RNA–Protein interactions for RNA: ENST00000599846.5

ARHGEF1-219, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARHGEF1, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-219ENST00000599846 UBE2D4Q9Y2X8 147 aa11.51□□□□□ -0.57
ARHGEF1-219ENST00000599846 FLNAP21333 2647 aaKnown RBP11.51□□□□□ -0.57
ARHGEF1-219ENST00000599846 RPL13AP40429 203 aaKnown RBP11.5□□□□□ -0.57
ARHGEF1-219ENST00000599846 Q9H8V8 135 aa11.5□□□□□ -0.57
ARHGEF1-219ENST00000599846 SPANXA1Q9NS26 97 aa11.5□□□□□ -0.57
ARHGEF1-219ENST00000599846 PYGO1Q9Y3Y4 419 aa11.5□□□□□ -0.57
ARHGEF1-219ENST00000599846 CHCHD7Q9BUK0 85 aa11.5□□□□□ -0.57
ARHGEF1-219ENST00000599846 TMEM262E9PQX1 116 aa11.49□□□□□ -0.57
ARHGEF1-219ENST00000599846 SNCGO76070 127 aa11.49□□□□□ -0.57
ARHGEF1-219ENST00000599846 TEX29Q8N6K0 151 aa11.49□□□□□ -0.57
ARHGEF1-219ENST00000599846 ICOSQ9Y6W8 199 aa11.49□□□□□ -0.57
ARHGEF1-219ENST00000599846 NIPBLQ6KC79 2804 aaeCLIP11.49□□□□□ -0.57
ARHGEF1-219ENST00000599846 TOMM7Q9P0U1 55 aa11.48□□□□□ -0.57
ARHGEF1-219ENST00000599846 DEFB114Q30KQ6 69 aa11.48□□□□□ -0.57
ARHGEF1-219ENST00000599846 TRGV2A0A075B6R0 118 aa11.48□□□□□ -0.57
ARHGEF1-219ENST00000599846 TINCRA0A1B0GVN0 87 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 RPL35AP18077 110 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 RPL36AP83881 106 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 PRIMA1Q86XR5 153 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 RPL36ALQ969Q0 106 aaKnown RBP11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 UBE2L6O14933 153 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 ANAPC13Q9BS18 74 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 TRAV8-4A0A0B4J246 113 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 MIAQ16674 131 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 ZFAND6Q6FIF0 208 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 Q6ZTI0 123 aa11.47□□□□□ -0.57
ARHGEF1-219ENST00000599846 NOP10Q9NPE3 64 aaKnown RBP11.46□□□□□ -0.57
ARHGEF1-219ENST00000599846 YAE1D1Q9NRH1 226 aa11.46□□□□□ -0.57
ARHGEF1-219ENST00000599846 USP24Q9UPU5 2620 aa11.46□□□□□ -0.57
ARHGEF1-219ENST00000599846 TRAV26-1A0A087WT03 109 aa11.46□□□□□ -0.58
ARHGEF1-219ENST00000599846 COX6A2Q02221 97 aa11.45□□□□□ -0.58
ARHGEF1-219ENST00000599846 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
ARHGEF1-219ENST00000599846 TMEM101Q96IK0 257 aa11.45□□□□□ -0.58
ARHGEF1-219ENST00000599846 ITPR3Q14573 2671 aa11.45□□□□□ -0.58
ARHGEF1-219ENST00000599846 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
ARHGEF1-219ENST00000599846 GAGE2EQ4V326 116 aa11.45□□□□□ -0.58
ARHGEF1-219ENST00000599846 GAGE2DQ9UEU5 116 aa11.45□□□□□ -0.58
ARHGEF1-219ENST00000599846 LINC00694P0DN24 101 aa11.44□□□□□ -0.58
ARHGEF1-219ENST00000599846 GAGE7O76087 117 aa11.44□□□□□ -0.58
ARHGEF1-219ENST00000599846 GAGE12FP0CL80 117 aa11.44□□□□□ -0.58
ARHGEF1-219ENST00000599846 GAGE12GP0CL81 117 aa11.44□□□□□ -0.58
ARHGEF1-219ENST00000599846 GAGE12IP0CL82 117 aa11.44□□□□□ -0.58
ARHGEF1-219ENST00000599846 C4orf3Q8WVX3 66 aa11.44□□□□□ -0.58
ARHGEF1-219ENST00000599846 FAM104AQ969W3 186 aa11.44□□□□□ -0.58
ARHGEF1-219ENST00000599846 TRBV10-2A0A0K0K1G8 114 aa11.43□□□□□ -0.58
ARHGEF1-219ENST00000599846 TTC32Q5I0X7 151 aa11.43□□□□□ -0.58
ARHGEF1-219ENST00000599846 ODF3L2Q3SX64 289 aa11.42□□□□□ -0.58
ARHGEF1-219ENST00000599846 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.42□□□□□ -0.58
ARHGEF1-219ENST00000599846 C11orf72Q8NBR9 251 aa11.42□□□□□ -0.58
ARHGEF1-219ENST00000599846 LITAFQ99732 161 aa11.42□□□□□ -0.58
ARHGEF1-219ENST00000599846 TRBV30A0A0K0K1B3 111 aa11.42□□□□□ -0.58
ARHGEF1-219ENST00000599846 DEFB113Q30KQ7 82 aa11.42□□□□□ -0.58
ARHGEF1-219ENST00000599846 WFDC10AQ9H1F0 79 aa11.42□□□□□ -0.58
ARHGEF1-219ENST00000599846 CCL24O00175 119 aa11.41□□□□□ -0.58
ARHGEF1-219ENST00000599846 DNAJC30Q96LL9 226 aa11.41□□□□□ -0.58
ARHGEF1-219ENST00000599846 A0A096LNT2 108 aa11.41□□□□□ -0.58
ARHGEF1-219ENST00000599846 RNF183Q96D59 192 aa11.41□□□□□ -0.58
ARHGEF1-219ENST00000599846 HERVK_113P63121 156 aa11.41□□□□□ -0.58
ARHGEF1-219ENST00000599846 NBEAL2Q6ZNJ1 2754 aa11.4□□□□□ -0.58
ARHGEF1-219ENST00000599846 SBSPONQ8IVN8 264 aa11.4□□□□□ -0.58
ARHGEF1-219ENST00000599846 TRGV4A0A0C4DH28 118 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 RS1O15537 224 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 C15orf53Q8NAA6 179 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 TRAV4A0A0B4J268 109 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 H7C423 109 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 LINC00242Q5T6M2 205 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 C1orf158Q8N1D5 194 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 SPANXCQ9NY87 97 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 GAGE6Q13070 117 aa11.39□□□□□ -0.59
ARHGEF1-219ENST00000599846 K7EQD1 137 aa11.38□□□□□ -0.59
ARHGEF1-219ENST00000599846 CITED2Q99967 270 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-219ENST00000599846 C11orf68Q9H3H3 251 aaKnown RBP11.38□□□□□ -0.59
ARHGEF1-219ENST00000599846 CRLF1O75462 422 aa11.38□□□□□ -0.59
ARHGEF1-219ENST00000599846 BBC3Q96PG8 261 aaPredicted RBP11.38□□□□□ -0.59
ARHGEF1-219ENST00000599846 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
ARHGEF1-219ENST00000599846 PLA2G2AP14555 144 aa11.37□□□□□ -0.59
ARHGEF1-219ENST00000599846 HIST2H2BCQ6DN03 193 aa11.37□□□□□ -0.59
ARHGEF1-219ENST00000599846 RNF152Q8N8N0 203 aa11.37□□□□□ -0.59
ARHGEF1-219ENST00000599846 LINC00308Q8TCZ7 52 aa11.37□□□□□ -0.59
ARHGEF1-219ENST00000599846 CHCHD5Q9BSY4 110 aa11.37□□□□□ -0.59
ARHGEF1-219ENST00000599846 PIK3CD-AS1Q5SR53 167 aa11.37□□□□□ -0.59
ARHGEF1-219ENST00000599846 WFDC11Q8NEX6 87 aa11.36□□□□□ -0.59
ARHGEF1-219ENST00000599846 NDUFA1O15239 70 aa11.36□□□□□ -0.59
ARHGEF1-219ENST00000599846 IFITM1P13164 125 aa11.36□□□□□ -0.59
ARHGEF1-219ENST00000599846 GCN1Q92616 2671 aaKnown RBP11.36□□□□□ -0.59
ARHGEF1-219ENST00000599846 APCP25054 2843 aa11.36□□□□□ -0.59
ARHGEF1-219ENST00000599846 CLUHP3Q96NS8 147 aa11.36□□□□□ -0.59
ARHGEF1-219ENST00000599846 DNAJC9-AS1A6NH13 148 aa11.35□□□□□ -0.59
ARHGEF1-219ENST00000599846 DEFB130BP0DP73 79 aa11.35□□□□□ -0.59
ARHGEF1-219ENST00000599846 DEFB130AP0DP74 79 aa11.35□□□□□ -0.59
ARHGEF1-219ENST00000599846 TMEM243Q9BU79 118 aa11.35□□□□□ -0.59
ARHGEF1-219ENST00000599846 TIRAPP58753 221 aa11.35□□□□□ -0.59
ARHGEF1-219ENST00000599846 BEAN1Q3B7T3 259 aa11.35□□□□□ -0.59
ARHGEF1-219ENST00000599846 LINC00158P58513 81 aa11.34□□□□□ -0.59
ARHGEF1-219ENST00000599846 NTM-AS1Q6ZSK4 140 aa11.34□□□□□ -0.59
ARHGEF1-219ENST00000599846 SETXQ7Z333 2677 aaKnown RBP11.34□□□□□ -0.59
ARHGEF1-219ENST00000599846 EDA2RQ9HAV5 297 aa11.33□□□□□ -0.6
ARHGEF1-219ENST00000599846 FSHBP01225 129 aa11.33□□□□□ -0.6
ARHGEF1-219ENST00000599846 PFN2P35080 140 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms