RNA–Protein interactions for RNA: ENST00000610489.1

SYNE1-240, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 1,754 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-240ENST00000610489 PRSS29PA6NIE9 313 aa7□□□□□ -1.29
SYNE1-240ENST00000610489 H7C423 109 aa7□□□□□ -1.29
SYNE1-240ENST00000610489 C18orf32Q8TCD1 76 aa7□□□□□ -1.29
SYNE1-240ENST00000610489 K7EMI3 77 aa6.99□□□□□ -1.29
SYNE1-240ENST00000610489 RBX1P62877 108 aa6.99□□□□□ -1.29
SYNE1-240ENST00000610489 Q8N976 141 aa6.99□□□□□ -1.29
SYNE1-240ENST00000610489 A0A1B0GUV1 79 aa6.98□□□□□ -1.29
SYNE1-240ENST00000610489 C20orf203Q8NBC4 194 aa6.98□□□□□ -1.29
SYNE1-240ENST00000610489 PRSS3P2Q8NHM4 247 aa6.98□□□□□ -1.29
SYNE1-240ENST00000610489 IBA57-AS1B1ANH7 110 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 FGF6P10767 208 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 LAGE3Q14657 143 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 HIST3H2BBQ8N257 126 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 KLK12Q9UKR0 248 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 DNAH17Q9UFH2 4485 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 IGLV4-60A0A075B6I1 120 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 LINC01546A6NGU7 62 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 ANGP03950 147 aaKnown RBP6.97□□□□□ -1.29
SYNE1-240ENST00000610489 ZNF25P17030 456 aaPredicted RBP6.97□□□□□ -1.29
SYNE1-240ENST00000610489 RPL39P62891 51 aaKnown RBP6.97□□□□□ -1.29
SYNE1-240ENST00000610489 Q0VG73 95 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 ORMDL2Q53FV1 153 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 RNASEKQ6P5S7 137 aaKnown RBP6.97□□□□□ -1.29
SYNE1-240ENST00000610489 MRPL52Q86TS9 123 aaKnown RBP6.97□□□□□ -1.29
SYNE1-240ENST00000610489 TMEM18Q96B42 140 aa6.97□□□□□ -1.29
SYNE1-240ENST00000610489 BTF3P20290 206 aaKnown RBP6.96□□□□□ -1.3
SYNE1-240ENST00000610489 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
SYNE1-240ENST00000610489 SMAGPQ0VAQ4 97 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 C1orf134Q5TEV5 83 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 OR5A1Q8NGJ0 315 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 URB1-AS1Q96HZ7 61 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 TIMM21Q9BVV7 248 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 UBE2D4Q9Y2X8 147 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 IFITM10A6NMD0 228 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 CRPP02741 224 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 AKR1D1P51857 326 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 LINC00269Q8N2A0 174 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 UBE2WQ96B02 151 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 TMEM101Q96IK0 257 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 Q9HAA7 133 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 PRR34Q9NV39 138 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 CYSLTR1Q9Y271 337 aa6.95□□□□□ -1.3
SYNE1-240ENST00000610489 CSDC2Q9Y534 153 aaKnown RBP6.95□□□□□ -1.3
SYNE1-240ENST00000610489 FAT2Q9NYQ8 4349 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 TRAV8-3A0A0A6YYJ7 113 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 LINC00614P0C842 121 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 DGAT2L7PQ6IED9 249 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 CFAP161Q6P656 301 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 CLPSL2Q6UWE3 100 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 ENHOQ6UWT2 76 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 C2orf66Q6UXQ4 117 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 SPANXA1Q9NS26 97 aa6.94□□□□□ -1.3
SYNE1-240ENST00000610489 G0S2P27469 103 aa6.93□□□□□ -1.3
SYNE1-240ENST00000610489 REG3AQ06141 175 aa6.93□□□□□ -1.3
SYNE1-240ENST00000610489 NFE4Q86UQ8 179 aa6.93□□□□□ -1.3
SYNE1-240ENST00000610489 LINC00518Q8N0U6 118 aa6.93□□□□□ -1.3
SYNE1-240ENST00000610489 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
SYNE1-240ENST00000610489 RTL8CO15255 209 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 S100A2P29034 98 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 MIAQ16674 131 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 Q6ZRN7 208 aaPredicted RBP6.92□□□□□ -1.3
SYNE1-240ENST00000610489 Q6ZUT4 128 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 BAGE3Q86Y29 109 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 ZNF664Q8N3J9 261 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 FAM104AQ969W3 186 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 TOMM6Q96B49 74 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 CHCHD1Q96BP2 118 aaKnown RBP6.92□□□□□ -1.3
SYNE1-240ENST00000610489 HIST1H2BLQ99880 126 aa6.92□□□□□ -1.3
SYNE1-240ENST00000610489 LINC00310P59036 64 aa6.91□□□□□ -1.3
SYNE1-240ENST00000610489 MRPS36P82909 103 aaKnown RBP6.91□□□□□ -1.3
SYNE1-240ENST00000610489 RMI2Q96E14 147 aa6.91□□□□□ -1.3
SYNE1-240ENST00000610489 PACRGQ96M98 296 aaPredicted RBP6.91□□□□□ -1.3
SYNE1-240ENST00000610489 OPRPNQ99935 248 aaPredicted RBP6.91□□□□□ -1.3
SYNE1-240ENST00000610489 IGLV4-3A0A075B6K6 122 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 IGKV2D-24A0A075B6R9 120 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 A0A096LNJ9 63 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 IGKV3OR2-268A0A0C4DH90 116 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 LINC01549A6NIU2 74 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 IGIPA6NJ69 53 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 NUPR1O60356 82 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 SMIM6P0DI80 62 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 FABP4P15090 132 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 PDZD11Q5EBL8 140 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 RNASE13Q5GAN3 156 aaKnown RBP6.9□□□□□ -1.3
SYNE1-240ENST00000610489 TM2D2Q9BX73 214 aa6.9□□□□□ -1.3
SYNE1-240ENST00000610489 TRAV8-4A0A0B4J246 113 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 SERF1AO75920 110 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 HBDP02042 147 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 NPSP0C0P6 89 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 PMCHL1Q16048 86 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 OR10D4PQ8NGN7 298 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 TIMM17AQ99595 171 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 COX11Q9Y6N1 276 aa6.9□□□□□ -1.31
SYNE1-240ENST00000610489 IGLV10-54A0A075B6I4 117 aa6.89□□□□□ -1.31
SYNE1-240ENST00000610489 HSBP1O75506 76 aa6.89□□□□□ -1.31
SYNE1-240ENST00000610489 ERASQ7Z444 233 aa6.89□□□□□ -1.31
SYNE1-240ENST00000610489 TMEM141Q96I45 108 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms