC100506127A0A0U1RQW1 187 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 EXOC1LA0A1B0GW35 172 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 TMEM213A2RRL7 107 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 C7orf77A4D0Y5 90 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 HMGB3O15347 200 aaKnown RBP-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 LEPROTL1O95214 131 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 CSN2P05814 226 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 SMIM10L2AP0DMW4 78 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 SMIM10L2BP0DMW5 78 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 CFL1P23528 166 aaKnown RBP-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 NME5P56597 212 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 CCL8P80075 99 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 SETQ01105 290 aaPredicted RBP-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 TMED2Q15363 201 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 CLLU1Q5K131 121 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 BCL2L15Q5TBC7 163 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 TTC33Q6PID6 262 aaPredicted RBP-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 SSX6Q7RTT6 188 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 LINC00305Q7Z4B0 112 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 TMEM86BQ8N661 226 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 OR5H6Q8NGV6 325 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 FAM45AQ8TCE6 357 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 TIPINQ9BVW5 301 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 DRC3Q9H069 523 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 NXT2Q9NPJ8 142 aaKnown RBP-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 RPRMQ9NS64 109 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 PARVAQ9NVD7 372 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 GCNT4Q9P109 453 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 ATXN10Q9UBB4 475 aa-1.94□□□□□ -2.72
SOX2-OT-236ENST00000616401 CC2D2AQ9P2K1 1620 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 CFAP43Q8NDM7 1665 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 IGHV1-24A0A0C4DH33 117 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 KRT87PA6NCN2 255 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 EFCAB9A8MZ26 197 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 C1orf196B1AJZ1 125 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 SUPT3HB4E1H0 165 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 ENSAO43768 121 aaKnown RBP-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 HIST1H2BKO60814 126 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 SCGB1D2O95969 90 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 HLA-DRAP01903 254 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 APOEP02649 317 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 HIST1H2BJP06899 126 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 LINC00614P0C842 121 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 SYT1P21579 422 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 CD9P21926 228 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 NFYBP25208 207 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 RRM2P31350 389 aa-1.95□□□□□ -2.72
SOX2-OT-236ENST00000616401 RPA3P35244 121 aaPredicted RBP-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms