RNA–Protein interactions for RNA: ENST00000613943.4

SMARCD2-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5 BASIC

Gene SMARCD2, Length 2,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-212ENST00000613943 GAGE12IP0CL82 117 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 GAGE4Q13068 117 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 GAGE5Q13069 117 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 GAGE13Q4V321 117 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 ARL17AQ8IVW1 177 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 SPANXA1Q9NS26 97 aa14.14□□□□□ -0.15
SMARCD2-212ENST00000613943 PLAC8L1A1L4L8 177 aa14.13□□□□□ -0.15
SMARCD2-212ENST00000613943 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.13□□□□□ -0.15
SMARCD2-212ENST00000613943 LOC100131303A0A0U1RQF7 123 aa14.12□□□□□ -0.15
SMARCD2-212ENST00000613943 EIF4EBP3O60516 100 aaPredicted RBP14.12□□□□□ -0.15
SMARCD2-212ENST00000613943 NTM-AS1Q6ZSK4 140 aa14.12□□□□□ -0.15
SMARCD2-212ENST00000613943 NBEAL2Q6ZNJ1 2754 aa14.12□□□□□ -0.15
SMARCD2-212ENST00000613943 A0A0J9YXY3 114 aa14.12□□□□□ -0.15
SMARCD2-212ENST00000613943 TEX48A0A1B0GUV7 120 aa14.12□□□□□ -0.15
SMARCD2-212ENST00000613943 K7EQD1 137 aa14.12□□□□□ -0.15
SMARCD2-212ENST00000613943 A4D1N5 150 aa14.11□□□□□ -0.15
SMARCD2-212ENST00000613943 SH2D6Q7Z4S9 175 aa14.11□□□□□ -0.15
SMARCD2-212ENST00000613943 DGAT2L7PQ6IED9 249 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 MUSTN1Q8IVN3 82 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 SPATA3Q8NHX4 192 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 CDKN2A-AS1Q9UH64 79 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 TRGV2A0A075B6R0 118 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 LY6G6DO95868 133 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 PCP4P48539 62 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 COX6A2Q02221 97 aa14.1□□□□□ -0.15
SMARCD2-212ENST00000613943 IGHV1-58A0A0C4DH39 117 aa14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 TINCRA0A1B0GVN0 87 aa14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 NPC2P61916 151 aa14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 H7C2G1 150 aa14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 RPL36AP83881 106 aaKnown RBP14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 CSNK1G2-AS1Q8NCQ2 148 aa14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 RPL36ALQ969Q0 106 aaKnown RBP14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 GEMIN7Q9H840 131 aaKnown RBP14.09□□□□□ -0.15
SMARCD2-212ENST00000613943 TRAV4A0A0B4J268 109 aa14.08□□□□□ -0.16
SMARCD2-212ENST00000613943 VSIG2Q96IQ7 327 aa14.08□□□□□ -0.16
SMARCD2-212ENST00000613943 G3V4G9 280 aa14.08□□□□□ -0.16
SMARCD2-212ENST00000613943 PSMB2P49721 201 aa14.08□□□□□ -0.16
SMARCD2-212ENST00000613943 CRYBA4P53673 196 aa14.08□□□□□ -0.16
SMARCD2-212ENST00000613943 ETDBQ3ZM63 59 aa14.08□□□□□ -0.16
SMARCD2-212ENST00000613943 ADAMTSL4-AS1Q5T5F5 129 aa14.08□□□□□ -0.16
SMARCD2-212ENST00000613943 TENM1Q9UKZ4 2725 aa14.07□□□□□ -0.16
SMARCD2-212ENST00000613943 NDUFA12Q9UI09 145 aa14.07□□□□□ -0.16
SMARCD2-212ENST00000613943 PF4P02776 101 aa14.07□□□□□ -0.16
SMARCD2-212ENST00000613943 LITAFQ99732 161 aa14.06□□□□□ -0.16
SMARCD2-212ENST00000613943 PRO0461Q9UI25 63 aa14.06□□□□□ -0.16
SMARCD2-212ENST00000613943 TRRAPQ9Y4A5 3859 aa14.06□□□□□ -0.16
SMARCD2-212ENST00000613943 TRAV13-1A0A0B4J241 112 aa14.06□□□□□ -0.16
SMARCD2-212ENST00000613943 DAZ2Q13117 558 aaKnown RBP14.06□□□□□ -0.16
SMARCD2-212ENST00000613943 C16orf74Q96GX8 76 aa14.06□□□□□ -0.16
SMARCD2-212ENST00000613943 F8W1H4 67 aa14.05□□□□□ -0.16
SMARCD2-212ENST00000613943 PRSS2P07478 247 aa14.05□□□□□ -0.16
SMARCD2-212ENST00000613943 UBE2D3P61077 147 aa14.05□□□□□ -0.16
SMARCD2-212ENST00000613943 UBE2D2P62837 147 aa14.05□□□□□ -0.16
SMARCD2-212ENST00000613943 DAND5Q8N907 189 aa14.04□□□□□ -0.16
SMARCD2-212ENST00000613943 TMEM238C9JI98 176 aa14.04□□□□□ -0.16
SMARCD2-212ENST00000613943 INAFM1C9JVW0 142 aa14.04□□□□□ -0.16
SMARCD2-212ENST00000613943 PRO1854Q9UHT4 67 aa14.04□□□□□ -0.16
SMARCD2-212ENST00000613943 NSD1Q96L73 2696 aaPredicted RBP14.03□□□□□ -0.16
SMARCD2-212ENST00000613943 LINC00242Q5T6M2 205 aa14.03□□□□□ -0.16
SMARCD2-212ENST00000613943 TRBV10-1A0A0K0K1A3 114 aa14.02□□□□□ -0.16
SMARCD2-212ENST00000613943 TCL1BO95988 128 aa14.02□□□□□ -0.16
SMARCD2-212ENST00000613943 CMC4P56277 68 aaPredicted RBP14.02□□□□□ -0.16
SMARCD2-212ENST00000613943 DAZ4Q86SG3 579 aaKnown RBP14.02□□□□□ -0.17
SMARCD2-212ENST00000613943 TMEM101Q96IK0 257 aa14.02□□□□□ -0.17
SMARCD2-212ENST00000613943 DAZ3Q9NR90 486 aaKnown RBP14.02□□□□□ -0.17
SMARCD2-212ENST00000613943 SMCPP49901 116 aaPredicted RBP14.01□□□□□ -0.17
SMARCD2-212ENST00000613943 INSL3P51460 131 aa14.01□□□□□ -0.17
SMARCD2-212ENST00000613943 ZNF625Q96I27 306 aaPredicted RBP14.01□□□□□ -0.17
SMARCD2-212ENST00000613943 TRGV4A0A0C4DH28 118 aa14.01□□□□□ -0.17
SMARCD2-212ENST00000613943 LINC00482Q8N8I6 264 aa14.01□□□□□ -0.17
SMARCD2-212ENST00000613943 FAM110AQ9BQ89 295 aa14.01□□□□□ -0.17
SMARCD2-212ENST00000613943 DEFB130BP0DP73 79 aa14□□□□□ -0.17
SMARCD2-212ENST00000613943 DEFB130AP0DP74 79 aa14□□□□□ -0.17
SMARCD2-212ENST00000613943 C1QTNF4Q9BXJ3 329 aa14□□□□□ -0.17
SMARCD2-212ENST00000613943 A0A0U1RRA0 63 aa13.99□□□□□ -0.17
SMARCD2-212ENST00000613943 SBSPONQ8IVN8 264 aa13.99□□□□□ -0.17
SMARCD2-212ENST00000613943 SCGB1C2P0DMR2 95 aa13.99□□□□□ -0.17
SMARCD2-212ENST00000613943 CRLF1O75462 422 aa13.98□□□□□ -0.17
SMARCD2-212ENST00000613943 IGHV3-33P01772 117 aa13.98□□□□□ -0.17
SMARCD2-212ENST00000613943 ZFAND6Q6FIF0 208 aa13.98□□□□□ -0.17
SMARCD2-212ENST00000613943 HIVEP1P15822 2718 aa13.97□□□□□ -0.17
SMARCD2-212ENST00000613943 IGLV5-45A0A087WSX0 123 aa13.97□□□□□ -0.17
SMARCD2-212ENST00000613943 IGKV3OR2-268A0A0C4DH90 116 aa13.97□□□□□ -0.17
SMARCD2-212ENST00000613943 TIRAPP58753 221 aa13.97□□□□□ -0.17
SMARCD2-212ENST00000613943 CDC42SE2Q9NRR3 84 aa13.97□□□□□ -0.17
SMARCD2-212ENST00000613943 OVOL2Q9BRP0 275 aa13.97□□□□□ -0.17
SMARCD2-212ENST00000613943 UBE2L6O14933 153 aa13.96□□□□□ -0.17
SMARCD2-212ENST00000613943 FHL2Q14192 279 aa13.96□□□□□ -0.17
SMARCD2-212ENST00000613943 Q1RN00 199 aa13.96□□□□□ -0.17
SMARCD2-212ENST00000613943 ATRQ13535 2644 aa13.96□□□□□ -0.17
SMARCD2-212ENST00000613943 GAGE6Q13070 117 aa13.95□□□□□ -0.18
SMARCD2-212ENST00000613943 TMEM243Q9BU79 118 aa13.95□□□□□ -0.18
SMARCD2-212ENST00000613943 Q9H8V8 135 aa13.95□□□□□ -0.18
SMARCD2-212ENST00000613943 ERG28Q9UKR5 140 aa13.95□□□□□ -0.18
SMARCD2-212ENST00000613943 A0A0B4J2C4 111 aa13.95□□□□□ -0.18
SMARCD2-212ENST00000613943 HERVK_113P63121 156 aa13.95□□□□□ -0.18
SMARCD2-212ENST00000613943 TRBV6-4A0A1B0GX49 114 aa13.94□□□□□ -0.18
SMARCD2-212ENST00000613943 SMIM1B2RUZ4 78 aa13.94□□□□□ -0.18
SMARCD2-212ENST00000613943 MIAQ16674 131 aa13.94□□□□□ -0.18
SMARCD2-212ENST00000613943 CSDC2Q9Y534 153 aaKnown RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms