RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CST9LQ9H4G1 147 aa14.4□□□□□ -0.1
PNKP-203ENST00000593946 MRPL35Q9NZE8 188 aaKnown RBP14.4□□□□□ -0.1
PNKP-203ENST00000593946 UBE2L6O14933 153 aa14.39□□□□□ -0.11
PNKP-203ENST00000593946 MRPS36P82909 103 aaKnown RBP14.39□□□□□ -0.11
PNKP-203ENST00000593946 VAMP8Q9BV40 100 aa14.39□□□□□ -0.11
PNKP-203ENST00000593946 F8VRH5 84 aa14.38□□□□□ -0.11
PNKP-203ENST00000593946 SMAGPQ0VAQ4 97 aa14.38□□□□□ -0.11
PNKP-203ENST00000593946 AMELXQ99217 191 aa14.38□□□□□ -0.11
PNKP-203ENST00000593946 Q6ZUT4 128 aa14.38□□□□□ -0.11
PNKP-203ENST00000593946 CHCHD5Q9BSY4 110 aa14.38□□□□□ -0.11
PNKP-203ENST00000593946 VCX2Q9H322 139 aa14.38□□□□□ -0.11
PNKP-203ENST00000593946 CHTOPQ9Y3Y2 248 aaKnown RBP14.38□□□□□ -0.11
PNKP-203ENST00000593946 TRAV9-2A0A087WT02 112 aa14.37□□□□□ -0.11
PNKP-203ENST00000593946 DPM2O94777 84 aa14.37□□□□□ -0.11
PNKP-203ENST00000593946 MAJINQ3KP22 176 aa14.37□□□□□ -0.11
PNKP-203ENST00000593946 DDTP30046 118 aa14.36□□□□□ -0.11
PNKP-203ENST00000593946 GAGE6Q13070 117 aa14.36□□□□□ -0.11
PNKP-203ENST00000593946 DGAT2L7PQ6IED9 249 aa14.36□□□□□ -0.11
PNKP-203ENST00000593946 PAM16Q9Y3D7 125 aa14.36□□□□□ -0.11
PNKP-203ENST00000593946 IGKCP01834 107 aa14.35□□□□□ -0.11
PNKP-203ENST00000593946 ZNF25P17030 456 aaPredicted RBP14.35□□□□□ -0.11
PNKP-203ENST00000593946 PLNP26678 52 aa14.35□□□□□ -0.11
PNKP-203ENST00000593946 AMMECR1LQ6DCA0 310 aa14.35□□□□□ -0.11
PNKP-203ENST00000593946 ZNF664Q8N3J9 261 aa14.35□□□□□ -0.11
PNKP-203ENST00000593946 RNASE13Q5GAN3 156 aaKnown RBP14.35□□□□□ -0.11
PNKP-203ENST00000593946 IGLV4-69A0A075B6H9 119 aa14.34□□□□□ -0.11
PNKP-203ENST00000593946 TIRAPP58753 221 aa14.34□□□□□ -0.11
PNKP-203ENST00000593946 OR5A1Q8NGJ0 315 aa14.34□□□□□ -0.11
PNKP-203ENST00000593946 hDV102S1A0JD36 115 aa14.33□□□□□ -0.12
PNKP-203ENST00000593946 LELP1Q5T871 98 aa14.33□□□□□ -0.12
PNKP-203ENST00000593946 LYPD5Q6UWN5 251 aa14.33□□□□□ -0.12
PNKP-203ENST00000593946 CDC42SE2Q9NRR3 84 aa14.33□□□□□ -0.12
PNKP-203ENST00000593946 C14orf144Q96I85 54 aa14.32□□□□□ -0.12
PNKP-203ENST00000593946 TMEM101Q96IK0 257 aa14.32□□□□□ -0.12
PNKP-203ENST00000593946 SPATA45Q537H7 98 aa14.32□□□□□ -0.12
PNKP-203ENST00000593946 HSBP1L1C9JCN9 74 aa14.3□□□□□ -0.12
PNKP-203ENST00000593946 C2orf88Q9BSF0 95 aa14.3□□□□□ -0.12
PNKP-203ENST00000593946 IGLV4-60A0A075B6I1 120 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 A0A1B0GUV1 79 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 NFE4Q86UQ8 179 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 C15orf53Q8NAA6 179 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 C11orf86A6NJI1 115 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 IGLC3P0DOY3 106 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 MPV17L2Q567V2 206 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 STPG4Q8N801 248 aa14.29□□□□□ -0.12
PNKP-203ENST00000593946 FBN3Q75N90 2809 aa14.27□□□□□ -0.12
PNKP-203ENST00000593946 A0A0J9YXV3 536 aa14.27□□□□□ -0.12
PNKP-203ENST00000593946 TMEM262E9PQX1 116 aa14.27□□□□□ -0.12
PNKP-203ENST00000593946 UBE2D1P51668 147 aa14.27□□□□□ -0.12
PNKP-203ENST00000593946 RBX1P62877 108 aa14.27□□□□□ -0.12
PNKP-203ENST00000593946 PRO1933Q9H354 126 aa14.27□□□□□ -0.12
PNKP-203ENST00000593946 CHAC1Q9BUX1 264 aa14.27□□□□□ -0.13
PNKP-203ENST00000593946 ESRGQ1W209 222 aa14.26□□□□□ -0.13
PNKP-203ENST00000593946 ANKRD39Q53RE8 183 aa14.26□□□□□ -0.13
PNKP-203ENST00000593946 TINCRA0A1B0GVN0 87 aa14.24□□□□□ -0.13
PNKP-203ENST00000593946 IGLL5B9A064 214 aa14.24□□□□□ -0.13
PNKP-203ENST00000593946 FAM19A3Q7Z5A8 133 aa14.24□□□□□ -0.13
PNKP-203ENST00000593946 TRAV8-6A0A0B4J262 113 aa14.23□□□□□ -0.13
PNKP-203ENST00000593946 Q8N3U1 123 aa14.23□□□□□ -0.13
PNKP-203ENST00000593946 TRAV13-1A0A0B4J241 112 aa14.21□□□□□ -0.13
PNKP-203ENST00000593946 ZNF22P17026 224 aaPredicted RBP14.21□□□□□ -0.13
PNKP-203ENST00000593946 TMEM170BQ5T4T1 132 aa14.21□□□□□ -0.14
PNKP-203ENST00000593946 LINC00242Q5T6M2 205 aa14.21□□□□□ -0.14
PNKP-203ENST00000593946 TCTAP57738 103 aa14.2□□□□□ -0.14
PNKP-203ENST00000593946 IGKV2D-26A0A0A0MRZ7 120 aa14.19□□□□□ -0.14
PNKP-203ENST00000593946 SEC11AP67812 179 aa14.19□□□□□ -0.14
PNKP-203ENST00000593946 WFDC10BQ8IUB3 73 aa14.19□□□□□ -0.14
PNKP-203ENST00000593946 GEMIN7Q9H840 131 aaKnown RBP14.18□□□□□ -0.14
PNKP-203ENST00000593946 IGLV5-45A0A087WSX0 123 aa14.18□□□□□ -0.14
PNKP-203ENST00000593946 HERVK_113P63121 156 aa14.18□□□□□ -0.14
PNKP-203ENST00000593946 E9PLD3 99 aa14.17□□□□□ -0.14
PNKP-203ENST00000593946 ANGP03950 147 aaKnown RBP14.17□□□□□ -0.14
PNKP-203ENST00000593946 COX6A2Q02221 97 aa14.17□□□□□ -0.14
PNKP-203ENST00000593946 CSMD3Q7Z407 3707 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 IGKV3OR2-268A0A0C4DH90 116 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 TMEM223A0PJW6 202 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 COX8AP10176 69 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 NMUP48645 174 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 HERVK_113P61574 105 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 LINC00269Q8N2A0 174 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 MIEN1Q9BRT3 115 aa14.16□□□□□ -0.14
PNKP-203ENST00000593946 LINC00959A0A1B0GUT2 108 aa14.15□□□□□ -0.14
PNKP-203ENST00000593946 A0A1B0GV90 55 aa14.15□□□□□ -0.14
PNKP-203ENST00000593946 UQCR10Q9UDW1 63 aa14.15□□□□□ -0.14
PNKP-203ENST00000593946 CDKN2A-AS1Q9UH64 79 aa14.15□□□□□ -0.14
PNKP-203ENST00000593946 LINC00588Q9Y4M8 146 aa14.15□□□□□ -0.14
PNKP-203ENST00000593946 NUPR2A6NF83 97 aa14.14□□□□□ -0.15
PNKP-203ENST00000593946 CLPSL2Q6UWE3 100 aa14.14□□□□□ -0.15
PNKP-203ENST00000593946 MRPS16Q9Y3D3 137 aaKnown RBP14.14□□□□□ -0.15
PNKP-203ENST00000593946 CCL18P55774 89 aa14.13□□□□□ -0.15
PNKP-203ENST00000593946 REG3AQ06141 175 aa14.13□□□□□ -0.15
PNKP-203ENST00000593946 SLC25A34Q6PIV7 304 aa14.13□□□□□ -0.15
PNKP-203ENST00000593946 PCP2Q8IVA1 136 aa14.13□□□□□ -0.15
PNKP-203ENST00000593946 DNAH7Q8WXX0 4024 aa14.13□□□□□ -0.15
PNKP-203ENST00000593946 IGHV3-30P01768 117 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 IGHV3-33P01772 117 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 IGHV3-30-3P0DP02 117 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 IGHV3-30-5P0DP03 117 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 PRR34Q9NV39 138 aa14.12□□□□□ -0.15
PNKP-203ENST00000593946 TP73-AS1Q9UF72 201 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms