RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 ANKRD29Q8N6D5 301 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 TRACP01848 142 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 RNASE8Q8TDE3 154 aaKnown RBP6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 C11orf21Q9P2W6 132 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 UTRNP46939 3433 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 PCSK5Q92824 1860 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 A0A0J9YWU9 116 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 B5MCH6 92 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 MRGPRG-AS1Q2M3A8 158 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 TTTY13Q9BZ97 58 aa6.92□□□□□ -1.3
CLTCL1-208ENST00000615606 BAALC-AS2P0C853 105 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 IGHV4-4A0A075B6R2 117 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 LELP1Q5T871 98 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 NFE4Q86UQ8 179 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 MUSTN1Q8IVN3 82 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 RNF185Q96GF1 192 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 TRBV27A0A0K0K1C4 114 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 A4D1N5 150 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 HIGD2BQ4VC39 106 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 H0YGX0 51 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 UFSP1Q6NVU6 142 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 U3KQK5 164 aa6.91□□□□□ -1.3
CLTCL1-208ENST00000615606 UBE2AP49459 152 aa6.9□□□□□ -1.3
CLTCL1-208ENST00000615606 FXYD2P54710 66 aa6.9□□□□□ -1.3
CLTCL1-208ENST00000615606 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.3
CLTCL1-208ENST00000615606 MIAQ16674 131 aa6.9□□□□□ -1.31
CLTCL1-208ENST00000615606 NANOS2P60321 138 aaKnown RBP6.9□□□□□ -1.31
CLTCL1-208ENST00000615606 ORMDL1Q9P0S3 153 aa6.9□□□□□ -1.31
CLTCL1-208ENST00000615606 HIGD1BQ9P298 99 aa6.9□□□□□ -1.31
CLTCL1-208ENST00000615606 IGLV4-3A0A075B6K6 122 aa6.89□□□□□ -1.31
CLTCL1-208ENST00000615606 MIR7-3HGQ8N6C7 128 aa6.89□□□□□ -1.31
CLTCL1-208ENST00000615606 RBX1P62877 108 aa6.89□□□□□ -1.31
CLTCL1-208ENST00000615606 NUPR2A6NF83 97 aa6.89□□□□□ -1.31
CLTCL1-208ENST00000615606 SPANXCQ9NY87 97 aa6.89□□□□□ -1.31
CLTCL1-208ENST00000615606 PYGO1Q9Y3Y4 419 aa6.89□□□□□ -1.31
CLTCL1-208ENST00000615606 DNAH12Q6ZR08 3092 aa6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 FN1P02751 2386 aaKnown RBP6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 NCR3O14931 201 aa6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 PRM2P04554 102 aa6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 DAND5Q8N907 189 aa6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 DEFB105AQ8NG35 78 aa6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 TAX1BP3O14907 124 aa6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 SS18L2Q9UHA2 77 aa6.88□□□□□ -1.31
CLTCL1-208ENST00000615606 Q8N976 141 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 CNFNQ9BYD5 112 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 H3BQ85 93 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 IGKV2-24A0A0C4DH68 120 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 ACYP1P07311 99 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 WFDC2Q14508 124 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 CLUHP3Q96NS8 147 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 RETNQ9HD89 108 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 CDKN2A-AS1Q9UH64 79 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 LOC100131303A0A0U1RQF7 123 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 C1orf158Q8N1D5 194 aa6.87□□□□□ -1.31
CLTCL1-208ENST00000615606 TSHBP01222 138 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 TEN1Q86WV5 123 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 DIRC1Q969H9 104 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 hADV29S1A0JD25 119 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 UBE2D3P61077 147 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 UBE2D2P62837 147 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 NRACQ8N912 160 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 LINC01620Q4KN68 170 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 C2CD3Q4AC94 2353 aa6.86□□□□□ -1.31
CLTCL1-208ENST00000615606 IGLV2-18A0A075B6J9 118 aa6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 LY6G6CO95867 125 aa6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 POLR2KP53803 58 aaKnown RBP6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 FSHBP01225 129 aa6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 ZNF22P17026 224 aaPredicted RBP6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 CD164L2Q6UWJ8 174 aa6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
CLTCL1-208ENST00000615606 COX8CQ7Z4L0 72 aa6.84□□□□□ -1.31
CLTCL1-208ENST00000615606 RBM3P98179 157 aaKnown RBP6.84□□□□□ -1.31
CLTCL1-208ENST00000615606 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
CLTCL1-208ENST00000615606 MRPS36P82909 103 aaKnown RBP6.84□□□□□ -1.31
CLTCL1-208ENST00000615606 CHCHD7Q9BUK0 85 aa6.84□□□□□ -1.32
CLTCL1-208ENST00000615606 ANKRD17O75179 2603 aaKnown RBP6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 POLQO75417 2590 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 MTORP42345 2549 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 A0A0J9YXY3 114 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 TMEM223A0PJW6 202 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 IBA57-AS1B1ANH7 110 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 FUSP35637 526 aaKnown RBP eCLIP6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 KRTAP24-1Q3LI83 254 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 BEAN1Q3B7T3 259 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 B9D2Q9BPU9 175 aa6.83□□□□□ -1.32
CLTCL1-208ENST00000615606 TMEM258P61165 79 aa6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 FOXI1Q12951 378 aa6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 SETD2Q9BYW2 2564 aaPredicted RBP6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 UBE2D4Q9Y2X8 147 aa6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 M0R2N4 97 aa6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 FHL3Q13643 280 aa6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 LINC00959A0A1B0GUT2 108 aa6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 G3V4G9 280 aa6.82□□□□□ -1.32
CLTCL1-208ENST00000615606 C4orf48Q5BLP8 95 aa6.81□□□□□ -1.32
CLTCL1-208ENST00000615606 Q6ZTC4 211 aa6.81□□□□□ -1.32
CLTCL1-208ENST00000615606 COX7BP24311 80 aa6.81□□□□□ -1.32
CLTCL1-208ENST00000615606 YPEL4Q96NS1 127 aa6.81□□□□□ -1.32
CLTCL1-208ENST00000615606 A0A0B4J2C4 111 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms