RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NPSP0C0P6 89 aa9.95□□□□□ -0.82
CD48-203ENST00000613788 LINC00310P59036 64 aa9.95□□□□□ -0.82
CD48-203ENST00000613788 PMCHL1Q16048 86 aa9.95□□□□□ -0.82
CD48-203ENST00000613788 ZNF664Q8N3J9 261 aa9.95□□□□□ -0.82
CD48-203ENST00000613788 SCGB3A1Q96QR1 104 aa9.95□□□□□ -0.82
CD48-203ENST00000613788 CDC42SE2Q9NRR3 84 aa9.95□□□□□ -0.82
CD48-203ENST00000613788 A0A096LNJ9 63 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 IGIPA6NJ69 53 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 IBA57-AS1B1ANH7 110 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 NUPR1O60356 82 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
CD48-203ENST00000613788 LINC00269Q8N2A0 174 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 FAM19A2Q8N3H0 131 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 TMEM141Q96I45 108 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 TIMM17AQ99595 171 aa9.94□□□□□ -0.82
CD48-203ENST00000613788 S100A6P06703 90 aa9.93□□□□□ -0.82
CD48-203ENST00000613788 PAPPA-AS1Q5QFB9 102 aa9.93□□□□□ -0.82
CD48-203ENST00000613788 TRAV8-3A0A0A6YYJ7 113 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 M0R2N4 97 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 CRPP02741 224 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 REG3AQ06141 175 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 PDZD11Q5EBL8 140 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 Q6ZN92 141 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 UBE2WQ96B02 151 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 PRR34Q9NV39 138 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 IGLV4-3A0A075B6K6 122 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.92□□□□□ -0.82
CD48-203ENST00000613788 ATP5LO75964 103 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 Q6ZUT4 128 aa9.92□□□□□ -0.82
CD48-203ENST00000613788 ENHOQ6UWT2 76 aa9.91□□□□□ -0.82
CD48-203ENST00000613788 Q6ZR54 194 aa9.91□□□□□ -0.82
CD48-203ENST00000613788 OPRPNQ99935 248 aaPredicted RBP9.91□□□□□ -0.82
CD48-203ENST00000613788 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
CD48-203ENST00000613788 VCX2Q9H322 139 aa9.91□□□□□ -0.82
CD48-203ENST00000613788 LEPROTL1O95214 131 aa9.9□□□□□ -0.82
CD48-203ENST00000613788 MIAQ16674 131 aa9.9□□□□□ -0.82
CD48-203ENST00000613788 CLPSL2Q6UWE3 100 aa9.9□□□□□ -0.82
CD48-203ENST00000613788 TEX43Q6ZNM6 134 aa9.9□□□□□ -0.82
CD48-203ENST00000613788 FAM104AQ969W3 186 aa9.9□□□□□ -0.82
CD48-203ENST00000613788 IGKV3OR2-268A0A0C4DH90 116 aa9.89□□□□□ -0.83
CD48-203ENST00000613788 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
CD48-203ENST00000613788 NFE4Q86UQ8 179 aa9.89□□□□□ -0.83
CD48-203ENST00000613788 HSPB8Q9UJY1 196 aa9.89□□□□□ -0.83
CD48-203ENST00000613788 DNAH6Q9C0G6 4158 aa9.88□□□□□ -0.83
CD48-203ENST00000613788 TRAV8-4A0A0B4J246 113 aa9.88□□□□□ -0.83
CD48-203ENST00000613788 CCL25O15444 150 aa9.88□□□□□ -0.83
CD48-203ENST00000613788 RMI2Q96E14 147 aa9.88□□□□□ -0.83
CD48-203ENST00000613788 C2orf88Q9BSF0 95 aa9.88□□□□□ -0.83
CD48-203ENST00000613788 Q9HAA7 133 aa9.88□□□□□ -0.83
CD48-203ENST00000613788 SACSQ9NZJ4 4579 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 FABP4P15090 132 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 SS18Q15532 418 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 IFI27L1Q96BM0 104 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 AMELXQ99217 191 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 KMT2AQ03164 3969 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 LINC00959A0A1B0GUT2 108 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 IFITM10A6NMD0 228 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 C6orf223Q8N319 242 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 BAALCQ8WXS3 180 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 PACRGQ96M98 296 aaPredicted RBP9.87□□□□□ -0.83
CD48-203ENST00000613788 C1orf43Q9BWL3 253 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 TM2D2Q9BX73 214 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 COX11Q9Y6N1 276 aa9.87□□□□□ -0.83
CD48-203ENST00000613788 IGKV2D-24A0A075B6R9 120 aa9.86□□□□□ -0.83
CD48-203ENST00000613788 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
CD48-203ENST00000613788 PRSS1P07477 247 aa9.86□□□□□ -0.83
CD48-203ENST00000613788 PMVKQ15126 192 aa9.86□□□□□ -0.83
CD48-203ENST00000613788 C1orf134Q5TEV5 83 aa9.86□□□□□ -0.83
CD48-203ENST00000613788 S100A2P29034 98 aa9.85□□□□□ -0.83
CD48-203ENST00000613788 SNRPEP62304 92 aaKnown RBP9.85□□□□□ -0.83
CD48-203ENST00000613788 CST9LQ9H4G1 147 aa9.85□□□□□ -0.83
CD48-203ENST00000613788 IGLV10-54A0A075B6I4 117 aa9.84□□□□□ -0.83
CD48-203ENST00000613788 C5orf52A6NGY3 159 aa9.84□□□□□ -0.83
CD48-203ENST00000613788 ZC2HC1BQ5TFG8 222 aa9.84□□□□□ -0.83
CD48-203ENST00000613788 LINC00173Q6ZV60 143 aa9.84□□□□□ -0.83
CD48-203ENST00000613788 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
CD48-203ENST00000613788 CHCHD10Q8WYQ3 142 aaPredicted RBP9.83□□□□□ -0.84
CD48-203ENST00000613788 MAP1LC3CQ9BXW4 147 aa9.83□□□□□ -0.84
CD48-203ENST00000613788 HYDINQ4G0P3 5121 aa9.83□□□□□ -0.84
CD48-203ENST00000613788 PRSS29PA6NIE9 313 aa9.82□□□□□ -0.84
CD48-203ENST00000613788 PSCAO43653 123 aa9.82□□□□□ -0.84
CD48-203ENST00000613788 UBE2D1P51668 147 aa9.82□□□□□ -0.84
CD48-203ENST00000613788 SEC11AP67812 179 aa9.82□□□□□ -0.84
CD48-203ENST00000613788 KMT2CQ8NEZ4 4911 aaKnown RBP9.82□□□□□ -0.84
CD48-203ENST00000613788 TRAV12-1A0A0B4J245 112 aa9.82□□□□□ -0.84
CD48-203ENST00000613788 XCL1P47992 114 aa9.82□□□□□ -0.84
CD48-203ENST00000613788 CD164L2Q6UWJ8 174 aa9.81□□□□□ -0.84
CD48-203ENST00000613788 FAM19A3Q7Z5A8 133 aa9.81□□□□□ -0.84
CD48-203ENST00000613788 GAGE12HA6NDE8 117 aa9.8□□□□□ -0.84
CD48-203ENST00000613788 LINC00242Q5T6M2 205 aa9.8□□□□□ -0.84
CD48-203ENST00000613788 HIST1H2BLQ99880 126 aa9.8□□□□□ -0.84
CD48-203ENST00000613788 H0Y8G0 127 aa9.79□□□□□ -0.84
CD48-203ENST00000613788 HERVK_113P63121 156 aa9.79□□□□□ -0.84
CD48-203ENST00000613788 KRTAP26-1Q6PEX3 210 aa9.79□□□□□ -0.84
CD48-203ENST00000613788 Q6ZRN7 208 aaPredicted RBP9.79□□□□□ -0.84
CD48-203ENST00000613788 GEMIN7Q9H840 131 aaKnown RBP9.79□□□□□ -0.84
CD48-203ENST00000613788 CHTOPQ9Y3Y2 248 aaKnown RBP9.79□□□□□ -0.84
CD48-203ENST00000613788 A0A0J9YXV3 536 aa9.78□□□□□ -0.84
CD48-203ENST00000613788 TINCRA0A1B0GVN0 87 aa9.78□□□□□ -0.84
CD48-203ENST00000613788 RYR2Q92736 4967 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms