RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 ALKBH7Q9BT30 221 aaPredicted RBP5.72□□□□□ -1.49
SNCA-212ENST00000611107 FAM30AQ9NZY2 134 aa5.72□□□□□ -1.49
SNCA-212ENST00000611107 TRAV8-3A0A0A6YYJ7 113 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 LOC389332A0A1B0GUA5 103 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 SCO1O75880 301 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 CRPP02741 224 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 ZNF25P17030 456 aaPredicted RBP5.71□□□□□ -1.5
SNCA-212ENST00000611107 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
SNCA-212ENST00000611107 REG3AQ06141 175 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 LINC01620Q4KN68 170 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 AMMECR1LQ6DCA0 310 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 Q8N8P6 123 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 UBE2D4Q9Y2X8 147 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 TRAPPC1Q9Y5R8 145 aa5.71□□□□□ -1.5
SNCA-212ENST00000611107 IGKV2D-24A0A075B6R9 120 aa5.7□□□□□ -1.5
SNCA-212ENST00000611107 IFI27P40305 119 aaPredicted RBP5.7□□□□□ -1.5
SNCA-212ENST00000611107 FABP9Q0Z7S8 132 aa5.7□□□□□ -1.5
SNCA-212ENST00000611107 MIAQ16674 131 aa5.7□□□□□ -1.5
SNCA-212ENST00000611107 RNASEKQ6P5S7 137 aaKnown RBP5.7□□□□□ -1.5
SNCA-212ENST00000611107 KRTAP26-1Q6PEX3 210 aa5.7□□□□□ -1.5
SNCA-212ENST00000611107 Q6ZUT4 128 aa5.7□□□□□ -1.5
SNCA-212ENST00000611107 NTN5Q8WTR8 489 aaPredicted RBP5.7□□□□□ -1.5
SNCA-212ENST00000611107 BAALCQ8WXS3 180 aa5.7□□□□□ -1.5
SNCA-212ENST00000611107 FAM104AQ969W3 186 aa5.7□□□□□ -1.5
SNCA-212ENST00000611107 FLG2Q5D862 2391 aaPredicted RBP5.69□□□□□ -1.5
SNCA-212ENST00000611107 IGLV10-54A0A075B6I4 117 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 ATP6V1G1O75348 118 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 Q0VG73 95 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 Q8N1X5 172 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 Q8N814 137 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 OR5A1Q8NGJ0 315 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 C18orf32Q8TCD1 76 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 C1orf43Q9BWL3 253 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 NXT2Q9NPJ8 142 aaKnown RBP5.69□□□□□ -1.5
SNCA-212ENST00000611107 PGPEP1Q9NXJ5 209 aa5.69□□□□□ -1.5
SNCA-212ENST00000611107 IGKV3OR2-268A0A0C4DH90 116 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 LINC01546A6NGU7 62 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 COLCA2A8K830 154 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 PSCAO43653 123 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 RNASE13Q5GAN3 156 aaKnown RBP5.68□□□□□ -1.5
SNCA-212ENST00000611107 RMI2Q96E14 147 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 URB1-AS1Q96HZ7 61 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 TIMM21Q9BVV7 248 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 TM2D2Q9BX73 214 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 CDC42SE2Q9NRR3 84 aa5.68□□□□□ -1.5
SNCA-212ENST00000611107 CSDC2Q9Y534 153 aaKnown RBP5.68□□□□□ -1.5
SNCA-212ENST00000611107 K7EMI3 77 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 SMR3BP02814 79 aaPredicted RBP5.67□□□□□ -1.5
SNCA-212ENST00000611107 RAB5AP20339 215 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 GCSHP23434 173 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 ORMDL2Q53FV1 153 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 ZNF664Q8N3J9 261 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 TMEM18Q96B42 140 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 TMEM101Q96IK0 257 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 OPRPNQ99935 248 aaPredicted RBP5.67□□□□□ -1.5
SNCA-212ENST00000611107 SPANXA1Q9NS26 97 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 COX11Q9Y6N1 276 aa5.67□□□□□ -1.5
SNCA-212ENST00000611107 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.66□□□□□ -1.5
SNCA-212ENST00000611107 IGLV4-3A0A075B6K6 122 aa5.66□□□□□ -1.5
SNCA-212ENST00000611107 A0A096LNJ9 63 aa5.66□□□□□ -1.5
SNCA-212ENST00000611107 IGLV5-52A0A0A0MRZ9 124 aa5.66□□□□□ -1.5
SNCA-212ENST00000611107 CDPF1Q6NVV7 123 aa5.66□□□□□ -1.5
SNCA-212ENST00000611107 C2orf66Q6UXQ4 117 aa5.66□□□□□ -1.5
SNCA-212ENST00000611107 CYSLTR1Q9Y271 337 aa5.66□□□□□ -1.5
SNCA-212ENST00000611107 TRAV8-4A0A0B4J246 113 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 LINC00959A0A1B0GUT2 108 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 EREGO14944 169 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 TRGC2P03986 189 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 MRPS36P82909 103 aaKnown RBP5.65□□□□□ -1.5
SNCA-212ENST00000611107 SMAGPQ0VAQ4 97 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 DGAT2L7PQ6IED9 249 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 LINC00173Q6ZV60 143 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 CHCHD10Q8WYQ3 142 aaPredicted RBP5.65□□□□□ -1.5
SNCA-212ENST00000611107 PYGO1Q9Y3Y4 419 aa5.65□□□□□ -1.5
SNCA-212ENST00000611107 PKHD1L1Q86WI1 4243 aa5.64□□□□□ -1.51
SNCA-212ENST00000611107 IGIPA6NJ69 53 aa5.64□□□□□ -1.51
SNCA-212ENST00000611107 USP17L23D6RBM5 183 aa5.64□□□□□ -1.51
SNCA-212ENST00000611107 FA2HQ7L5A8 372 aa5.64□□□□□ -1.51
SNCA-212ENST00000611107 TOMM6Q96B49 74 aa5.64□□□□□ -1.51
SNCA-212ENST00000611107 AP5S1Q9NUS5 200 aa5.64□□□□□ -1.51
SNCA-212ENST00000611107 GAGE12HA6NDE8 117 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 CCL25O15444 150 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 XCL1P47992 114 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 LINC00310P59036 64 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 FOXI1Q12951 378 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 Q6ZSA8 131 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 C15orf56Q8N910 161 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 TMEM141Q96I45 108 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 TIMM17AQ99595 171 aa5.63□□□□□ -1.51
SNCA-212ENST00000611107 MYCBP2O75592 4640 aa5.62□□□□□ -1.51
SNCA-212ENST00000611107 TRAV13-1A0A0B4J241 112 aa5.62□□□□□ -1.51
SNCA-212ENST00000611107 S100A1P23297 94 aa5.62□□□□□ -1.51
SNCA-212ENST00000611107 PMCHL1Q16048 86 aa5.62□□□□□ -1.51
SNCA-212ENST00000611107 ZC2HC1BQ5TFG8 222 aa5.62□□□□□ -1.51
SNCA-212ENST00000611107 Q5VSD8 79 aa5.62□□□□□ -1.51
SNCA-212ENST00000611107 AMELXQ99217 191 aa5.62□□□□□ -1.51
SNCA-212ENST00000611107 PANO1I0J062 215 aa5.61□□□□□ -1.51
SNCA-212ENST00000611107 PRSS1P07477 247 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms