RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 LINC01546A6NGU7 62 aa5.58□□□□□ -1.52
VRK3-211ENST00000596445 PSCAO43653 123 aa5.58□□□□□ -1.52
VRK3-211ENST00000596445 G0S2P27469 103 aa5.58□□□□□ -1.52
VRK3-211ENST00000596445 RPL39P62891 51 aaKnown RBP5.58□□□□□ -1.52
VRK3-211ENST00000596445 CLPSL2Q6UWE3 100 aa5.58□□□□□ -1.52
VRK3-211ENST00000596445 C18orf32Q8TCD1 76 aa5.58□□□□□ -1.52
VRK3-211ENST00000596445 TRAV8-4A0A0B4J246 113 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 TRGC2P03986 189 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 TNP2Q05952 138 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 FA2HQ7L5A8 372 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 ZNF664Q8N3J9 261 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 C1orf43Q9BWL3 253 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 CDC42SE2Q9NRR3 84 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 SPANXA1Q9NS26 97 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 CYSLTR1Q9Y271 337 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 PYGO1Q9Y3Y4 419 aa5.57□□□□□ -1.52
VRK3-211ENST00000596445 LINC00614P0C842 121 aa5.56□□□□□ -1.52
VRK3-211ENST00000596445 MRPS36P82909 103 aaKnown RBP5.56□□□□□ -1.52
VRK3-211ENST00000596445 C2orf66Q6UXQ4 117 aa5.56□□□□□ -1.52
VRK3-211ENST00000596445 PKHD1P08F94 4074 aa5.56□□□□□ -1.52
VRK3-211ENST00000596445 PKD1P98161 4303 aa5.56□□□□□ -1.52
VRK3-211ENST00000596445 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 A0A087WTM6 91 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 IGKV3OR2-268A0A0C4DH90 116 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 A0A1B0GVY2 172 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 LRCOL1A6NCL2 159 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 LINC01549A6NIU2 74 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 RAB5BP61020 215 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 Q6ZUT4 128 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 MAPKAPK5-AS1Q8N8E1 139 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 FAM104AQ969W3 186 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 TOMM6Q96B49 74 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 AP5S1Q9NUS5 200 aa5.55□□□□□ -1.52
VRK3-211ENST00000596445 LINC00959A0A1B0GUT2 108 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 IGIPA6NJ69 53 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 EREGO14944 169 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 CCL25O15444 150 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 NPSP0C0P6 89 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 RNASE13Q5GAN3 156 aaKnown RBP5.54□□□□□ -1.52
VRK3-211ENST00000596445 KRTAP26-1Q6PEX3 210 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 URB1-AS1Q96HZ7 61 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 TMEM141Q96I45 108 aa5.54□□□□□ -1.52
VRK3-211ENST00000596445 OPRPNQ99935 248 aaPredicted RBP5.54□□□□□ -1.52
VRK3-211ENST00000596445 IGLV4-3A0A075B6K6 122 aa5.53□□□□□ -1.52
VRK3-211ENST00000596445 C1orf196B1AJZ1 125 aa5.53□□□□□ -1.52
VRK3-211ENST00000596445 SS18Q15532 418 aa5.53□□□□□ -1.52
VRK3-211ENST00000596445 ERASQ7Z444 233 aa5.53□□□□□ -1.52
VRK3-211ENST00000596445 BAGE3Q86Y29 109 aa5.53□□□□□ -1.52
VRK3-211ENST00000596445 BAALCQ8WXS3 180 aa5.53□□□□□ -1.52
VRK3-211ENST00000596445 CHCHD10Q8WYQ3 142 aaPredicted RBP5.53□□□□□ -1.52
VRK3-211ENST00000596445 CHCHD1Q96BP2 118 aaKnown RBP5.53□□□□□ -1.52
VRK3-211ENST00000596445 TIMM17AQ99595 171 aa5.53□□□□□ -1.52
VRK3-211ENST00000596445 TRAV13-1A0A0B4J241 112 aa5.52□□□□□ -1.53
VRK3-211ENST00000596445 GAGE12HA6NDE8 117 aa5.52□□□□□ -1.53
VRK3-211ENST00000596445 LECT2O14960 151 aa5.52□□□□□ -1.53
VRK3-211ENST00000596445 WFDC2Q14508 124 aa5.52□□□□□ -1.53
VRK3-211ENST00000596445 PAPPA-AS1Q5QFB9 102 aa5.52□□□□□ -1.53
VRK3-211ENST00000596445 Q6ZN92 141 aa5.52□□□□□ -1.53
VRK3-211ENST00000596445 SCGB3A1Q96QR1 104 aa5.52□□□□□ -1.53
VRK3-211ENST00000596445 DNAH11Q96DT5 4516 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 A0A096LNJ9 63 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 IFITM10A6NMD0 228 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 HBDP02042 147 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 XCL1P47992 114 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 FOXI1Q12951 378 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 PMCHL1Q16048 86 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 CD164L2Q6UWJ8 174 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 TEX43Q6ZNM6 134 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 SPATA12Q7Z6I5 190 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 Q8N814 137 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 AMELXQ99217 191 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 VCX2Q9H322 139 aa5.51□□□□□ -1.53
VRK3-211ENST00000596445 USP17L23D6RBM5 183 aa5.5□□□□□ -1.53
VRK3-211ENST00000596445 KRTAP10-2P60368 255 aa5.5□□□□□ -1.53
VRK3-211ENST00000596445 C14orf177Q52M58 125 aa5.5□□□□□ -1.53
VRK3-211ENST00000596445 LINC00173Q6ZV60 143 aa5.5□□□□□ -1.53
VRK3-211ENST00000596445 C2orf88Q9BSF0 95 aa5.5□□□□□ -1.53
VRK3-211ENST00000596445 PGPEP1Q9NXJ5 209 aa5.5□□□□□ -1.53
VRK3-211ENST00000596445 EPPK1P58107 5090 aaKnown RBP5.49□□□□□ -1.53
VRK3-211ENST00000596445 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HSBP1O75506 76 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 SERF1AO75920 110 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 UBE2D1P51668 147 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 PDZD11Q5EBL8 140 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
VRK3-211ENST00000596445 ZC2HC1BQ5TFG8 222 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 CDPF1Q6NVV7 123 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 CFAP161Q6P656 301 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 NTN5Q8WTR8 489 aaPredicted RBP5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BHQ93079 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BNQ99877 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 HIST1H2BMQ99879 126 aa5.49□□□□□ -1.53
VRK3-211ENST00000596445 COX7A2LO14548 114 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms