RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 DNAH3Q8TD57 4116 aa14.11□□□□□ -0.15
PNKP-214ENST00000600573 HIGD1BQ9P298 99 aa14.1□□□□□ -0.15
PNKP-214ENST00000600573 HSD52Q0P140 79 aa14.09□□□□□ -0.15
PNKP-214ENST00000600573 BVES-AS1Q5T3Y7 98 aa14.09□□□□□ -0.15
PNKP-214ENST00000600573 TRAV8-6A0A0B4J262 113 aa14.08□□□□□ -0.15
PNKP-214ENST00000600573 PAX4O43316 350 aa14.08□□□□□ -0.15
PNKP-214ENST00000600573 MRPS36P82909 103 aaKnown RBP14.08□□□□□ -0.15
PNKP-214ENST00000600573 CSDC2Q9Y534 153 aaKnown RBP14.08□□□□□ -0.15
PNKP-214ENST00000600573 FAM104AQ969W3 186 aa14.08□□□□□ -0.16
PNKP-214ENST00000600573 SPATA25Q9BR10 227 aa14.08□□□□□ -0.16
PNKP-214ENST00000600573 TTTY13Q9BZ97 58 aa14.08□□□□□ -0.16
PNKP-214ENST00000600573 CELA1Q9UNI1 258 aa14.08□□□□□ -0.16
PNKP-214ENST00000600573 TRBV25-1A0A075B6N4 114 aa14.07□□□□□ -0.16
PNKP-214ENST00000600573 LOC100131303A0A0U1RQF7 123 aa14.07□□□□□ -0.16
PNKP-214ENST00000600573 GYPEP15421 78 aa14.07□□□□□ -0.16
PNKP-214ENST00000600573 TMEM170BQ5T4T1 132 aa14.07□□□□□ -0.16
PNKP-214ENST00000600573 CEMP1Q6PRD7 247 aaPredicted RBP14.07□□□□□ -0.16
PNKP-214ENST00000600573 Q6ZUT4 128 aa14.07□□□□□ -0.16
PNKP-214ENST00000600573 K7EIL1 84 aa14.06□□□□□ -0.16
PNKP-214ENST00000600573 SH2D6Q7Z4S9 175 aa14.06□□□□□ -0.16
PNKP-214ENST00000600573 TMEM243Q9BU79 118 aa14.06□□□□□ -0.16
PNKP-214ENST00000600573 DGAT2L7PQ6IED9 249 aa14.05□□□□□ -0.16
PNKP-214ENST00000600573 NTM-AS1Q6ZSK4 140 aa14.05□□□□□ -0.16
PNKP-214ENST00000600573 SBSPONQ8IVN8 264 aa14.05□□□□□ -0.16
PNKP-214ENST00000600573 ATP6V0E2Q8NHE4 81 aa14.05□□□□□ -0.16
PNKP-214ENST00000600573 A0A0J9YXV3 536 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 MYMXA0A1B0GTQ4 84 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 MAPKAPK5-AS1Q8N8E1 139 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 PKD1L1Q8TDX9 2849 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 TRAV26-1A0A087WT03 109 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 UBE2L6O14933 153 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 ZNF22P17026 224 aaPredicted RBP14.04□□□□□ -0.16
PNKP-214ENST00000600573 DEFB121Q5J5C9 76 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 RETNQ9HD89 108 aa14.04□□□□□ -0.16
PNKP-214ENST00000600573 TRBV6-8A0A0A6YYG3 113 aa14.03□□□□□ -0.16
PNKP-214ENST00000600573 F5H768 121 aa14.03□□□□□ -0.16
PNKP-214ENST00000600573 SEC11AP67812 179 aa14.03□□□□□ -0.16
PNKP-214ENST00000600573 TM2D3Q9BRN9 247 aa14.03□□□□□ -0.16
PNKP-214ENST00000600573 C12orf74Q32Q52 190 aa14.02□□□□□ -0.16
PNKP-214ENST00000600573 RNASE13Q5GAN3 156 aaKnown RBP14.02□□□□□ -0.16
PNKP-214ENST00000600573 TMEM223A0PJW6 202 aa14.01□□□□□ -0.17
PNKP-214ENST00000600573 ZNF25P17030 456 aaPredicted RBP14.01□□□□□ -0.17
PNKP-214ENST00000600573 VSIG2Q96IQ7 327 aa14.01□□□□□ -0.17
PNKP-214ENST00000600573 TINCRA0A1B0GVN0 87 aa14.01□□□□□ -0.17
PNKP-214ENST00000600573 ZNF815PA8K554 130 aa14.01□□□□□ -0.17
PNKP-214ENST00000600573 H3BNG1 76 aa14.01□□□□□ -0.17
PNKP-214ENST00000600573 MRPL23Q16540 153 aaKnown RBP14.01□□□□□ -0.17
PNKP-214ENST00000600573 ORAOV1Q8WV07 137 aa14.01□□□□□ -0.17
PNKP-214ENST00000600573 TMEM101Q96IK0 257 aa14.01□□□□□ -0.17
PNKP-214ENST00000600573 NBEAL2Q6ZNJ1 2754 aa13.99□□□□□ -0.17
PNKP-214ENST00000600573 LEPROTO15243 131 aa13.99□□□□□ -0.17
PNKP-214ENST00000600573 AMMECR1LQ6DCA0 310 aa13.99□□□□□ -0.17
PNKP-214ENST00000600573 OR5A1Q8NGJ0 315 aa13.99□□□□□ -0.17
PNKP-214ENST00000600573 UBE2D1P51668 147 aa13.98□□□□□ -0.17
PNKP-214ENST00000600573 TAL2Q16559 108 aa13.98□□□□□ -0.17
PNKP-214ENST00000600573 PLEKHB2Q96CS7 222 aa13.98□□□□□ -0.17
PNKP-214ENST00000600573 LGALS3P17931 250 aaKnown RBP13.97□□□□□ -0.17
PNKP-214ENST00000600573 ICOSQ9Y6W8 199 aa13.97□□□□□ -0.17
PNKP-214ENST00000600573 A6NDN8 102 aa13.97□□□□□ -0.17
PNKP-214ENST00000600573 PRB2P02812 416 aaPredicted RBP13.97□□□□□ -0.17
PNKP-214ENST00000600573 A0A0J9YWU9 116 aa13.96□□□□□ -0.17
PNKP-214ENST00000600573 A0A0J9YY99 117 aa13.96□□□□□ -0.17
PNKP-214ENST00000600573 J3QQQ9 107 aa13.96□□□□□ -0.17
PNKP-214ENST00000600573 TSPEAR-AS2P59090 65 aa13.96□□□□□ -0.17
PNKP-214ENST00000600573 C11orf45Q8TAV5 145 aa13.96□□□□□ -0.17
PNKP-214ENST00000600573 GEMIN7Q9H840 131 aaKnown RBP13.96□□□□□ -0.17
PNKP-214ENST00000600573 HTN3P15516 51 aa13.95□□□□□ -0.18
PNKP-214ENST00000600573 TIRAPP58753 221 aa13.95□□□□□ -0.18
PNKP-214ENST00000600573 CHCHD5Q9BSY4 110 aa13.95□□□□□ -0.18
PNKP-214ENST00000600573 CDC42SE2Q9NRR3 84 aa13.95□□□□□ -0.18
PNKP-214ENST00000600573 GCSHP23434 173 aa13.94□□□□□ -0.18
PNKP-214ENST00000600573 SCGB1D4Q6XE38 83 aa13.94□□□□□ -0.18
PNKP-214ENST00000600573 FAM19A3Q7Z5A8 133 aa13.93□□□□□ -0.18
PNKP-214ENST00000600573 LINC00469Q8N7U9 141 aa13.93□□□□□ -0.18
PNKP-214ENST00000600573 COX11Q9Y6N1 276 aa13.93□□□□□ -0.18
PNKP-214ENST00000600573 FBN3Q75N90 2809 aa13.93□□□□□ -0.18
PNKP-214ENST00000600573 CEND1Q8N111 149 aa13.93□□□□□ -0.18
PNKP-214ENST00000600573 IGLV5-45A0A087WSX0 123 aa13.92□□□□□ -0.18
PNKP-214ENST00000600573 A0A1B0GUV1 79 aa13.92□□□□□ -0.18
PNKP-214ENST00000600573 H3BRM9 83 aa13.92□□□□□ -0.18
PNKP-214ENST00000600573 HERVK_113P63121 156 aa13.92□□□□□ -0.18
PNKP-214ENST00000600573 GAGE6Q13070 117 aa13.92□□□□□ -0.18
PNKP-214ENST00000600573 HIST1H4GQ99525 98 aa13.92□□□□□ -0.18
PNKP-214ENST00000600573 TAX1BP3O14907 124 aa13.91□□□□□ -0.18
PNKP-214ENST00000600573 MRAPQ8TCY5 172 aa13.91□□□□□ -0.18
PNKP-214ENST00000600573 TM2D2Q9BX73 214 aa13.91□□□□□ -0.18
PNKP-214ENST00000600573 IGHV3-64A0A075B6Q5 118 aa13.9□□□□□ -0.18
PNKP-214ENST00000600573 Q6ZTC4 211 aa13.9□□□□□ -0.18
PNKP-214ENST00000600573 IGHV1-58A0A0C4DH39 117 aa13.9□□□□□ -0.19
PNKP-214ENST00000600573 A0A096LPF7 62 aa13.89□□□□□ -0.19
PNKP-214ENST00000600573 IGHV3-30-3P0DP02 117 aa13.89□□□□□ -0.19
PNKP-214ENST00000600573 FXYD2P54710 66 aa13.89□□□□□ -0.19
PNKP-214ENST00000600573 LELP1Q5T871 98 aa13.89□□□□□ -0.19
PNKP-214ENST00000600573 PTTG1IPP53801 180 aa13.88□□□□□ -0.19
PNKP-214ENST00000600573 LINC00242Q5T6M2 205 aa13.88□□□□□ -0.19
PNKP-214ENST00000600573 TRAV13-1A0A0B4J241 112 aa13.87□□□□□ -0.19
PNKP-214ENST00000600573 SPINK8P0C7L1 97 aa13.87□□□□□ -0.19
PNKP-214ENST00000600573 B9D2Q9BPU9 175 aa13.87□□□□□ -0.19
PNKP-214ENST00000600573 DEFB131BA0A096LNP1 70 aa13.86□□□□□ -0.19
PNKP-214ENST00000600573 TMEM262E9PQX1 116 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms