RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 I3L3M4 83 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 CIDEAO60543 219 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 DPM2O94777 84 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 TSHBP01222 138 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 IGKCP01834 107 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 COX8AP10176 69 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 HTN3P15516 51 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 EMP1P54849 157 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 ANKRD39Q53RE8 183 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 SLC25A34Q6PIV7 304 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 NEGR1Q7Z3B1 354 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 TMEM141Q96I45 108 aa8.9□□□□□ -0.98
SCAF1-202ENST00000595242 F8VRH5 84 aa8.89□□□□□ -0.99
SCAF1-202ENST00000595242 J3QL48 77 aa8.89□□□□□ -0.99
SCAF1-202ENST00000595242 BAALCQ8WXS3 180 aa8.89□□□□□ -0.99
SCAF1-202ENST00000595242 HHLA3Q9XRX5 114 aa8.89□□□□□ -0.99
SCAF1-202ENST00000595242 IGHV3OR16-12A0A075B7B8 117 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 TRAV4A0A0B4J268 109 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 DLEU1O43261 78 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 FGF6P10767 208 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 PLNP26678 52 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 Q6ZSN1 163 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 C20orf203Q8NBC4 194 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 ZNRF2Q8NHG8 242 aa8.88□□□□□ -0.99
SCAF1-202ENST00000595242 MRPL35Q9NZE8 188 aaKnown RBP8.88□□□□□ -0.99
SCAF1-202ENST00000595242 NPSP0C0P6 89 aa8.87□□□□□ -0.99
SCAF1-202ENST00000595242 XGP55808 180 aa8.87□□□□□ -0.99
SCAF1-202ENST00000595242 RRN3P1Q2M238 152 aa8.87□□□□□ -0.99
SCAF1-202ENST00000595242 TRGV1A0A0A0MS02 117 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 IGHV3-73A0A0B4J1V6 119 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 TRBV10-1A0A0K0K1A3 114 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 Q6ZTI0 123 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 BOD1L2Q8IYS8 172 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 OR4C5Q8NGB2 326 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
SCAF1-202ENST00000595242 TNFRSF18Q9Y5U5 241 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 HMCN2Q8NDA2 5059 aa8.86□□□□□ -0.99
SCAF1-202ENST00000595242 FAM222AQ5U5X8 452 aa8.85□□□□□ -0.99
SCAF1-202ENST00000595242 LINC00612Q8N6U2 182 aa8.85□□□□□ -0.99
SCAF1-202ENST00000595242 STPG4Q8N801 248 aa8.85□□□□□ -0.99
SCAF1-202ENST00000595242 C15orf53Q8NAA6 179 aa8.85□□□□□ -0.99
SCAF1-202ENST00000595242 PYGO1Q9Y3Y4 419 aa8.85□□□□□ -0.99
SCAF1-202ENST00000595242 SMIM9A6NGZ8 99 aa8.84□□□□□ -0.99
SCAF1-202ENST00000595242 SIVA1O15304 175 aa8.84□□□□□ -0.99
SCAF1-202ENST00000595242 CRYBA4P53673 196 aa8.84□□□□□ -0.99
SCAF1-202ENST00000595242 RPL39P62891 51 aaKnown RBP8.84□□□□□ -0.99
SCAF1-202ENST00000595242 PMVKQ15126 192 aa8.84□□□□□ -0.99
SCAF1-202ENST00000595242 PAPPA-AS1Q5QFB9 102 aa8.84□□□□□ -0.99
SCAF1-202ENST00000595242 C2orf91Q6ZV80 131 aa8.84□□□□□ -0.99
SCAF1-202ENST00000595242 ZNF479Q96JC4 524 aa8.84□□□□□ -0.99
SCAF1-202ENST00000595242 TEX48A0A1B0GUV7 120 aa8.83□□□□□ -1
SCAF1-202ENST00000595242 K7EQD1 137 aa8.83□□□□□ -1
SCAF1-202ENST00000595242 ZC2HC1BQ5TFG8 222 aa8.83□□□□□ -1
SCAF1-202ENST00000595242 NOP10Q9NPE3 64 aaKnown RBP8.83□□□□□ -1
SCAF1-202ENST00000595242 IGLV4-69A0A075B6H9 119 aa8.82□□□□□ -1
SCAF1-202ENST00000595242 CHCHD7Q9BUK0 85 aa8.82□□□□□ -1
SCAF1-202ENST00000595242 CST9LQ9H4G1 147 aa8.82□□□□□ -1
SCAF1-202ENST00000595242 TP73-AS1Q9UF72 201 aa8.82□□□□□ -1
SCAF1-202ENST00000595242 IGKV2D-26A0A0A0MRZ7 120 aa8.81□□□□□ -1
SCAF1-202ENST00000595242 TRBV6-4A0A1B0GX49 114 aa8.81□□□□□ -1
SCAF1-202ENST00000595242 SMR3BP02814 79 aaPredicted RBP8.81□□□□□ -1
SCAF1-202ENST00000595242 CCL18P55774 89 aa8.81□□□□□ -1
SCAF1-202ENST00000595242 NFE4Q86UQ8 179 aa8.81□□□□□ -1
SCAF1-202ENST00000595242 SPANXA1Q9NS26 97 aa8.81□□□□□ -1
SCAF1-202ENST00000595242 Q9UF83 564 aa8.81□□□□□ -1
SCAF1-202ENST00000595242 IGLV4-3A0A075B6K6 122 aa8.8□□□□□ -1
SCAF1-202ENST00000595242 TRBV7-3A0A075B6L6 115 aa8.8□□□□□ -1
SCAF1-202ENST00000595242 RPL36AP83881 106 aaKnown RBP8.8□□□□□ -1
SCAF1-202ENST00000595242 COTL1Q14019 142 aa8.8□□□□□ -1
SCAF1-202ENST00000595242 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
SCAF1-202ENST00000595242 RPL36ALQ969Q0 106 aaKnown RBP8.8□□□□□ -1
SCAF1-202ENST00000595242 TIMM21Q9BVV7 248 aa8.8□□□□□ -1
SCAF1-202ENST00000595242 HIGD1BQ9P298 99 aa8.8□□□□□ -1
SCAF1-202ENST00000595242 LINC00588Q9Y4M8 146 aa8.8□□□□□ -1
SCAF1-202ENST00000595242 GAGE12BA1L429 117 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 E9PLD3 99 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 GAGE7O76087 117 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 GAGE12FP0CL80 117 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 GAGE12GP0CL81 117 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 GAGE12IP0CL82 117 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 FUSP35637 526 aaKnown RBP eCLIP8.79□□□□□ -1
SCAF1-202ENST00000595242 NMUP48645 174 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 UBE2D3P61077 147 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 DAD1P61803 113 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 UBE2D2P62837 147 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 COL5A1-AS1Q5SY13 56 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 DAZ4Q86SG3 579 aaKnown RBP8.79□□□□□ -1
SCAF1-202ENST00000595242 PCP2Q8IVA1 136 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 FAM104AQ969W3 186 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 AMELXQ99217 191 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 KRTAP1-5Q9BYS1 174 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 DAZ3Q9NR90 486 aaKnown RBP8.79□□□□□ -1
SCAF1-202ENST00000595242 PGPEP1Q9NXJ5 209 aa8.79□□□□□ -1
SCAF1-202ENST00000595242 A0A1B0GV90 55 aa8.78□□□□□ -1
SCAF1-202ENST00000595242 C11orf86A6NJI1 115 aa8.78□□□□□ -1
SCAF1-202ENST00000595242 FAM229AH3BQW9 127 aa8.78□□□□□ -1
SCAF1-202ENST00000595242 LINC00694P0DN24 101 aa8.78□□□□□ -1
SCAF1-202ENST00000595242 SLC25A29Q8N8R3 303 aa8.78□□□□□ -1
SCAF1-202ENST00000595242 DEFB104AQ8WTQ1 72 aa8.78□□□□□ -1
SCAF1-202ENST00000595242 Q9H8V8 135 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms