RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 F5H697 171 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 HILS1P60008 231 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 MAPK1IP1LQ8NDC0 245 aa7.97□□□□□ -1.13
PCDHGC3-202ENST00000611950 SLC25A16P16260 332 aa7.96□□□□□ -1.13
PCDHGC3-202ENST00000611950 RPL39P62891 51 aaKnown RBP7.96□□□□□ -1.13
PCDHGC3-202ENST00000611950 RHPN1-AS1Q9BWJ2 59 aa7.96□□□□□ -1.13
PCDHGC3-202ENST00000611950 FBN1P35555 2871 aaKnown RBP7.96□□□□□ -1.14
PCDHGC3-202ENST00000611950 TRAV12-3A0A0B4J271 114 aa7.96□□□□□ -1.14
PCDHGC3-202ENST00000611950 C2orf66Q6UXQ4 117 aa7.96□□□□□ -1.14
PCDHGC3-202ENST00000611950 KRTAP1-3Q8IUG1 177 aa7.96□□□□□ -1.14
PCDHGC3-202ENST00000611950 FAM240AA0A1B0GVK7 77 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 H3BS24 57 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 HTN1P15515 57 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 HERVK_113P61574 105 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 C9orf139Q6ZV77 190 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 UPK3BQ9BT76 320 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 Q9UF83 564 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 NBEAL1Q6ZS30 2694 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 TRBV7-3A0A075B6L6 115 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 J3QL48 77 aa7.95□□□□□ -1.14
PCDHGC3-202ENST00000611950 TRAV21A0A0B4J279 112 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 LINC01549A6NIU2 74 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 FAM223BA6NKX1 122 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 INAFM1C9JVW0 142 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 GHRHP01286 108 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 CRIP2P52943 208 aaPredicted RBP7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 SCGB1D4Q6XE38 83 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 FAM223AQ8IWN6 122 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 F8VRH5 84 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 P0DMU3 169 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 FAM231AP0DMU4 169 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 FAM231CP0DMU5 169 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 RNASE3P12724 160 aaKnown RBP7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 LINC01600Q96MT4 127 aa7.94□□□□□ -1.14
PCDHGC3-202ENST00000611950 LINC01546A6NGU7 62 aa7.93□□□□□ -1.14
PCDHGC3-202ENST00000611950 IGHV3-64A0A075B6Q5 118 aa7.93□□□□□ -1.14
PCDHGC3-202ENST00000611950 OPRPNQ99935 248 aaPredicted RBP7.93□□□□□ -1.14
PCDHGC3-202ENST00000611950 IGHV4-30-2A0A087WSY4 118 aa7.93□□□□□ -1.14
PCDHGC3-202ENST00000611950 ZNF815PA8K554 130 aa7.93□□□□□ -1.14
PCDHGC3-202ENST00000611950 H3BT86 120 aa7.93□□□□□ -1.14
PCDHGC3-202ENST00000611950 CCL19Q99731 98 aa7.93□□□□□ -1.14
PCDHGC3-202ENST00000611950 TEX49A0A1B0GTD5 131 aa7.92□□□□□ -1.14
PCDHGC3-202ENST00000611950 ATOX1O00244 68 aa7.92□□□□□ -1.14
PCDHGC3-202ENST00000611950 RNF223E7ERA6 249 aa7.92□□□□□ -1.14
PCDHGC3-202ENST00000611950 SOCS3O14543 225 aa7.92□□□□□ -1.14
PCDHGC3-202ENST00000611950 PRM2P04554 102 aa7.92□□□□□ -1.14
PCDHGC3-202ENST00000611950 PLNP26678 52 aa7.92□□□□□ -1.14
PCDHGC3-202ENST00000611950 SPATA3Q8NHX4 192 aa7.92□□□□□ -1.14
PCDHGC3-202ENST00000611950 LINC01619G3V211 115 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 FP248Q71RG6 208 aaPredicted RBP7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 A6NDX4 124 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 NDUFA4O00483 81 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 IGHG2P01859 326 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 NPC2P61916 151 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 ORMDL2Q53FV1 153 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 TOMM6Q96B49 74 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 SERP1Q9Y6X1 66 aa7.91□□□□□ -1.14
PCDHGC3-202ENST00000611950 IGHV3-73A0A0B4J1V6 119 aa7.9□□□□□ -1.14
PCDHGC3-202ENST00000611950 C11orf86A6NJI1 115 aa7.9□□□□□ -1.14
PCDHGC3-202ENST00000611950 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.14
PCDHGC3-202ENST00000611950 SMIM26A0A096LP01 95 aa7.9□□□□□ -1.15
PCDHGC3-202ENST00000611950 HIST1H4AP62805 103 aaKnown RBP7.9□□□□□ -1.15
PCDHGC3-202ENST00000611950 IGHV4-4A0A075B6R2 117 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 NDUFC2-KCTD14E9PQ53 114 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 UBE2D1P51668 147 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 SPINK13Q1W4C9 94 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 NSUN5P1Q3KNT7 163 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 SUMO4Q6EEV6 95 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 MRPL55Q7Z7F7 128 aaKnown RBP7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 Q6ZRU5 148 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 C5orf38Q86SI9 138 aa7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 DAZ1Q9NQZ3 744 aaKnown RBP7.89□□□□□ -1.15
PCDHGC3-202ENST00000611950 TSHBP01222 138 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 IGHV4-59P01825 116 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 UBE2E2Q96LR5 201 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 SDHAF1A6NFY7 115 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 H3BMM0 161 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 MSMBP08118 114 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 CXCL5P42830 114 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 UBE2WQ96B02 151 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 USMG5Q96IX5 58 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 H7C2G1 150 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 LENEPQ9Y5L5 61 aa7.88□□□□□ -1.15
PCDHGC3-202ENST00000611950 TSPEAR-AS2P59090 65 aa7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 DAZ2Q13117 558 aaKnown RBP7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 RNASE13Q5GAN3 156 aaKnown RBP7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 DAZ4Q86SG3 579 aaKnown RBP7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 DAZ3Q9NR90 486 aaKnown RBP7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 H3BUA1 57 aa7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 IGLV1-40P01703 118 aa7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 ZNF22P17026 224 aaPredicted RBP7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 C11orf44Q8N8P7 122 aa7.87□□□□□ -1.15
PCDHGC3-202ENST00000611950 SYNJ2BPP57105 145 aa7.86□□□□□ -1.15
PCDHGC3-202ENST00000611950 SERP2Q8N6R1 65 aa7.86□□□□□ -1.15
PCDHGC3-202ENST00000611950 ZNF580Q9UK33 172 aa7.86□□□□□ -1.15
PCDHGC3-202ENST00000611950 TRAV12-1A0A0B4J245 112 aa7.86□□□□□ -1.15
PCDHGC3-202ENST00000611950 KNCNA6PVL3 124 aa7.86□□□□□ -1.15
PCDHGC3-202ENST00000611950 LINC00315P59091 139 aa7.86□□□□□ -1.15
PCDHGC3-202ENST00000611950 CFHR3Q02985 330 aa7.86□□□□□ -1.15
PCDHGC3-202ENST00000611950 ADARB2-AS1A8MUL3 147 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms