RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 Q9H8V8 135 aa9.03□□□□□ -0.96
MSH6-212ENST00000607272 IGHV3-38A0A0C4DH36 116 aa9.02□□□□□ -0.97
MSH6-212ENST00000607272 LY6DQ14210 128 aa9.02□□□□□ -0.97
MSH6-212ENST00000607272 BEAN1Q3B7T3 259 aa9.02□□□□□ -0.97
MSH6-212ENST00000607272 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.97
MSH6-212ENST00000607272 PRM2P04554 102 aa9.01□□□□□ -0.97
MSH6-212ENST00000607272 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
MSH6-212ENST00000607272 NACAE9PAV3 2078 aa9.01□□□□□ -0.97
MSH6-212ENST00000607272 IGHV3OR16-12A0A075B7B8 117 aa9.01□□□□□ -0.97
MSH6-212ENST00000607272 RBMY1BA6NDE4 496 aaKnown RBP9.01□□□□□ -0.97
MSH6-212ENST00000607272 RBMY1EA6NEQ0 496 aaKnown RBP9.01□□□□□ -0.97
MSH6-212ENST00000607272 RBMY1DP0C7P1 496 aaKnown RBP9.01□□□□□ -0.97
MSH6-212ENST00000607272 C11orf72Q8NBR9 251 aa9.01□□□□□ -0.97
MSH6-212ENST00000607272 LINC01587Q99440 93 aa9.01□□□□□ -0.97
MSH6-212ENST00000607272 MAP1AP78559 2803 aaPredicted RBP9□□□□□ -0.97
MSH6-212ENST00000607272 SPG11Q96JI7 2443 aa9□□□□□ -0.97
MSH6-212ENST00000607272 RS1O15537 224 aa9□□□□□ -0.97
MSH6-212ENST00000607272 COX6A2Q02221 97 aa9□□□□□ -0.97
MSH6-212ENST00000607272 LINC00242Q5T6M2 205 aa9□□□□□ -0.97
MSH6-212ENST00000607272 FAM19A3Q7Z5A8 133 aa9□□□□□ -0.97
MSH6-212ENST00000607272 TRACP01848 142 aa9□□□□□ -0.97
MSH6-212ENST00000607272 GNLYP22749 145 aa9□□□□□ -0.97
MSH6-212ENST00000607272 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
MSH6-212ENST00000607272 PPDPFQ9H3Y8 114 aa8.99□□□□□ -0.97
MSH6-212ENST00000607272 LINC00643Q86TS7 51 aa8.98□□□□□ -0.97
MSH6-212ENST00000607272 ZNF625Q96I27 306 aaPredicted RBP8.98□□□□□ -0.97
MSH6-212ENST00000607272 CSDC2Q9Y534 153 aaKnown RBP8.98□□□□□ -0.97
MSH6-212ENST00000607272 SMIM1B2RUZ4 78 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 INSP01308 110 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 DSCR9P59020 149 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 HERV-K104P63124 156 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 FAM110AQ9BQ89 295 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 VPREB3Q9UKI3 123 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 PRIMA1Q86XR5 153 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 TMEM126AQ9H061 195 aa8.97□□□□□ -0.97
MSH6-212ENST00000607272 A0A0U1RRA0 63 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 BAALC-AS2P0C853 105 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 SLURP1P55000 103 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 DAZ2Q13117 558 aaKnown RBP8.96□□□□□ -0.97
MSH6-212ENST00000607272 SOSTDC1Q6X4U4 206 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 DAZ4Q86SG3 579 aaKnown RBP8.96□□□□□ -0.97
MSH6-212ENST00000607272 Q8N2B8 174 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 LINC01356Q8N9X3 169 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 ZNF702PQ9H963 129 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 DAZ3Q9NR90 486 aaKnown RBP8.96□□□□□ -0.97
MSH6-212ENST00000607272 PEMTQ9UBM1 199 aa8.96□□□□□ -0.97
MSH6-212ENST00000607272 FAM236AA0A1B0GUQ0 79 aa8.96□□□□□ -0.98
MSH6-212ENST00000607272 FAM236BA0A1B0GV22 79 aa8.96□□□□□ -0.98
MSH6-212ENST00000607272 J3QLI3 93 aa8.96□□□□□ -0.98
MSH6-212ENST00000607272 CRYBG3Q68DQ2 2970 aa8.96□□□□□ -0.98
MSH6-212ENST00000607272 SMIM20Q8N5G0 67 aa8.96□□□□□ -0.98
MSH6-212ENST00000607272 FAM222AQ5U5X8 452 aa8.95□□□□□ -0.98
MSH6-212ENST00000607272 SDIM1Q6ZPB5 146 aa8.95□□□□□ -0.98
MSH6-212ENST00000607272 MAP6D1Q9H9H5 199 aa8.95□□□□□ -0.98
MSH6-212ENST00000607272 TRAV13-1A0A0B4J241 112 aa8.95□□□□□ -0.98
MSH6-212ENST00000607272 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
MSH6-212ENST00000607272 INAFM2P0DMQ5 153 aa8.94□□□□□ -0.98
MSH6-212ENST00000607272 LINC00694P0DN24 101 aa8.94□□□□□ -0.98
MSH6-212ENST00000607272 RPL36AP83881 106 aaKnown RBP8.94□□□□□ -0.98
MSH6-212ENST00000607272 HIST2H2BCQ6DN03 193 aa8.94□□□□□ -0.98
MSH6-212ENST00000607272 HIST2H2BDQ6DRA6 164 aa8.94□□□□□ -0.98
MSH6-212ENST00000607272 RPL36ALQ969Q0 106 aaKnown RBP8.94□□□□□ -0.98
MSH6-212ENST00000607272 ATP5G1P05496 136 aa8.93□□□□□ -0.98
MSH6-212ENST00000607272 DEFB136Q30KP8 78 aa8.93□□□□□ -0.98
MSH6-212ENST00000607272 SMCR5Q8TEV8 140 aa8.93□□□□□ -0.98
MSH6-212ENST00000607272 CELSR2Q9HCU4 2923 aa8.93□□□□□ -0.98
MSH6-212ENST00000607272 NCOR2Q9Y618 2525 aa8.93□□□□□ -0.98
MSH6-212ENST00000607272 TRAV13-2A0A0B4J235 113 aa8.93□□□□□ -0.98
MSH6-212ENST00000607272 F5H768 121 aa8.93□□□□□ -0.98
MSH6-212ENST00000607272 CXCL5P42830 114 aa8.92□□□□□ -0.98
MSH6-212ENST00000607272 Q6YL49 198 aa8.92□□□□□ -0.98
MSH6-212ENST00000607272 DYNLRB2Q8TF09 96 aa8.92□□□□□ -0.98
MSH6-212ENST00000607272 CDC42SE2Q9NRR3 84 aa8.92□□□□□ -0.98
MSH6-212ENST00000607272 NDUFA7O95182 113 aa8.92□□□□□ -0.98
MSH6-212ENST00000607272 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
MSH6-212ENST00000607272 K7EQD1 137 aa8.91□□□□□ -0.98
MSH6-212ENST00000607272 RPL28P46779 137 aaKnown RBP8.91□□□□□ -0.98
MSH6-212ENST00000607272 C18orf65Q6ZTR6 163 aa8.91□□□□□ -0.98
MSH6-212ENST00000607272 OVOL2Q9BRP0 275 aa8.91□□□□□ -0.98
MSH6-212ENST00000607272 DEFB114Q30KQ6 69 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 NTM-AS1Q6ZSK4 140 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 FAM218AQ96MZ4 157 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 XCL2Q9UBD3 114 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 C22orf24Q9Y442 160 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 CHD8Q9HCK8 2581 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 IL17DQ8TAD2 202 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 PLA2G2DQ9UNK4 145 aa8.9□□□□□ -0.98
MSH6-212ENST00000607272 CRPP02741 224 aa8.89□□□□□ -0.99
MSH6-212ENST00000607272 C5orf38Q86SI9 138 aa8.89□□□□□ -0.99
MSH6-212ENST00000607272 C3orf22Q8N5N4 141 aa8.89□□□□□ -0.99
MSH6-212ENST00000607272 C4orf3Q8WVX3 66 aa8.89□□□□□ -0.99
MSH6-212ENST00000607272 UQCRQO14949 82 aa8.89□□□□□ -0.99
MSH6-212ENST00000607272 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
MSH6-212ENST00000607272 UBE2L6O14933 153 aa8.88□□□□□ -0.99
MSH6-212ENST00000607272 GAGE2AQ6NT46 116 aa8.88□□□□□ -0.99
MSH6-212ENST00000607272 USP9YO00507 2555 aaPredicted RBP8.88□□□□□ -0.99
MSH6-212ENST00000607272 SPTBN4Q9H254 2564 aa8.88□□□□□ -0.99
MSH6-212ENST00000607272 A0A096LNT2 108 aa8.87□□□□□ -0.99
MSH6-212ENST00000607272 FSHBP01225 129 aa8.87□□□□□ -0.99
MSH6-212ENST00000607272 C9orf153Q5TBE3 101 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms