RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 PSMG3-AS1Q96PY0 264 aa12.94□□□□□ -0.34
HMGXB3-206ENST00000613459 LTBP2Q14767 1821 aa12.94□□□□□ -0.34
HMGXB3-206ENST00000613459 MRGPRG-AS1Q2M3A8 158 aa12.94□□□□□ -0.34
HMGXB3-206ENST00000613459 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
HMGXB3-206ENST00000613459 FREM1Q5H8C1 2179 aa12.93□□□□□ -0.34
HMGXB3-206ENST00000613459 ZNF706Q9Y5V0 76 aaPredicted RBP12.93□□□□□ -0.34
HMGXB3-206ENST00000613459 TTC28Q96AY4 2481 aa12.93□□□□□ -0.34
HMGXB3-206ENST00000613459 SHISA2Q6UWI4 295 aa12.93□□□□□ -0.34
HMGXB3-206ENST00000613459 CD164L2Q6UWJ8 174 aa12.93□□□□□ -0.34
HMGXB3-206ENST00000613459 Q8N6K4 173 aa12.93□□□□□ -0.34
HMGXB3-206ENST00000613459 LST1O00453 97 aa12.92□□□□□ -0.34
HMGXB3-206ENST00000613459 IGLV2-11P01706 119 aa12.92□□□□□ -0.34
HMGXB3-206ENST00000613459 WFDC11Q8NEX6 87 aa12.92□□□□□ -0.34
HMGXB3-206ENST00000613459 COX7CP15954 63 aa12.92□□□□□ -0.34
HMGXB3-206ENST00000613459 NCOA6Q14686 2063 aaPredicted RBP12.91□□□□□ -0.34
HMGXB3-206ENST00000613459 A0A0U1RQV1 116 aa12.91□□□□□ -0.34
HMGXB3-206ENST00000613459 COX17Q14061 63 aa12.91□□□□□ -0.34
HMGXB3-206ENST00000613459 MUC6Q6W4X9 2439 aa12.91□□□□□ -0.34
HMGXB3-206ENST00000613459 M0R378 163 aa12.91□□□□□ -0.34
HMGXB3-206ENST00000613459 TECTAO75443 2155 aa12.91□□□□□ -0.34
HMGXB3-206ENST00000613459 TRAV10A0A0B4J240 114 aa12.9□□□□□ -0.34
HMGXB3-206ENST00000613459 TSHBP01222 138 aa12.9□□□□□ -0.34
HMGXB3-206ENST00000613459 Q6ZSV7 163 aa12.9□□□□□ -0.34
HMGXB3-206ENST00000613459 NRACQ8N912 160 aa12.9□□□□□ -0.34
HMGXB3-206ENST00000613459 CCKP06307 115 aa12.9□□□□□ -0.34
HMGXB3-206ENST00000613459 PTPRQQ9UMZ3 2332 aa12.9□□□□□ -0.34
HMGXB3-206ENST00000613459 KLLNB2CW77 178 aa12.9□□□□□ -0.34
HMGXB3-206ENST00000613459 FAM19A3Q7Z5A8 133 aa12.89□□□□□ -0.35
HMGXB3-206ENST00000613459 WFDC10BQ8IUB3 73 aa12.89□□□□□ -0.35
HMGXB3-206ENST00000613459 BDP1A6H8Y1 2624 aa12.89□□□□□ -0.35
HMGXB3-206ENST00000613459 C6orf99Q4VX62 202 aa12.89□□□□□ -0.35
HMGXB3-206ENST00000613459 ADAMTS9Q9P2N4 1935 aa12.89□□□□□ -0.35
HMGXB3-206ENST00000613459 C9orf85Q96MD7 179 aa12.88□□□□□ -0.35
HMGXB3-206ENST00000613459 A0A087WZ39 114 aa12.88□□□□□ -0.35
HMGXB3-206ENST00000613459 XGP55808 180 aa12.88□□□□□ -0.35
HMGXB3-206ENST00000613459 C19orf84I3L1E1 186 aa12.88□□□□□ -0.35
HMGXB3-206ENST00000613459 Q6Q795 121 aa12.88□□□□□ -0.35
HMGXB3-206ENST00000613459 CCDC179H3BU77 68 aa12.87□□□□□ -0.35
HMGXB3-206ENST00000613459 Q6JHZ5 121 aa12.87□□□□□ -0.35
HMGXB3-206ENST00000613459 LELP1Q5T871 98 aa12.87□□□□□ -0.35
HMGXB3-206ENST00000613459 PLCE1Q9P212 2302 aa12.87□□□□□ -0.35
HMGXB3-206ENST00000613459 KIAA1549LQ6ZVL6 1849 aa12.87□□□□□ -0.35
HMGXB3-206ENST00000613459 RNASE3P12724 160 aaKnown RBP12.86□□□□□ -0.35
HMGXB3-206ENST00000613459 POLR2KP53803 58 aaKnown RBP12.86□□□□□ -0.35
HMGXB3-206ENST00000613459 CNFNQ9BYD5 112 aa12.86□□□□□ -0.35
HMGXB3-206ENST00000613459 IGLV4-69A0A075B6H9 119 aa12.86□□□□□ -0.35
HMGXB3-206ENST00000613459 C7orf33Q8WU49 177 aa12.86□□□□□ -0.35
HMGXB3-206ENST00000613459 UBE2D4Q9Y2X8 147 aa12.86□□□□□ -0.35
HMGXB3-206ENST00000613459 ZNF702PQ9H963 129 aa12.85□□□□□ -0.35
HMGXB3-206ENST00000613459 SNURFQ9Y675 71 aa12.84□□□□□ -0.35
HMGXB3-206ENST00000613459 ANKHD1Q8IWZ3 2542 aaKnown RBP12.84□□□□□ -0.35
HMGXB3-206ENST00000613459 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.83□□□□□ -0.35
HMGXB3-206ENST00000613459 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
HMGXB3-206ENST00000613459 IGLV1-40P01703 118 aa12.83□□□□□ -0.36
HMGXB3-206ENST00000613459 UBE2D1P51668 147 aa12.82□□□□□ -0.36
HMGXB3-206ENST00000613459 FAM19A5Q7Z5A7 132 aaPredicted RBP12.82□□□□□ -0.36
HMGXB3-206ENST00000613459 C22orf34Q6ZV56 151 aa12.82□□□□□ -0.36
HMGXB3-206ENST00000613459 LINC00959A0A1B0GUT2 108 aa12.82□□□□□ -0.36
HMGXB3-206ENST00000613459 Q8IZM0 81 aa12.81□□□□□ -0.36
HMGXB3-206ENST00000613459 LOC107984640A0A0U1RRK4 108 aa12.81□□□□□ -0.36
HMGXB3-206ENST00000613459 C3orf84H3BNL1 204 aa12.81□□□□□ -0.36
HMGXB3-206ENST00000613459 XAGE1AQ9HD64 81 aa12.81□□□□□ -0.36
HMGXB3-206ENST00000613459 SMIM11BQ8TCY0 68 aa12.81□□□□□ -0.36
HMGXB3-206ENST00000613459 A6NED7 52 aa12.8□□□□□ -0.36
HMGXB3-206ENST00000613459 ACACBO00763 2458 aa12.8□□□□□ -0.36
HMGXB3-206ENST00000613459 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.8□□□□□ -0.36
HMGXB3-206ENST00000613459 BBC3Q96PG8 261 aaPredicted RBP12.8□□□□□ -0.36
HMGXB3-206ENST00000613459 DCANP1Q8TF63 244 aa12.8□□□□□ -0.36
HMGXB3-206ENST00000613459 SPG11Q96JI7 2443 aa12.8□□□□□ -0.36
HMGXB3-206ENST00000613459 PROK1P58294 105 aa12.79□□□□□ -0.36
HMGXB3-206ENST00000613459 Q6ZQY7 126 aa12.79□□□□□ -0.36
HMGXB3-206ENST00000613459 LINC00474Q9P2X8 69 aa12.79□□□□□ -0.36
HMGXB3-206ENST00000613459 A0A096LNI7 61 aa12.78□□□□□ -0.36
HMGXB3-206ENST00000613459 C1orf195Q5TG92 126 aa12.78□□□□□ -0.36
HMGXB3-206ENST00000613459 SMIM26A0A096LP01 95 aa12.78□□□□□ -0.36
HMGXB3-206ENST00000613459 PCDH15Q96QU1 1955 aa12.78□□□□□ -0.36
HMGXB3-206ENST00000613459 A8MZ25 164 aa12.77□□□□□ -0.36
HMGXB3-206ENST00000613459 CHCHD7Q9BUK0 85 aa12.77□□□□□ -0.36
HMGXB3-206ENST00000613459 UBE2D3P61077 147 aa12.77□□□□□ -0.37
HMGXB3-206ENST00000613459 UBE2D2P62837 147 aa12.77□□□□□ -0.37
HMGXB3-206ENST00000613459 Q6ZS46 218 aa12.76□□□□□ -0.37
HMGXB3-206ENST00000613459 Q8N9L7 120 aa12.76□□□□□ -0.37
HMGXB3-206ENST00000613459 SERP1Q9Y6X1 66 aa12.76□□□□□ -0.37
HMGXB3-206ENST00000613459 URB1-AS1Q96HZ7 61 aa12.75□□□□□ -0.37
HMGXB3-206ENST00000613459 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
HMGXB3-206ENST00000613459 PRR9Q5T870 116 aa12.75□□□□□ -0.37
HMGXB3-206ENST00000613459 NUP210LQ5VU65 1888 aa12.75□□□□□ -0.37
HMGXB3-206ENST00000613459 ZNF73O43830 326 aaPredicted RBP12.75□□□□□ -0.37
HMGXB3-206ENST00000613459 LINC00694P0DN24 101 aa12.75□□□□□ -0.37
HMGXB3-206ENST00000613459 KPRPQ5T749 579 aaPredicted RBP12.75□□□□□ -0.37
HMGXB3-206ENST00000613459 WFDC13Q8IUB5 93 aa12.74□□□□□ -0.37
HMGXB3-206ENST00000613459 M0QXV9 152 aa12.74□□□□□ -0.37
HMGXB3-206ENST00000613459 TRAV7A0A075B6U4 112 aa12.74□□□□□ -0.37
HMGXB3-206ENST00000613459 INAFM1C9JVW0 142 aa12.74□□□□□ -0.37
HMGXB3-206ENST00000613459 LINC00482Q8N8I6 264 aa12.74□□□□□ -0.37
HMGXB3-206ENST00000613459 CDC42SE2Q9NRR3 84 aa12.73□□□□□ -0.37
HMGXB3-206ENST00000613459 LINC01006Q8NI28 216 aa12.73□□□□□ -0.37
HMGXB3-206ENST00000613459 MED12LQ86YW9 2145 aa12.73□□□□□ -0.37
HMGXB3-206ENST00000613459 TNCP24821 2201 aa12.72□□□□□ -0.37
HMGXB3-206ENST00000613459 COL4A4P53420 1690 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 137.8 ms