RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 DGAT2L7PQ6IED9 249 aa9.52□□□□□ -0.89
CTSA-211ENST00000606066 MRPL52Q86TS9 123 aaKnown RBP9.52□□□□□ -0.89
CTSA-211ENST00000606066 OR5A1Q8NGJ0 315 aa9.52□□□□□ -0.89
CTSA-211ENST00000606066 NXT2Q9NPJ8 142 aaKnown RBP9.52□□□□□ -0.89
CTSA-211ENST00000606066 TRAPPC1Q9Y5R8 145 aa9.52□□□□□ -0.89
CTSA-211ENST00000606066 TRAV8-4A0A0B4J246 113 aa9.51□□□□□ -0.89
CTSA-211ENST00000606066 K7EMI3 77 aa9.51□□□□□ -0.89
CTSA-211ENST00000606066 CLPSL2Q6UWE3 100 aa9.51□□□□□ -0.89
CTSA-211ENST00000606066 Q8N8P6 123 aa9.51□□□□□ -0.89
CTSA-211ENST00000606066 A0A087WTM6 91 aa9.5□□□□□ -0.89
CTSA-211ENST00000606066 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
CTSA-211ENST00000606066 ORMDL2Q53FV1 153 aa9.49□□□□□ -0.89
CTSA-211ENST00000606066 CBLN2Q8IUK8 224 aa9.49□□□□□ -0.89
CTSA-211ENST00000606066 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
CTSA-211ENST00000606066 ALKBH7Q9BT30 221 aaPredicted RBP9.49□□□□□ -0.89
CTSA-211ENST00000606066 TIMM21Q9BVV7 248 aa9.49□□□□□ -0.89
CTSA-211ENST00000606066 KRTAP4-5Q9BYR2 181 aa9.49□□□□□ -0.89
CTSA-211ENST00000606066 UBE2D4Q9Y2X8 147 aa9.49□□□□□ -0.89
CTSA-211ENST00000606066 HERC1Q15751 4861 aa9.48□□□□□ -0.89
CTSA-211ENST00000606066 G0S2P27469 103 aa9.48□□□□□ -0.89
CTSA-211ENST00000606066 ZNF664Q8N3J9 261 aa9.48□□□□□ -0.89
CTSA-211ENST00000606066 PRSS3P2Q8NHM4 247 aa9.48□□□□□ -0.89
CTSA-211ENST00000606066 CDC42SE2Q9NRR3 84 aa9.48□□□□□ -0.89
CTSA-211ENST00000606066 IGKV3OR2-268A0A0C4DH90 116 aa9.47□□□□□ -0.89
CTSA-211ENST00000606066 LRCOL1A6NCL2 159 aa9.47□□□□□ -0.89
CTSA-211ENST00000606066 IFI27P40305 119 aaPredicted RBP9.47□□□□□ -0.89
CTSA-211ENST00000606066 SPATA12Q7Z6I5 190 aa9.47□□□□□ -0.89
CTSA-211ENST00000606066 SPANXA1Q9NS26 97 aa9.47□□□□□ -0.89
CTSA-211ENST00000606066 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
CTSA-211ENST00000606066 APOBP04114 4563 aaKnown RBP9.46□□□□□ -0.89
CTSA-211ENST00000606066 IGLV10-54A0A075B6I4 117 aa9.46□□□□□ -0.9
CTSA-211ENST00000606066 RPL39P62891 51 aaKnown RBP9.45□□□□□ -0.9
CTSA-211ENST00000606066 MAPKAPK5-AS1Q8N8E1 139 aa9.45□□□□□ -0.9
CTSA-211ENST00000606066 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
CTSA-211ENST00000606066 CYSLTR1Q9Y271 337 aa9.45□□□□□ -0.9
CTSA-211ENST00000606066 SS18Q15532 418 aa9.44□□□□□ -0.9
CTSA-211ENST00000606066 C14orf177Q52M58 125 aa9.44□□□□□ -0.9
CTSA-211ENST00000606066 Q8N814 137 aa9.44□□□□□ -0.9
CTSA-211ENST00000606066 PYGO1Q9Y3Y4 419 aa9.44□□□□□ -0.9
CTSA-211ENST00000606066 LINC00959A0A1B0GUT2 108 aa9.43□□□□□ -0.9
CTSA-211ENST00000606066 CCL25O15444 150 aa9.43□□□□□ -0.9
CTSA-211ENST00000606066 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
CTSA-211ENST00000606066 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
CTSA-211ENST00000606066 KRTAP26-1Q6PEX3 210 aa9.43□□□□□ -0.9
CTSA-211ENST00000606066 C2orf66Q6UXQ4 117 aa9.43□□□□□ -0.9
CTSA-211ENST00000606066 FA2HQ7L5A8 372 aa9.43□□□□□ -0.9
CTSA-211ENST00000606066 NTN5Q8WTR8 489 aaPredicted RBP9.43□□□□□ -0.9
CTSA-211ENST00000606066 LINC01549A6NIU2 74 aa9.42□□□□□ -0.9
CTSA-211ENST00000606066 C16orf90A8MZG2 172 aa9.42□□□□□ -0.9
CTSA-211ENST00000606066 LECT2O14960 151 aa9.42□□□□□ -0.9
CTSA-211ENST00000606066 CDK2AP2O75956 126 aa9.42□□□□□ -0.9
CTSA-211ENST00000606066 KRTAP10-2P60368 255 aa9.42□□□□□ -0.9
CTSA-211ENST00000606066 Q6ZUT4 128 aa9.42□□□□□ -0.9
CTSA-211ENST00000606066 CHCHD10Q8WYQ3 142 aaPredicted RBP9.42□□□□□ -0.9
CTSA-211ENST00000606066 GAGE12HA6NDE8 117 aa9.41□□□□□ -0.9
CTSA-211ENST00000606066 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
CTSA-211ENST00000606066 C1orf196B1AJZ1 125 aa9.41□□□□□ -0.9
CTSA-211ENST00000606066 NPSP0C0P6 89 aa9.41□□□□□ -0.9
CTSA-211ENST00000606066 RAB5BP61020 215 aa9.41□□□□□ -0.9
CTSA-211ENST00000606066 XCL1P47992 114 aa9.4□□□□□ -0.9
CTSA-211ENST00000606066 WFDC2Q14508 124 aa9.4□□□□□ -0.9
CTSA-211ENST00000606066 RNASE13Q5GAN3 156 aaKnown RBP9.4□□□□□ -0.9
CTSA-211ENST00000606066 CFAP161Q6P656 301 aa9.4□□□□□ -0.9
CTSA-211ENST00000606066 Q6ZN92 141 aa9.4□□□□□ -0.9
CTSA-211ENST00000606066 C18orf32Q8TCD1 76 aa9.4□□□□□ -0.9
CTSA-211ENST00000606066 AP5S1Q9NUS5 200 aa9.4□□□□□ -0.9
CTSA-211ENST00000606066 IGLV5-52A0A0A0MRZ9 124 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 TRAV13-1A0A0B4J241 112 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 COLCA2A8K830 154 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 USP17L23D6RBM5 183 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 LINC00614P0C842 121 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 CD164L2Q6UWJ8 174 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 TOMM6Q96B49 74 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 TMEM141Q96I45 108 aa9.39□□□□□ -0.91
CTSA-211ENST00000606066 IGLV4-3A0A075B6K6 122 aa9.38□□□□□ -0.91
CTSA-211ENST00000606066 TEX43Q6ZNM6 134 aa9.38□□□□□ -0.91
CTSA-211ENST00000606066 OPRPNQ99935 248 aaPredicted RBP9.38□□□□□ -0.91
CTSA-211ENST00000606066 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.37□□□□□ -0.91
CTSA-211ENST00000606066 IGIPA6NJ69 53 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 TRGC2P03986 189 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 S100A1P23297 94 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 FOXI1Q12951 378 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 FAM104AQ969W3 186 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 TIMM17AQ99595 171 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 C2orf88Q9BSF0 95 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 VCX2Q9H322 139 aa9.37□□□□□ -0.91
CTSA-211ENST00000606066 SCO1O75880 301 aa9.36□□□□□ -0.91
CTSA-211ENST00000606066 ERASQ7Z444 233 aa9.36□□□□□ -0.91
CTSA-211ENST00000606066 SCGB3A1Q96QR1 104 aa9.36□□□□□ -0.91
CTSA-211ENST00000606066 GCSHP23434 173 aa9.35□□□□□ -0.91
CTSA-211ENST00000606066 FUSP35637 526 aaKnown RBP eCLIP9.35□□□□□ -0.91
CTSA-211ENST00000606066 hDV102S1A0JD36 115 aa9.34□□□□□ -0.91
CTSA-211ENST00000606066 Q8N1X5 172 aa9.34□□□□□ -0.91
CTSA-211ENST00000606066 CHCHD1Q96BP2 118 aaKnown RBP9.34□□□□□ -0.91
CTSA-211ENST00000606066 AMELXQ99217 191 aa9.34□□□□□ -0.91
CTSA-211ENST00000606066 IGHV1-58A0A0C4DH39 117 aa9.33□□□□□ -0.92
CTSA-211ENST00000606066 COX7A2LO14548 114 aa9.33□□□□□ -0.92
CTSA-211ENST00000606066 HBDP02042 147 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms