RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 SOCS3O14543 225 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 IGHV4-59P01825 116 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 SDIM1Q6ZPB5 146 aa9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 ZNF462Q96JM2 2506 aa9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 IGHV1-58A0A0C4DH39 117 aa9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 NBL1P41271 181 aa9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 SNRPD3P62318 126 aaKnown RBP9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 PIMREGQ9BSJ6 248 aa9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 AVPP01185 164 aa9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 DNAJC30Q96LL9 226 aa9.85□□□□□ -0.83
PCDHA11-202ENST00000616325 UQCRQO14949 82 aa9.84□□□□□ -0.83
PCDHA11-202ENST00000616325 C11orf44Q8N8P7 122 aa9.84□□□□□ -0.83
PCDHA11-202ENST00000616325 LITAFQ99732 161 aa9.84□□□□□ -0.83
PCDHA11-202ENST00000616325 NOTCH2Q04721 2471 aa9.84□□□□□ -0.83
PCDHA11-202ENST00000616325 DOPEY1Q5JWR5 2465 aa9.84□□□□□ -0.83
PCDHA11-202ENST00000616325 TRBV7-7A0A0K0K1E9 115 aa9.83□□□□□ -0.84
PCDHA11-202ENST00000616325 CDKN2A-AS1Q9UH64 79 aa9.83□□□□□ -0.84
PCDHA11-202ENST00000616325 USMG5Q96IX5 58 aa9.83□□□□□ -0.84
PCDHA11-202ENST00000616325 Q9H8V8 135 aa9.83□□□□□ -0.84
PCDHA11-202ENST00000616325 LINC00643Q86TS7 51 aa9.82□□□□□ -0.84
PCDHA11-202ENST00000616325 Q8N2B8 174 aa9.82□□□□□ -0.84
PCDHA11-202ENST00000616325 SMIM9A6NGZ8 99 aa9.82□□□□□ -0.84
PCDHA11-202ENST00000616325 J3KT08 172 aa9.82□□□□□ -0.84
PCDHA11-202ENST00000616325 VSIG2Q96IQ7 327 aa9.82□□□□□ -0.84
PCDHA11-202ENST00000616325 MED14OSP0DP75 135 aa9.82□□□□□ -0.84
PCDHA11-202ENST00000616325 FAM240AA0A1B0GVK7 77 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 IGHG2P01859 326 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 IGHV1OR15-1A0A075B7D0 117 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 C5orf47Q569G3 176 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 A0A1B0GX51 115 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 TIRAPP58753 221 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 DCANP1Q8TF63 244 aa9.81□□□□□ -0.84
PCDHA11-202ENST00000616325 DEFB131AP59861 70 aa9.8□□□□□ -0.84
PCDHA11-202ENST00000616325 A0A087WVE0 104 aa9.8□□□□□ -0.84
PCDHA11-202ENST00000616325 CITED2Q99967 270 aaPredicted RBP9.8□□□□□ -0.84
PCDHA11-202ENST00000616325 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 KLLNB2CW77 178 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 TRACP01848 142 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 DEFB112Q30KQ8 113 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 TRBV6-5A0A0K0K1A5 114 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 IGHV3-53P01767 116 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 HIST1H4AP62805 103 aaKnown RBP9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 PRIMA1Q86XR5 153 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 LINC00526Q96FQ7 95 aa9.79□□□□□ -0.84
PCDHA11-202ENST00000616325 DNAL4O96015 105 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 ACYP1P07311 99 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 MSMBP08118 114 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 A0A0J9YX75 114 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 C18orf65Q6ZTR6 163 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 APRG1Q8IVJ8 170 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 PEMTQ9UBM1 199 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 IGSF10Q6WRI0 2623 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 NBEAL2Q6ZNJ1 2754 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 COX7CP15954 63 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 SPANXDQ9BXN6 97 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 SPANXCQ9NY87 97 aa9.78□□□□□ -0.84
PCDHA11-202ENST00000616325 HIVEP2P31629 2446 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 TINCRA0A1B0GVN0 87 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 OR13C6PQ8NH95 151 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 LINC00308Q8TCZ7 52 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 CYSTM1Q9H1C7 97 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 C14orf132Q9NPU4 83 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 COX7A2LO14548 114 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 UCNP55089 124 aa9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 MRPS36P82909 103 aaKnown RBP9.77□□□□□ -0.85
PCDHA11-202ENST00000616325 SLURP1P55000 103 aa9.76□□□□□ -0.85
PCDHA11-202ENST00000616325 TOMM7Q9P0U1 55 aa9.76□□□□□ -0.85
PCDHA11-202ENST00000616325 A6NDX4 124 aa9.76□□□□□ -0.85
PCDHA11-202ENST00000616325 RNF152Q8N8N0 203 aa9.76□□□□□ -0.85
PCDHA11-202ENST00000616325 UBE2E2Q96LR5 201 aa9.76□□□□□ -0.85
PCDHA11-202ENST00000616325 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
PCDHA11-202ENST00000616325 IMUPQ9GZP8 106 aa9.76□□□□□ -0.85
PCDHA11-202ENST00000616325 ATP5G1P05496 136 aa9.75□□□□□ -0.85
PCDHA11-202ENST00000616325 A0A1W2PRX2 142 aa9.75□□□□□ -0.85
PCDHA11-202ENST00000616325 FAM218AQ96MZ4 157 aa9.75□□□□□ -0.85
PCDHA11-202ENST00000616325 RNASE1P07998 156 aaKnown RBP9.75□□□□□ -0.85
PCDHA11-202ENST00000616325 FAM19A4Q96LR4 140 aa9.75□□□□□ -0.85
PCDHA11-202ENST00000616325 COX6A2Q02221 97 aa9.74□□□□□ -0.85
PCDHA11-202ENST00000616325 C19orf54Q5BKX5 351 aa9.74□□□□□ -0.85
PCDHA11-202ENST00000616325 RBMY1A1P0DJD3 496 aaKnown RBP9.74□□□□□ -0.85
PCDHA11-202ENST00000616325 RBMY1CP0DJD4 496 aa9.74□□□□□ -0.85
PCDHA11-202ENST00000616325 RBMY1FQ15415 496 aaKnown RBP9.74□□□□□ -0.85
PCDHA11-202ENST00000616325 XCL2Q9UBD3 114 aa9.74□□□□□ -0.85
PCDHA11-202ENST00000616325 CFHR3Q02985 330 aa9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 HRCT1Q6UXD1 115 aa9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 C10orf105Q8TEF2 133 aa9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 Q6ZSN1 163 aa9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 DEFB121Q5J5C9 76 aa9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 C9orf85Q96MD7 179 aa9.73□□□□□ -0.85
PCDHA11-202ENST00000616325 ATOX1O00244 68 aa9.72□□□□□ -0.85
PCDHA11-202ENST00000616325 IGLV1-40P01703 118 aa9.72□□□□□ -0.85
PCDHA11-202ENST00000616325 SLPIP03973 132 aa9.72□□□□□ -0.85
PCDHA11-202ENST00000616325 SOSTDC1Q6X4U4 206 aa9.72□□□□□ -0.85
PCDHA11-202ENST00000616325 LRRC75A-AS1Q8N1F1 130 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms