RNA–Protein interactions for RNA: ENST00000612930.1

TSKU-205, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 4 BASIC

Gene TSKU, Length 2,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-205ENST00000612930 hADV29S1A0JD25 119 aa11.94□□□□□ -0.5
TSKU-205ENST00000612930 SMIM9A6NGZ8 99 aa11.94□□□□□ -0.5
TSKU-205ENST00000612930 INAFM2P0DMQ5 153 aa11.94□□□□□ -0.5
TSKU-205ENST00000612930 C5orf47Q569G3 176 aa11.94□□□□□ -0.5
TSKU-205ENST00000612930 ATOX1O00244 68 aa11.94□□□□□ -0.5
TSKU-205ENST00000612930 SMIM1B2RUZ4 78 aa11.93□□□□□ -0.5
TSKU-205ENST00000612930 MALP21145 153 aa11.93□□□□□ -0.5
TSKU-205ENST00000612930 PRORYQ9H606 182 aa11.93□□□□□ -0.5
TSKU-205ENST00000612930 C10orf99Q6UWK7 81 aa11.93□□□□□ -0.5
TSKU-205ENST00000612930 RIF1Q5UIP0 2472 aaKnown RBP11.92□□□□□ -0.5
TSKU-205ENST00000612930 PIK3CD-AS1Q5SR53 167 aa11.92□□□□□ -0.5
TSKU-205ENST00000612930 COPS9Q8WXC6 57 aa11.92□□□□□ -0.5
TSKU-205ENST00000612930 HOXD3P31249 432 aaPredicted RBP11.92□□□□□ -0.5
TSKU-205ENST00000612930 DGAT2L7PQ6IED9 249 aa11.92□□□□□ -0.5
TSKU-205ENST00000612930 K7ENP7 123 aa11.91□□□□□ -0.5
TSKU-205ENST00000612930 SPTA1P02549 2419 aa11.91□□□□□ -0.5
TSKU-205ENST00000612930 RPS28P62857 69 aaKnown RBP11.91□□□□□ -0.5
TSKU-205ENST00000612930 C9orf129Q5T035 196 aaKnown RBP11.91□□□□□ -0.5
TSKU-205ENST00000612930 PRIMA1Q86XR5 153 aa11.91□□□□□ -0.5
TSKU-205ENST00000612930 TRAV13-1A0A0B4J241 112 aa11.91□□□□□ -0.5
TSKU-205ENST00000612930 RS1O15537 224 aa11.9□□□□□ -0.5
TSKU-205ENST00000612930 PSMB8P28062 276 aa11.9□□□□□ -0.5
TSKU-205ENST00000612930 HIST2H2BCQ6DN03 193 aa11.9□□□□□ -0.5
TSKU-205ENST00000612930 HIST2H2BDQ6DRA6 164 aa11.9□□□□□ -0.5
TSKU-205ENST00000612930 IGHV3-53P01767 116 aa11.9□□□□□ -0.5
TSKU-205ENST00000612930 PIMREGQ9BSJ6 248 aa11.9□□□□□ -0.5
TSKU-205ENST00000612930 PTPRQQ9UMZ3 2332 aa11.89□□□□□ -0.51
TSKU-205ENST00000612930 RPL18AQ02543 176 aaKnown RBP11.89□□□□□ -0.51
TSKU-205ENST00000612930 SYNJ2BPP57105 145 aa11.89□□□□□ -0.51
TSKU-205ENST00000612930 RPL28P46779 137 aaKnown RBP11.88□□□□□ -0.51
TSKU-205ENST00000612930 FAM19A3Q7Z5A8 133 aa11.88□□□□□ -0.51
TSKU-205ENST00000612930 IGKV3D-7A0A0C4DH55 119 aa11.87□□□□□ -0.51
TSKU-205ENST00000612930 RBMY1BA6NDE4 496 aaKnown RBP11.87□□□□□ -0.51
TSKU-205ENST00000612930 RBMY1EA6NEQ0 496 aaKnown RBP11.87□□□□□ -0.51
TSKU-205ENST00000612930 RBMY1DP0C7P1 496 aaKnown RBP11.87□□□□□ -0.51
TSKU-205ENST00000612930 KLRB1Q12918 225 aa11.87□□□□□ -0.51
TSKU-205ENST00000612930 KIR2DL5BQ8NHK3 375 aa11.87□□□□□ -0.51
TSKU-205ENST00000612930 F5H768 121 aa11.86□□□□□ -0.51
TSKU-205ENST00000612930 ZNF415Q09FC8 603 aa11.86□□□□□ -0.51
TSKU-205ENST00000612930 C14orf132Q9NPU4 83 aa11.86□□□□□ -0.51
TSKU-205ENST00000612930 LINC00337Q8N6G1 96 aa11.86□□□□□ -0.51
TSKU-205ENST00000612930 UPK3BQ9BT76 320 aa11.86□□□□□ -0.51
TSKU-205ENST00000612930 VPS13CQ709C8 3753 aa11.85□□□□□ -0.51
TSKU-205ENST00000612930 A0A087WYN8 130 aa11.85□□□□□ -0.51
TSKU-205ENST00000612930 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.85□□□□□ -0.513e-11■■■□□ 15.5
TSKU-205ENST00000612930 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
TSKU-205ENST00000612930 DNAL4O96015 105 aa11.85□□□□□ -0.51
TSKU-205ENST00000612930 LINC00846Q9NV44 126 aa11.85□□□□□ -0.51
TSKU-205ENST00000612930 IGKV2-28A0A075B6P5 120 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 A0A087WVE0 104 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 IGKV2D-28P01615 120 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 C11orf72Q8NBR9 251 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 ZFHX2Q9C0A1 2572 aaPredicted RBP11.84□□□□□ -0.51
TSKU-205ENST00000612930 TRAV13-2A0A0B4J235 113 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 DEFB131AP59861 70 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 Q6JHZ5 121 aa11.84□□□□□ -0.51
TSKU-205ENST00000612930 PF4P02776 101 aa11.83□□□□□ -0.51
TSKU-205ENST00000612930 Q96MF0 132 aa11.83□□□□□ -0.51
TSKU-205ENST00000612930 SERP2Q8N6R1 65 aa11.83□□□□□ -0.52
TSKU-205ENST00000612930 OBSCN-AS1Q96MR7 158 aa11.83□□□□□ -0.52
TSKU-205ENST00000612930 COL12A1Q99715 3063 aa11.83□□□□□ -0.52
TSKU-205ENST00000612930 A8MTW9 85 aa11.83□□□□□ -0.52
TSKU-205ENST00000612930 CRPP02741 224 aa11.83□□□□□ -0.52
TSKU-205ENST00000612930 OR13C6PQ8NH95 151 aa11.83□□□□□ -0.52
TSKU-205ENST00000612930 OXTP01178 125 aa11.82□□□□□ -0.52
TSKU-205ENST00000612930 LINC01561Q8N1V8 128 aa11.82□□□□□ -0.52
TSKU-205ENST00000612930 TMEM258P61165 79 aa11.82□□□□□ -0.52
TSKU-205ENST00000612930 SMIM11BQ8TCY0 68 aa11.82□□□□□ -0.52
TSKU-205ENST00000612930 TMEM89A2RUT3 159 aa11.81□□□□□ -0.52
TSKU-205ENST00000612930 NTM-AS1Q6ZSK4 140 aa11.8□□□□□ -0.52
TSKU-205ENST00000612930 MIR7-3HGQ8N6C7 128 aa11.8□□□□□ -0.52
TSKU-205ENST00000612930 OVOL2Q9BRP0 275 aa11.79□□□□□ -0.52
TSKU-205ENST00000612930 SND1-IT1Q9HBX3 110 aa11.79□□□□□ -0.52
TSKU-205ENST00000612930 CEP295Q9C0D2 2601 aa11.79□□□□□ -0.52
TSKU-205ENST00000612930 DSCR8Q96T75 97 aa11.79□□□□□ -0.52
TSKU-205ENST00000612930 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
TSKU-205ENST00000612930 USP17L23D6RBM5 183 aa11.78□□□□□ -0.52
TSKU-205ENST00000612930 ATRXP46100 2492 aa11.77□□□□□ -0.52
TSKU-205ENST00000612930 AVPP01185 164 aa11.77□□□□□ -0.52
TSKU-205ENST00000612930 NCR3O14931 201 aa11.77□□□□□ -0.53
TSKU-205ENST00000612930 CRYBG3Q68DQ2 2970 aa11.76□□□□□ -0.53
TSKU-205ENST00000612930 LECT2O14960 151 aa11.75□□□□□ -0.53
TSKU-205ENST00000612930 IGHV4-59P01825 116 aa11.75□□□□□ -0.53
TSKU-205ENST00000612930 WIPF1O43516 503 aa11.75□□□□□ -0.53
TSKU-205ENST00000612930 HIVEP3Q5T1R4 2406 aa11.75□□□□□ -0.53
TSKU-205ENST00000612930 H0YGX0 51 aa11.74□□□□□ -0.53
TSKU-205ENST00000612930 SLPIP03973 132 aa11.74□□□□□ -0.53
TSKU-205ENST00000612930 CCL18P55774 89 aa11.73□□□□□ -0.53
TSKU-205ENST00000612930 COX7B2Q8TF08 81 aa11.73□□□□□ -0.53
TSKU-205ENST00000612930 CREBBPQ92793 2442 aa11.73□□□□□ -0.53
TSKU-205ENST00000612930 C19orf84I3L1E1 186 aa11.73□□□□□ -0.53
TSKU-205ENST00000612930 SS18Q15532 418 aa11.72□□□□□ -0.53
TSKU-205ENST00000612930 C4orf26Q17RF5 130 aa11.72□□□□□ -0.53
TSKU-205ENST00000612930 C10orf105Q8TEF2 133 aa11.72□□□□□ -0.53
TSKU-205ENST00000612930 LINC00158P58513 81 aa11.72□□□□□ -0.53
TSKU-205ENST00000612930 SLURP1P55000 103 aa11.71□□□□□ -0.53
TSKU-205ENST00000612930 RPL36AP83881 106 aaKnown RBP11.71□□□□□ -0.53
TSKU-205ENST00000612930 Q5XG85 94 aa11.71□□□□□ -0.53
TSKU-205ENST00000612930 RPL36ALQ969Q0 106 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms