RNA–Protein interactions for RNA: ENST00000602086.5

ZNF548-212, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-212ENST00000602086 FAM104AQ969W3 186 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 VAMP8Q9BV40 100 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 VCX2Q9H322 139 aa9.97□□□□□ -0.81
ZNF548-212ENST00000602086 DPM2O94777 84 aa9.96□□□□□ -0.82
ZNF548-212ENST00000602086 CHTOPQ9Y3Y2 248 aaKnown RBP9.96□□□□□ -0.82
ZNF548-212ENST00000602086 A0A1B0GUV1 79 aa9.95□□□□□ -0.82
ZNF548-212ENST00000602086 IGKCP01834 107 aa9.95□□□□□ -0.82
ZNF548-212ENST00000602086 LELP1Q5T871 98 aa9.95□□□□□ -0.82
ZNF548-212ENST00000602086 DGAT2L7PQ6IED9 249 aa9.95□□□□□ -0.82
ZNF548-212ENST00000602086 C15orf53Q8NAA6 179 aa9.95□□□□□ -0.82
ZNF548-212ENST00000602086 TMEM101Q96IK0 257 aa9.95□□□□□ -0.82
ZNF548-212ENST00000602086 MRPL35Q9NZE8 188 aaKnown RBP9.95□□□□□ -0.82
ZNF548-212ENST00000602086 AMMECR1LQ6DCA0 310 aa9.94□□□□□ -0.82
ZNF548-212ENST00000602086 OR5A1Q8NGJ0 315 aa9.94□□□□□ -0.82
ZNF548-212ENST00000602086 WWC2-AS2Q96NR7 200 aa9.94□□□□□ -0.82
ZNF548-212ENST00000602086 CDC42SE2Q9NRR3 84 aa9.94□□□□□ -0.82
ZNF548-212ENST00000602086 HSBP1L1C9JCN9 74 aa9.93□□□□□ -0.82
ZNF548-212ENST00000602086 NFE4Q86UQ8 179 aa9.93□□□□□ -0.82
ZNF548-212ENST00000602086 ZNF664Q8N3J9 261 aa9.93□□□□□ -0.82
ZNF548-212ENST00000602086 OPRPNQ99935 248 aaPredicted RBP9.93□□□□□ -0.82
ZNF548-212ENST00000602086 PMCHL2Q9BQD1 86 aa9.93□□□□□ -0.82
ZNF548-212ENST00000602086 C2orf88Q9BSF0 95 aa9.93□□□□□ -0.82
ZNF548-212ENST00000602086 CHCHD5Q9BSY4 110 aa9.93□□□□□ -0.82
ZNF548-212ENST00000602086 COL7A1Q02388 2944 aa9.93□□□□□ -0.82
ZNF548-212ENST00000602086 IGLC3P0DOY3 106 aa9.92□□□□□ -0.82
ZNF548-212ENST00000602086 CEMP1Q6PRD7 247 aaPredicted RBP9.92□□□□□ -0.82
ZNF548-212ENST00000602086 LYPD5Q6UWN5 251 aa9.92□□□□□ -0.82
ZNF548-212ENST00000602086 Q6ZUT4 128 aa9.92□□□□□ -0.82
ZNF548-212ENST00000602086 FAM19A3Q7Z5A8 133 aa9.92□□□□□ -0.82
ZNF548-212ENST00000602086 ATOH7Q8N100 152 aa9.92□□□□□ -0.82
ZNF548-212ENST00000602086 IGLV4-69A0A075B6H9 119 aa9.91□□□□□ -0.82
ZNF548-212ENST00000602086 GAGE6Q13070 117 aa9.91□□□□□ -0.82
ZNF548-212ENST00000602086 SEC11AP67812 179 aa9.9□□□□□ -0.82
ZNF548-212ENST00000602086 SPATA45Q537H7 98 aa9.9□□□□□ -0.82
ZNF548-212ENST00000602086 PAM16Q9Y3D7 125 aa9.9□□□□□ -0.82
ZNF548-212ENST00000602086 TRAV8-6A0A0B4J262 113 aa9.89□□□□□ -0.83
ZNF548-212ENST00000602086 TINCRA0A1B0GVN0 87 aa9.89□□□□□ -0.83
ZNF548-212ENST00000602086 TSTD3H0UI37 97 aa9.89□□□□□ -0.83
ZNF548-212ENST00000602086 UBE2D1P51668 147 aa9.89□□□□□ -0.83
ZNF548-212ENST00000602086 hDV102S1A0JD36 115 aa9.88□□□□□ -0.83
ZNF548-212ENST00000602086 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
ZNF548-212ENST00000602086 CCL25O15444 150 aa9.88□□□□□ -0.83
ZNF548-212ENST00000602086 RBX1P62877 108 aa9.88□□□□□ -0.83
ZNF548-212ENST00000602086 ZC2HC1BQ5TFG8 222 aa9.88□□□□□ -0.83
ZNF548-212ENST00000602086 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
ZNF548-212ENST00000602086 IGLV4-60A0A075B6I1 120 aa9.86□□□□□ -0.83
ZNF548-212ENST00000602086 IGLV5-45A0A087WSX0 123 aa9.86□□□□□ -0.83
ZNF548-212ENST00000602086 TMEM262E9PQX1 116 aa9.86□□□□□ -0.83
ZNF548-212ENST00000602086 CHAC1Q9BUX1 264 aa9.86□□□□□ -0.83
ZNF548-212ENST00000602086 STAB2Q8WWQ8 2551 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 A0A0J9YXV3 536 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 HERVK_113P61574 105 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 HERVK_113P63121 156 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 ESRGQ1W209 222 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 ANKRD39Q53RE8 183 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 MPV17L2Q567V2 206 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 RNASE13Q5GAN3 156 aaKnown RBP9.85□□□□□ -0.83
ZNF548-212ENST00000602086 STPG4Q8N801 248 aa9.85□□□□□ -0.83
ZNF548-212ENST00000602086 E9PLD3 99 aa9.84□□□□□ -0.83
ZNF548-212ENST00000602086 ZNF22P17026 224 aaPredicted RBP9.84□□□□□ -0.83
ZNF548-212ENST00000602086 TCTAP57738 103 aa9.84□□□□□ -0.83
ZNF548-212ENST00000602086 LINC00242Q5T6M2 205 aa9.84□□□□□ -0.83
ZNF548-212ENST00000602086 DLEU1O43261 78 aa9.83□□□□□ -0.84
ZNF548-212ENST00000602086 COX8AP10176 69 aa9.83□□□□□ -0.84
ZNF548-212ENST00000602086 MIEN1Q9BRT3 115 aa9.83□□□□□ -0.84
ZNF548-212ENST00000602086 PRO1933Q9H354 126 aa9.83□□□□□ -0.84
ZNF548-212ENST00000602086 GEMIN7Q9H840 131 aaKnown RBP9.83□□□□□ -0.84
ZNF548-212ENST00000602086 UQCR10Q9UDW1 63 aa9.83□□□□□ -0.84
ZNF548-212ENST00000602086 TMEM223A0PJW6 202 aa9.82□□□□□ -0.84
ZNF548-212ENST00000602086 NUPR2A6NF83 97 aa9.82□□□□□ -0.84
ZNF548-212ENST00000602086 IGLL5B9A064 214 aa9.82□□□□□ -0.84
ZNF548-212ENST00000602086 TMEM170BQ5T4T1 132 aa9.82□□□□□ -0.84
ZNF548-212ENST00000602086 MRPS16Q9Y3D3 137 aaKnown RBP9.82□□□□□ -0.84
ZNF548-212ENST00000602086 RYR2Q92736 4967 aa9.81□□□□□ -0.84
ZNF548-212ENST00000602086 LINC00959A0A1B0GUT2 108 aa9.81□□□□□ -0.84
ZNF548-212ENST00000602086 H3BRM9 83 aa9.81□□□□□ -0.84
ZNF548-212ENST00000602086 UPK3BQ9BT76 320 aa9.81□□□□□ -0.84
ZNF548-212ENST00000602086 TRAV13-1A0A0B4J241 112 aa9.8□□□□□ -0.84
ZNF548-212ENST00000602086 CCL18P55774 89 aa9.8□□□□□ -0.84
ZNF548-212ENST00000602086 LINC01556Q5JQF7 62 aa9.8□□□□□ -0.84
ZNF548-212ENST00000602086 SLC25A34Q6PIV7 304 aa9.8□□□□□ -0.84
ZNF548-212ENST00000602086 BOD1L2Q8IYS8 172 aa9.8□□□□□ -0.84
ZNF548-212ENST00000602086 PRR34Q9NV39 138 aa9.8□□□□□ -0.84
ZNF548-212ENST00000602086 KLK5Q9Y337 293 aaPredicted RBP9.8□□□□□ -0.84
ZNF548-212ENST00000602086 DYNC2H1Q8NCM8 4307 aaKnown RBP9.79□□□□□ -0.84
ZNF548-212ENST00000602086 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
ZNF548-212ENST00000602086 ANGP03950 147 aaKnown RBP9.79□□□□□ -0.84
ZNF548-212ENST00000602086 DNAH10OSP0CZ25 163 aa9.79□□□□□ -0.84
ZNF548-212ENST00000602086 DDTP30046 118 aa9.79□□□□□ -0.84
ZNF548-212ENST00000602086 SS18Q15532 418 aa9.79□□□□□ -0.84
ZNF548-212ENST00000602086 LINC01561Q8N1V8 128 aa9.79□□□□□ -0.84
ZNF548-212ENST00000602086 C14orf144Q96I85 54 aa9.79□□□□□ -0.84
ZNF548-212ENST00000602086 LEPROTO15243 131 aa9.78□□□□□ -0.84
ZNF548-212ENST00000602086 REG3AQ06141 175 aa9.78□□□□□ -0.84
ZNF548-212ENST00000602086 WFDC10BQ8IUB3 73 aa9.78□□□□□ -0.84
ZNF548-212ENST00000602086 LINC00469Q8N7U9 141 aa9.78□□□□□ -0.84
ZNF548-212ENST00000602086 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
ZNF548-212ENST00000602086 CDKN2A-AS1Q9UH64 79 aa9.78□□□□□ -0.84
ZNF548-212ENST00000602086 APLNQ9ULZ1 77 aa9.78□□□□□ -0.84
ZNF548-212ENST00000602086 IGHV3OR16-9A0A0B4J2B5 98 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms