RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 IGKV3OR2-268A0A0C4DH90 116 aa8.84□□□□□ -0.99
MDC1-209ENST00000613547 IFI27P40305 119 aaPredicted RBP8.84□□□□□ -0.99
MDC1-209ENST00000613547 ZNF664Q8N3J9 261 aa8.84□□□□□ -0.99
MDC1-209ENST00000613547 CYSLTR1Q9Y271 337 aa8.84□□□□□ -0.99
MDC1-209ENST00000613547 IGLV10-54A0A075B6I4 117 aa8.83□□□□□ -1
MDC1-209ENST00000613547 RPL39P62891 51 aaKnown RBP8.83□□□□□ -1
MDC1-209ENST00000613547 FA2HQ7L5A8 372 aa8.83□□□□□ -1
MDC1-209ENST00000613547 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
MDC1-209ENST00000613547 A0A1B0GVY2 172 aa8.82□□□□□ -1
MDC1-209ENST00000613547 DNAH2Q9P225 4427 aa8.82□□□□□ -1
MDC1-209ENST00000613547 DNAH10Q8IVF4 4471 aa8.81□□□□□ -1
MDC1-209ENST00000613547 LINC01549A6NIU2 74 aa8.81□□□□□ -1
MDC1-209ENST00000613547 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
MDC1-209ENST00000613547 LRCOL1A6NCL2 159 aa8.8□□□□□ -1
MDC1-209ENST00000613547 CCL25O15444 150 aa8.8□□□□□ -1
MDC1-209ENST00000613547 S100A1P23297 94 aa8.8□□□□□ -1
MDC1-209ENST00000613547 RAB5BP61020 215 aa8.8□□□□□ -1
MDC1-209ENST00000613547 MRPS36P82909 103 aaKnown RBP8.8□□□□□ -1
MDC1-209ENST00000613547 SS18Q15532 418 aa8.8□□□□□ -1
MDC1-209ENST00000613547 Q6ZUT4 128 aa8.8□□□□□ -1
MDC1-209ENST00000613547 SPATA12Q7Z6I5 190 aa8.8□□□□□ -1
MDC1-209ENST00000613547 C18orf32Q8TCD1 76 aa8.8□□□□□ -1
MDC1-209ENST00000613547 BAALCQ8WXS3 180 aa8.8□□□□□ -1
MDC1-209ENST00000613547 PYGO1Q9Y3Y4 419 aa8.8□□□□□ -1
MDC1-209ENST00000613547 LINC00959A0A1B0GUT2 108 aa8.79□□□□□ -1
MDC1-209ENST00000613547 C14orf177Q52M58 125 aa8.79□□□□□ -1
MDC1-209ENST00000613547 Q6ZN92 141 aa8.79□□□□□ -1
MDC1-209ENST00000613547 CHCHD10Q8WYQ3 142 aaPredicted RBP8.79□□□□□ -1
MDC1-209ENST00000613547 AP5S1Q9NUS5 200 aa8.79□□□□□ -1
MDC1-209ENST00000613547 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
MDC1-209ENST00000613547 LINC01546A6NGU7 62 aa8.78□□□□□ -1
MDC1-209ENST00000613547 COLCA2A8K830 154 aa8.78□□□□□ -1
MDC1-209ENST00000613547 C1orf196B1AJZ1 125 aa8.78□□□□□ -1
MDC1-209ENST00000613547 LECT2O14960 151 aa8.78□□□□□ -1
MDC1-209ENST00000613547 SCO1O75880 301 aa8.78□□□□□ -1
MDC1-209ENST00000613547 NPSP0C0P6 89 aa8.78□□□□□ -1
MDC1-209ENST00000613547 RNASE13Q5GAN3 156 aaKnown RBP8.78□□□□□ -1
MDC1-209ENST00000613547 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
MDC1-209ENST00000613547 Q8N814 137 aa8.78□□□□□ -1
MDC1-209ENST00000613547 MAPKAPK5-AS1Q8N8E1 139 aa8.78□□□□□ -1
MDC1-209ENST00000613547 TMEM141Q96I45 108 aa8.78□□□□□ -1
MDC1-209ENST00000613547 TRAV13-1A0A0B4J241 112 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 GAGE12HA6NDE8 117 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 TRGC2P03986 189 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 LINC00614P0C842 121 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 XCL1P47992 114 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 CDPF1Q6NVV7 123 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 KRTAP26-1Q6PEX3 210 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 NTN5Q8WTR8 489 aaPredicted RBP8.77□□□□□ -1.01
MDC1-209ENST00000613547 TOMM6Q96B49 74 aa8.77□□□□□ -1.01
MDC1-209ENST00000613547 IFITM10A6NMD0 228 aa8.76□□□□□ -1.01
MDC1-209ENST00000613547 USP17L23D6RBM5 183 aa8.76□□□□□ -1.01
MDC1-209ENST00000613547 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
MDC1-209ENST00000613547 TEX43Q6ZNM6 134 aa8.76□□□□□ -1.01
MDC1-209ENST00000613547 FAT2Q9NYQ8 4349 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 IGLV4-3A0A075B6K6 122 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 C16orf90A8MZG2 172 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 WFDC2Q14508 124 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 CFAP161Q6P656 301 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 CD164L2Q6UWJ8 174 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 ERASQ7Z444 233 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 SCGB3A1Q96QR1 104 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 TIMM17AQ99595 171 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 OPRPNQ99935 248 aaPredicted RBP8.75□□□□□ -1.01
MDC1-209ENST00000613547 C2orf88Q9BSF0 95 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 VCX2Q9H322 139 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 FRAS1Q86XX4 4008 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 DNAH17Q9UFH2 4485 aa8.75□□□□□ -1.01
MDC1-209ENST00000613547 IGLV5-52A0A0A0MRZ9 124 aa8.74□□□□□ -1.01
MDC1-209ENST00000613547 IGIPA6NJ69 53 aa8.74□□□□□ -1.01
MDC1-209ENST00000613547 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
MDC1-209ENST00000613547 BAGE3Q86Y29 109 aa8.74□□□□□ -1.01
MDC1-209ENST00000613547 CHCHD1Q96BP2 118 aaKnown RBP8.74□□□□□ -1.01
MDC1-209ENST00000613547 HECTD4Q9Y4D8 3996 aa8.73□□□□□ -1.01
MDC1-209ENST00000613547 FOXI1Q12951 378 aa8.73□□□□□ -1.01
MDC1-209ENST00000613547 FAM104AQ969W3 186 aa8.73□□□□□ -1.01
MDC1-209ENST00000613547 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.72□□□□□ -1.01
MDC1-209ENST00000613547 COX7A2LO14548 114 aa8.72□□□□□ -1.01
MDC1-209ENST00000613547 HBDP02042 147 aa8.72□□□□□ -1.01
MDC1-209ENST00000613547 MALP21145 153 aa8.72□□□□□ -1.01
MDC1-209ENST00000613547 URB1-AS1Q96HZ7 61 aa8.72□□□□□ -1.01
MDC1-209ENST00000613547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.71□□□□□ -1.02
MDC1-209ENST00000613547 HSBP1O75506 76 aa8.71□□□□□ -1.02
MDC1-209ENST00000613547 hDV102S1A0JD36 115 aa8.7□□□□□ -1.02
MDC1-209ENST00000613547 AMELXQ99217 191 aa8.7□□□□□ -1.02
MDC1-209ENST00000613547 EPPK1P58107 5090 aaKnown RBP8.7□□□□□ -1.02
MDC1-209ENST00000613547 IGHV1-58A0A0C4DH39 117 aa8.69□□□□□ -1.02
MDC1-209ENST00000613547 APOMO95445 188 aa8.69□□□□□ -1.02
MDC1-209ENST00000613547 PRSS1P07477 247 aa8.69□□□□□ -1.02
MDC1-209ENST00000613547 GCSHP23434 173 aa8.69□□□□□ -1.02
MDC1-209ENST00000613547 SEC11AP67812 179 aa8.69□□□□□ -1.02
MDC1-209ENST00000613547 PMCHL1Q16048 86 aa8.69□□□□□ -1.02
MDC1-209ENST00000613547 A0A096LNJ9 63 aa8.68□□□□□ -1.02
MDC1-209ENST00000613547 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.68□□□□□ -1.02
MDC1-209ENST00000613547 ATP5LO75964 103 aa8.68□□□□□ -1.02
MDC1-209ENST00000613547 FUSP35637 526 aaKnown RBP eCLIP8.68□□□□□ -1.02
MDC1-209ENST00000613547 UBE2D1P51668 147 aa8.68□□□□□ -1.02
MDC1-209ENST00000613547 LINC00173Q6ZV60 143 aa8.68□□□□□ -1.02
MDC1-209ENST00000613547 C5orf38Q86SI9 138 aa8.68□□□□□ -1.02
MDC1-209ENST00000613547 C15orf56Q8N910 161 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms