RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 ZNF292O60281 2723 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 RIF1Q5UIP0 2472 aaKnown RBP3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV4-4A0A075B6R2 117 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV7-81A0A0B4J1V7 117 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 B4DSR2 109 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 BAALC-AS2P0C853 105 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 CXCL6P80162 114 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 C22orf24Q9Y442 160 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 ASCC3Q8N3C0 2202 aaKnown RBP3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 PCNX2A6NKB5 2137 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 PRRC2AP48634 2157 aaKnown RBP3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 IGLV4-69A0A075B6H9 119 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV4OR15-8A0A075B7B6 117 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 IGKV3D-20A0A0C4DH25 116 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 M0R1W7 72 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 C8orf17Q9NRJ1 99 aa3.5□□□□□ -1.85
SPTBN1-206ENST00000602898 CFAP54Q96N23 3096 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 KNTC1P50748 2209 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 CRIP1P50238 77 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 RPL39P5Q59GN2 51 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 C9orf66Q5T8R8 295 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 OBSCN-AS1Q96MR7 158 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 SEC16AO15027 2179 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 CNTRLQ7Z7A1 2325 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 CACNA1GO43497 2377 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV3-16A0A0C4DH30 117 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 NTN3O00634 580 aaPredicted RBP3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 ERC2-IT1O76042 136 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 UBE2AP49459 152 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 PRCDQ00LT1 54 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 SNURFQ9Y675 71 aa3.49□□□□□ -1.85
SPTBN1-206ENST00000602898 IGLV3-9A0A075B6K5 115 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 LY6G6EA0A0G2JKS1 128 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 A6NN06 94 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 LINC01547P58512 204 aaPredicted RBP3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 C10orf25Q5T742 122 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 ATP11AUNQ6ZP68 121 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 CSNK1G2-AS1Q8NCQ2 148 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 SMIM2Q9BVW6 85 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 IGKV1D-37A0A075B6S9 117 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 IGLV5-39A0A0G2JS06 123 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 GAS8-AS1O95177 125 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 IGLV3-19P01714 112 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 DSCR9P59020 149 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 MRPS21P82921 87 aaKnown RBP3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 LUZP6Q538Z0 58 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 SUMO4Q6EEV6 95 aa3.48□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV3-64DA0A0J9YX35 117 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 TRBV7-4A0A0J9YYF1 115 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 PRAC2D3DTV9 90 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 IGLV2-23P01705 113 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 DEFB124Q8NES8 71 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 KRTAP9-9Q9BYP9 154 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 TMEM14CQ9P0S9 112 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 C5orf42Q9H799 3197 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 GVINP1Q7Z2Y8 2422 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 IGHV5-10-1A0A0J9YXX1 117 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 LHBP01229 141 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 SYCNQ0VAF6 134 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 MAP1BP46821 2468 aaKnown RBP3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 TRIOO75962 3097 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 hDV103S1A0JD37 113 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 FSHBP01225 129 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 CCL4P13236 92 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 MIAQ16674 131 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 C2orf66Q6UXQ4 117 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 LYPD1Q8N2G4 141 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 SPTSSBQ8NFR3 76 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 LINC00476Q8WZB0 136 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 LITAFQ99732 161 aa3.47□□□□□ -1.85
SPTBN1-206ENST00000602898 Q6ZS52 159 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 Q8N6K4 173 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 TMEM141Q96I45 108 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 RETNLBQ9BQ08 111 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 NCOR2Q9Y618 2525 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 EP300Q09472 2414 aaPredicted RBP3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 IGLV3-12A0A075B6K2 115 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 C10orf142B7Z368 130 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 LY6G6DO95868 133 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 Q6ZTC4 211 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 LINC00269Q8N2A0 174 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 MRPL36Q9P0J6 103 aaKnown RBP3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 ARHGAP32A7KAX9 2087 aa3.46□□□□□ -1.86
SPTBN1-206ENST00000602898 TPRP12270 2363 aaKnown RBP3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 EPG5Q9HCE0 2579 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 A0A087WW49 117 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 TRAV12-3A0A0B4J271 114 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 SPTY2D1-AS1A0A0U1RR47 76 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 SOCS3O14543 225 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 TRGV3P03979 118 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 GPR179Q6PRD1 2367 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 TRAV22A0A0B4J277 110 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 ERHP84090 104 aaKnown RBP3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 ENHOQ6UWT2 76 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 C20orf203Q8NBC4 194 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 B9D2Q9BPU9 175 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 FREM1Q5H8C1 2179 aa3.45□□□□□ -1.86
SPTBN1-206ENST00000602898 SPEGQ15772 3267 aa3.44□□□□□ -1.86
SPTBN1-206ENST00000602898 ZGRF1Q86YA3 2104 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms